2024-05-20 2024, Volume 14 Issue 5

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  • RESEARCH ARTICLE
    De-Zhen Guo , Ao Huang , Ying-Chao Wang , Shuang Zhou , Hui Wang , Xiang-Lei Xing , Shi-Yu Zhang , Jian-Wen Cheng , Ke-Hui Xie , Qi-Chang Yang , Cheng-Cheng Ma , Qing Li , Yan Chen , Zhi-Xi Su , Jia Fan , Rui Liu , Xiao-Long Liu , Jian Zhou , Xin-Rong Yang
    2024, 14(5): e1652. https://doi.org/10.1002/ctm2.1652

    Background: Early diagnosis of hepatocellular carcinoma (HCC) can significantly improve patient survival. We aimed to develop a blood-based assay to aid in the diagnosis, detection and prognostic evaluation of HCC.

    Methods: A three-phase multicentre study was conducted to screen, optimise and validate HCC-specific differentially methylated regions (DMRs) using next-generation sequencing and quantitative methylation-specific PCR (qMSP).

    Results: Genome-wide methylation profiling was conducted to identify DMRs distinguishing HCC tumours from peritumoural tissues and healthy plasmas. The twenty most effective DMRs were verified and incorporated into a multilocus qMSP assay (HepaAiQ). The HepaAiQ model was trained to separate 293 HCC patients (Barcelona Clinic Liver Cancer (BCLC) stage 0/A, 224) from 266 controls including chronic hepatitis B (CHB) or liver cirrhosis (LC) (CHB/LC, 96), benign hepatic lesions (BHL, 23), and healthy controls (HC, 147). The model achieved an area under the curve (AUC) of 0.944 with a sensitivity of 86.0% in HCC and a specificity of 92.1% in controls. Blind validation of the HepaAiQ model in a cohort of 523 participants resulted in an AUC of 0.940 with a sensitivity of 84.4% in 205 HCC cases (BCLC stage 0/A, 167) and a specificity of 90.3% in 318 controls (CHB/LC, 100; BHL, 102; HC, 116). When evaluated in an independent test set, the HepaAiQ model exhibited a sensitivity of 70.8% in 65 HCC patients at BCLC stage 0/A and a specificity of 89.5% in 124 patients with CHB/LC. Moreover, HepaAiQ model was assessed in paired pre- and postoperative plasma samples from 103 HCC patients and correlated with 2-year patient outcomes. Patients with high postoperative HepaAiQ score showed a higher recurrence risk (Hazard ratio, 3.33, p < .001).

    Conclusions: HepaAiQ, a noninvasive qMSP assay, was developed to accurately measure HCC-specific DMRs and shows great potential for the diagnosis, detection and prognosis of HCC, benefiting at-risk populations.

  • RESEARCH ARTICLE
    Wout De Wispelaere , Daniela Annibali , Sandra Tuyaerts , Julie Messiaen , Asier Antoranz , Gautam Shankar , Nikolina Dubroja , Alejandro Herreros-Pomares , Regina E. M. Baiden-Amissah , Marie-Pauline Orban , Marcello Delfini , Emanuele Berardi , Thomas Van Brussel , Rogier Schepers , Gino Philips , Bram Boeckx , Maria Francesca Baietti , Luigi Congedo , Kiave Yune HoWangYin , Emilie Bayon , Anne-Sophie Van Rompuy , Eleonora Leucci , Sebastien P. Tabruyn , Francesca Bosisio , Massimiliano Mazzone , Diether Lambrechts , Frédéric Amant
    2024, 14(5): e1655. https://doi.org/10.1002/ctm2.1655

    Background: Uterine leiomyosarcomas (uLMS) are aggressive tumours with poor prognosis and limited treatment options. Although immune checkpoint blockade (ICB) has proven effective in some ‘challenging-to-treat’ cancers, clinical trials showed that uLMS do not respond to ICB. Emerging evidence suggests that aberrant PI3K/mTOR signalling can drive resistance to ICB. We therefore explored the relevance of the PI3K/mTOR pathway for ICB treatment in uLMS and explored pharmacological inhibition of this pathway to sensitise these tumours to ICB.

