Protein Cell All Journals

Mar 2023, Volume 14 Issue 3

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  • RECOLLECTION
    Fan-lan Tai: a pioneer of plant pathology and mycology in China
    Yejing Ge
  • COMMENTARY
    Determiners of cell fates: the tricarboxylic acid cycle versus the citrate-malate shuttle
    Dong Guo, Haiyan He, Ying Meng, Shudi Luo, Zhimin Lu
  • REVIEW
    The engagement of histone lysine methyltransferases with nucleosomes: structural basis, regulatory mechanisms, and therapeutic implications
    Yanjing Li, Kexue Ge, Tingting Li, Run Cai, Yong Chen

    Histone lysine methyltransferases (HKMTs) deposit methyl groups onto lysine residues on histones and play important roles in regulating chromatin structure and gene expression. The structures and functions of HKMTs have been extensively investigated in recent decades, significantly advancing our understanding of the dynamic regulation of histone methylation. Here, we review the recent progress in structural studies of representative HKMTs in complex with nucleosomes (H3K4, H3K27, H3K36, H3K79, and H4K20 methyltransferases), with emphasis on the molecular mechanisms of nucleosome recognition and trans-histone crosstalk by these HKMTs. These structural studies inform HKMTs’ roles in tumorigenesis and provide the foundations for developing new therapeutic approaches targeting HKMTs in cancers.

  • RESEARCH ARTICLE
    Single-cell transcriptomic atlas of mouse cochlear aging
    Guoqiang Sun, Yandong Zheng, Xiaolong Fu, Weiqi Zhang, Jie Ren, Shuai Ma, Shuhui Sun, Xiaojuan He, Qiaoran Wang, Zhejun Ji, Fang Cheng, Kaowen Yan, Ziyi Liu, Juan Carlos Izpisua Belmonte, Jing Qu, Si Wang, Renjie Chai, Guang-Hui Liu

    Progressive functional deterioration in the cochlea is associated with age-related hearing loss (ARHL). However, the cellular and molecular basis underlying cochlear aging remains largely unknown. Here, we established a dynamic single-cell transcriptomic landscape of mouse cochlear aging, in which we characterized aging-associated transcriptomic changes in 27 different cochlear cell types across five different time points. Overall, our analysis pinpoints loss of proteostasis and elevated apoptosis as the hallmark features of cochlear aging, highlights unexpected age-related transcriptional fluctuations in intermediate cells localized in the stria vascularis (SV) and demonstrates that upregulation of endoplasmic reticulum (ER) chaperon protein HSP90AA1 mitigates ER stress-induced damages associated with aging. Our work suggests that targeting unfolded protein response pathways may help alleviate aging-related SV atrophy and hence delay the progression of ARHL.

  • RESEARCH ARTICLE
    4E-BP1 counteracts human mesenchymal stem cell senescence via maintaining mitochondrial homeostasis
    Yifang He, Qianzhao Ji, Zeming Wu, Yusheng Cai, Jian Yin, Yiyuan Zhang, Sheng Zhang, Xiaoqian Liu, Weiqi Zhang, Guang-Hui Liu, Si Wang, Moshi Song, Jing Qu

    Although the mTOR-4E-BP1 signaling pathway is implicated in aging and aging-related disorders, the role of 4E-BP1 in regulating human stem cell homeostasis remains largely unknown. Here, we report that the expression of 4E-BP1 decreases along with the senescence of human mesenchymal stem cells (hMSCs). Genetic inactivation of 4E-BP1 in hMSCs compromises mitochondrial respiration, increases mitochondrial reactive oxygen species (ROS) production, and accelerates cellular senescence. Mechanistically, the absence of 4E-BP1 destabilizes proteins in mitochondrial respiration complexes, especially several key subunits of complex III including UQCRC2. Ectopic expression of 4E-BP1 attenuates mitochondrial abnormalities and alleviates cellular senescence in 4E-BP1- deficient hMSCs as well as in physiologically aged hMSCs. These findings together demonstrate that 4E-BP1 functions as a geroprotector to mitigate human stem cell senescence and maintain mitochondrial homeostasis, particularly for the mitochondrial respiration complex III, thus providing a new potential target to counteract human stem cell senescence.

  • LETTER
    Gαi1/3 mediation of Akt-mTOR activation is important for RSPO3-induced angiogenesis
    Gang Xu, Li-na Qi, Mei-qing Zhang, Xue-yun Li, Jin-long Chai, Zhi-qing Zhang, Xia Chen, Qian Wang, Ke-ran Li, Cong Cao
  • LETTER
    YME1L overexpression exerts pro-tumorigenic activity in glioma by promoting Gαi1 expression and Akt activation
    Fang Liu, Gang Chen, Li-Na Zhou, Yin Wang, Zhi-qing Zhang, Xihu Qin, Cong Cao
  • LETTER
    Suppression of USP8 sensitizes cells to ferroptosis via SQSTM1/p62-mediated ferritinophagy
    Lihong Liu, Birong Zheng, Manhui Luo, Jie Du, Fang Yang, Chuanxin Huang, Zengyi Ma, Chunmei Li, Deyin Guo, Hong Peng