    Methods: We performed an integrated multiomics analysis based on TCGA data to explore the correlation between PI3K/mTOR dysregulation and immune infiltration in 101 LMS. We assessed response to PI3K/mTOR inhibitors in immunodeficient and humanized uLMS patient-derived xenografts (PDXs) by evaluating tumour microenvironment modulation using multiplex immunofluorescence. We explored response to single-agent and a combination of PI3K/mTOR inhibitors with PD-1 blockade in humanized uLMS PDXs. We mapped intratumoural dynamics using single-cell RNA/TCR sequencing of serially collected biopsies.

    Results: PI3K/mTOR over-activation (pS6high) associated with lymphocyte depletion and wound healing immune landscapes in (u)LMS, suggesting it contributes to immune evasion. In contrast, PI3K/mTOR inhibition induced profound tumour microenvironment remodelling in an ICB-resistant humanized uLMS PDX model, fostering adaptive anti-tumour immune responses. Indeed, PI3K/mTOR inhibition induced macrophage repolarisation towards an anti-tumourigenic phenotype and increased antigen presentation on dendritic and tumour cells, but also promoted infiltration of PD-1+ T cells displaying an exhausted phenotype. When combined with anti-PD-1, PI3K/mTOR inhibition led to partial or complete tumour responses, whereas no response to single-agent anti-PD-1 was observed. Combination therapy reinvigorated exhausted T cells and induced clonal hyper-expansion of a cytotoxic CD8+ T-cell population supported by a CD4+ Th1 niche.

    Conclusions: Our findings indicate that aberrant PI3K/mTOR pathway activation contributes to immune escape in uLMS and provides a rationale for combining PI3K/mTOR inhibition with ICB for the treatment of this patient population.

  • RESEARCH ARTICLE
    Yun Zhong , Lei Zhou , Yi Guo , Fan Wang , Fanping He , Yufan Cheng , Xin Meng , Hongfu Xie , Yiya Zhang , Ji Li
    2024, 14(5): e1660. https://doi.org/10.1002/ctm2.1660

    Background: Human dermal fibroblasts (HDFs) are essential in the processes of skin ageing and wound healing. However, the underlying mechanism of HDFs in skin healing of the elderly has not been well defined. This study aims to elucidate the mechanisms of HDFs senescence and how senescent HDFs affect wound healing in aged skin.

    Methods: The expression and function of sperm equatorial segment protein 1 (SPESP1) in skin ageing were evaluated via in vivo and in vitro experiments. To delve into the potential molecular mechanisms by which SPESP1 influences skin ageing, a combination of techniques was employed, including proteomics, RNA sequencing, immunoprecipitation, chromatin immunoprecipitation and liquid chromatography-mass spectrometry analyses. Clearance of senescent cells by dasatinib plus quercetin (D+Q) was investigated to explore the role of SPESP1-induced senescent HDFs in wound healing.

    Results: Here, we define the critical role of SPESP1 in ameliorating HDFs senescence and retarding the skin ageing process. Mechanistic studies demonstrate that SPESP1 directly binds to methyl-binding protein, leading to Decorin demethylation and subsequently upregulation of its expression. Moreover, SPESP1 knockdown delays wound healing in young mice and SPESP1 overexpression induces wound healing in old mice. Notably, pharmacogenetic clearance of senescent cells by D+Q improved wound healing in SPESP1 knockdown skin.

    Conclusions: Taken together, these findings reveal the critical role of SPESP1 in skin ageing and wound healing, expecting to facilitate the development of anti-ageing strategies and improve wound healing in the elderly.

  • RESEARCH ARTICLE
    Pamela Leland , Heba Degheidy , Ashley Lea , Steven R. Bauer , Raj K. Puri , Bharat H. Joshi
    2024, 14(5): e1664. https://doi.org/10.1002/ctm2.1664

    Background: Previously, we discovered that human solid tumours, but not normal human tissues, preferentially overexpress interleukin-13Receptor alpha2, a high binding receptor for IL-13. To develop novel anti-cancer approaches, we constructed a chimeric antigen receptor construct using a high binding and codon optimised scFv-IL-13Rα2 fragment fused with CD3ζ and co-stimulatory cytoplasmic domains of CD28 and 4-1BB.

    Methods: We developed a scFv clone, designated 14-1, by biopanning the bound scFv phages using huIL-13Rα2Fc chimeric protein and compared its binding with our previously published clone 4-1. We performed bioinformatic analyses for complementary determining regions (CDR) framework and residue analyses of the light and heavy chains. This construct was packaged with helper plasmids to produce CAR-lentivirus and transduced human Jurkat T or activated T cells from peripheral blood mononuclear cells (PBMCs) to produce CAR-T cells and tested for their quality attributes in vitro and in vivo. Serum enzymes including body weight from non-tumour bearing mice were tested for assessing general toxicity of CAR-T cells.

    Results: The binding of 14-1 clone is to IL-13Rα2Fc-chimeric protein is ∼5 times higher than our previous clone 4-1. The 14-1-CAR-T cells grew exponentially in the presence of cytokines and maintained phenotype and biological attributes such as cell viability, potency, migration and T cell activation. Clone 14-1 migrated to IL-13Rα2Fc and cell free supernatants only from IL-13Rα2+ve confluent glioma tumour cells in a chemotaxis assay. scFv-IL-13Rα2-CAR-T cells specifically killed IL-13Rα2+ve but not IL-13Rα2-ve tumour cells in vitro and selectively caused significant release of IFN-γ only from IL-13Rα2+ve co-cultures. These CAR-T cells regressed IL-13Rα2+ve glioma xenografts in vivo without any general toxicity. In contrast, the IL-13Rα2 gene knocked-down U251 and U87 xenografts failed to respond to the CAR-T therapy.

    Conclusion: Taken together, we conclude that the novel scFv-IL-13Rα2 CAR-T cell therapy may offer an effective therapeutic option after designing a careful pre-clinical and clinical study.

  • LETTER TO THE JOURNAL
    Junjie Huang , Yat Ching Fung , Wing Sze Pang , Sze Chai Chan , Veeleah Lok , Lin Zhang , Xu Lin , Don Eliseo Lucero-Prisno , Wanghong Xu , Zhi-Jie Zheng , Edmar Elcarte , Mellissa Withers , Martin C. S. Wong
    2024, 14(5): e1667. https://doi.org/10.1002/ctm2.1667
  • RESEARCH ARTICLE
    Rachel S. Perkins , Glenn Murray , Sarocha Suthon , Lindsey Davis , Nicholson B. Perkins , Lily Fletcher , Amanda Bozzi , Saylor L. Schreiber , Jianjian Lin , Steven Laxton , Rahul R. Pillai , Alec J. Wright , Gustavo A. Miranda-Carboni , Susan A. Krum
    2024, 14(5): e1670. https://doi.org/10.1002/ctm2.1670

    WNT5B expression is high in osteosarcoma stem cells leading to increased stem cell proliferation and migration through SOX2.

    WNT5B expression in stem cells increases rates of osteosarcoma metastasis to the lungs and liver in vivo.

    The hyaluronic acid degradation enzyme HYAL1 is regulated by WNT5B in osteosarcoma contributing to metastasis.

    Inhibition of WNT5B with a ROR1 antibody decreases osteosarcoma stemness.

  • RESEARCH ARTICLE
    Yuzhou Zhao , Danyang Li , Jing Zhuang , Zhimeng Li , Qingxin Xia , Zhi Li , Juan Yu , Jinbang Wang , Yong Zhang , Ke Li , Shuning Xu , Sen Li , Pengfei Ma , Yanghui Cao , Chenyu Liu , Chunmiao Xu , Zhentian Liu , Jinwang Wei , Chengjuan Zhang , Lei Qiao , Xuan Gao , Zhiguo Hou , Chenxuan Liu , Rongrong Zheng , Du Wang , Ying Liu
    2024, 14(5): e1674. https://doi.org/10.1002/ctm2.1674

    Background: The current standard of care for locally advanced gastric cancer (GC) involves neoadjuvant chemotherapy followed by radical surgery. Recently, neoadjuvant treatment for this condition has involved the exploration of immunotherapy plus chemotherapy as a potential approach. However, the efficacy remains uncertain.

    Methods: A single-arm, phase 2 study was conducted to evaluate the efficacy and tolerability of neoadjuvant camrelizumab combined with mFOLFOX6 and identify potential biomarkers of response through multi-omics analysis in patients with resectable locally advanced GC. The primary endpoint was the pathological complete response (pCR) rate. Secondary endpoints included the R0 rate, near pCR rate, progression-free survival (PFS), disease-free survival (DFS), and overall survival (OS). Multi-omics analysis was assessed by whole-exome sequencing, transcriptome sequencing, and multiplex immunofluorescence (mIF) using biopsies pre- and post-neoadjuvant therapy.

    Results: This study involved 60 patients, of which 55 underwent gastrectomy. Among these, five (9.1%) attained a pathological complete response (pCR), and 11 (20.0%) reached near pCR. No unexpected treatment-emergent adverse events or perioperative mortality were observed, and the regimen presented a manageable safety profile. Molecular changes identified through multi-omics analysis correlated with treatment response, highlighting associations between HER2-positive and CTNNB1 mutations with treatment sensitivity and a favourable prognosis. This finding was further supported by immune cell infiltration analysis and mIF. Expression data uncovered a risk model with four genes (RALYL, SCGN, CCKBR, NTS) linked to poor response. Additionally, post-treatment infiltration of CD8+ T lymphocytes positively correlates with pathological response.

    Conclusion: The findings suggest the combination of PD-1-inhibitor and mFOLFOX6 showed efficacy and acceptable toxicity for locally advanced GC. Extended follow-up is required to determine the duration of the response. This study lays essential groundwork for developing precise neoadjuvant regimens.

  • RESEARCH ARTICLE
    Tian-mei Zeng , Tian-yi Jiang , Guang Yang , Zhuo Cheng , Cheng Lou , Wei Wei , Chen-jie Tao , Shouzi Hu , Hui Wang , Xiao-wen Cui , Ye-xiong Tan , Li-wei Dong , Hong-yang Wang , Zhen-gang Yuan
    2024, 14(5): e1675. https://doi.org/10.1002/ctm2.1675

    • There is a limited strategy for the second-line option of intrahepatic cholangiocarcinoma (ICC).

    • This investigator-initiated phase 2 study evaluated bortezomib in ICC patients with phosphatase and tension homology deficiency.

    • The overall response rate was 18.75% and the overall survival was 7.2 months in the intent-to-treat cohort.

    • These results justify further developing bortezomib in ICC patients with PTEN deficiency.

  • LETTER TO THE JOURNAL
    Ping Yang , Yifan Sun , Chenlan Wang , Zhibo Li , Yiyuan Han , Jianming Gong , Adeel Khan , Jin Wang , Yanbo Wang , Fangfang Jin , Zhiyang Li
    2024, 14(5): e1677. https://doi.org/10.1002/ctm2.1677
  • RESEARCH ARTICLE
    Haozhe Zhang , Yi Zhou , Yating Feng , Wenli Hou , Yafei Chen , Zengzhen Xing , Yifan Zhang , Qiang Wei , Yu Yin , Ju Guo , Hailiang Hu
    2024, 14(5): e1678. https://doi.org/10.1002/ctm2.1678

    • CDK12 deficiency promotes castration-resistant prostate cancer (CRPC) progression by reprogramming cellular metabolism.

    • CDK12 deficiency in CRPC leads to a more active mitochondrial electron transport chain (ETC), ensuring efficient cell energy supply.

    • CDK12 phosphorylates RNA Pol II to ensure the transcription of ACSL4 to regulate ferroptosis.

    • Mitochondrial ETC inhibitors exhibit better selectivity for CDK12-deficient CRPC cells, offering a promising new therapeutic approach for this subtype of CRPC patients.

  • RESEARCH ARTICLE
    Furong Yan , Linlin Zhang , Lian Duan , Liyang Li , Xuanqi Liu , Yifei Liu , Tiankui Qiao , Yiming Zeng , Hao Fang , Duojiao Wu , Xiangdong Wang
    2024, 14(5): e1679. https://doi.org/10.1002/ctm2.1679

    Metabolic abnormalities represent one of the pathological features of chronic obstructive pulmonary disease (COPD). Glutamic pyruvate transaminase 2 (GPT2) is involved in glutamate metabolism and lipid synthesis pathways, whilst the exact roles of GPT2 in the occurrence and development of COPD remains uncertain. This study aims at investigating how GPT2 and the associated genes modulate smoking-induced airway epithelial metabolism and damage by reprogramming lipid synthesis. The circulating or human airway epithelial metabolomic and lipidomic profiles of COPD patients or cell-lines explored with smoking were assessed to elucidate the pivotal roles of GPT2 in reprogramming processes. We found that GPT2 regulate the reprogramming of lipid metabolisms caused by smoking, especially phosphatidylcholine (PC) and triacylglycerol (TAG), along with changes in the expression of lipid metabolism-associated genes. GPT2 modulated cell sensitivities and survival in response to smoking by enhancing mitochondrial functions and maintaining lipid and energy homeostasis. Our findings provide evidence for the involvement of GPT2 in the reprogramming of airway epithelial lipids following smoking, as well as the molecular mechanisms underlying GPT2-mediated regulation, which may offer an alternative of therapeutic strategies for chronic lung diseases.

  • RESEARCH ARTICLE
    Jianqun Wang , Mei Hong , Yang Cheng , Xiaojing Wang , Dan Li , Guo Chen , Banghe Bao , Jiyu Song , Xinyi Du , Chunhui Yang , Liduan Zheng , Qiangsong Tong
    2024, 14(5): e1680. https://doi.org/10.1002/ctm2.1680

    Background: A series of studies have demonstrated the emerging involvement of transfer RNA (tRNA) processing during the progression of tumours. Nevertheless, the roles and regulating mechanisms of tRNA processing genes in neuroblastoma (NB), the prevalent malignant tumour outside the brain in children, are yet unknown.

    Methods: Analysis of multi-omics results was conducted to identify crucial regulators of downstream tRNA processing genes. Co-immunoprecipitation and mass spectrometry methods were utilised to measure interaction between proteins. The impact of transcriptional regulators on expression of downstream genes was measured by dual-luciferase reporter, chromatin immunoprecipitation, western blotting and real-time quantitative reverse transcription-polymerase chain reaction (RT-PCR) methods. Studies have been conducted to reveal impact and mechanisms of transcriptional regulators on biological processes of NB. Survival differences were analysed using the log-rank test.

    Results: c-Myc was identified as a transcription factor driving tRNA processing gene expression and subsequent malate-aspartate shuttle (MAS) in NB cells. Mechanistically, c-Myc directly promoted the expression of glutamyl-prolyl-tRNA synthetase (EPRS) and leucyl-tRNA synthetase (LARS), resulting in translational up-regulation of glutamic-oxaloacetic transaminase 1 (GOT1) as well as malate dehydrogenase 1 (MDH1) via inhibiting general control nonrepressed 2 or activating mechanistic target of rapamycin signalling. Meanwhile, lamin A (LMNA) inhibited c-Myc transactivation via physical interaction, leading to suppression of MAS, aerobic glycolysis, tumourigenesis and aggressiveness. Pre-clinically, lobeline was discovered as a LMNA-binding compound to facilitate its interaction with c-Myc, which inhibited aminoacyl-tRNA synthetase expression, MAS and tumour progression of NB, as well as growth of organoid derived from c-Myc knock-in mice. Low levels of LMNA or elevated expression of c-Myc, EPRS, LARS, GOT1 or MDH1 were linked to a worse outcome and a shorter survival time of clinical NB patients.

    Conclusions: These results suggest that targeting c-Myc transactivation by LMNA inhibits tRNA processing essential for MAS and tumour progression.

  • RESEARCH ARTICLE
    Xinyu Wan , Wenjie Shi , Lingjun Ma , Lexin Wang , Ran Zheng , Jinzhi He , Ye Wang , Xuan Li , Xiaoming Zha , Jue Wang , Lu Xu
    2024, 14(5): e1681. https://doi.org/10.1002/ctm2.1681

    Background: We explored the potential novel anticancer mechanisms of 25-hydroxyvitamin D (25(OH)D), a vitamin D metabolite with antitumour effects in breast cancer. It is stable in serum and is used to assess vitamin D levels in clinical practice. Transfer RNA-derived small RNAs are small noncoding RNAs that generate various distinct biological functions, but more research is needed on their role in breast cancer.

    Methods: Small RNA microarrays were used to explore the novel regulatory mechanism of 25(OH)D. High-throughput RNA-sequencing technology was used to detect transcriptome changes after 25(OH)D treatment and tRF-1-Ser knockdown. RNA pull-down and high-performance liquid chromatography-mass spectrometry/mass spectrometry were used to explore the proteins bound to tRF-1-Ser. In vitro and in vivo functional experiments were conducted to assess the influence of 25(OH)D and tRF-1-Ser on breast cancer. Semi-quantitative PCR was performed to detect alternative splicing events. Western blot assay and qPCR were used to assess protein and mRNA expression.

    Results: The expression of tRF-1-Ser is negatively regulated by 25(OH)D. In our breast cancer (BRCA) clinical samples, we found that the expression of tRF-1-Ser was higher in cancer tissues than in paired normal tissues, and was significantly associated with tumour invasion. Moreover, tRF-1-Ser inhibits the function of MBNL1 by hindering its nuclear translocation. Functional experiments and transcriptome data revealed that the downregulation of tRF-1-Ser plays a vital role in the anticancer effect of 25(OH)D.

    Conclusions: In brief, our research revealed a novel anticancer mechanism of 25(OH)D, unveiled the vital function of tRF-1-Ser in BRCA progression, and suggested that tRF-1-Ser could emerge as a new therapeutic target for BRCA.

  • RESEARCH ARTICLE
    Jing Guo , Yiyuan Chen , Haibo Zhu , Xinyu Tong , Lei Cao , Yazhuo Zhang , Weiyan Xie , Chuzhong Li
    2024, 14(5): e1682. https://doi.org/10.1002/ctm2.1682

    Background: The three-dimensional (3D) genome architecture plays a critical role inregulating gene expression. However, the specific alterations in thisarchitecture within somatotroph tumors and their implications for gene expression remain largely unexplored.

    Methods: We employed Hi-C and RNA-seq analyses to compare the 3D genomic structures of somatotroph tumors with normal pituitary tissue. This comprehensive approachenabled the characterization of A/B compartments, topologically associateddomains (TADs), and chromatin loops, integrating these with gene expression patterns.

    Results: We observed a decrease in both the frequency of chromosomal interactions andthe size of TADs in tumor tissue compared to normal tissue. Conversely, the number of TADs and chromatin loops was found to be increased in tumors. Integrated analysis of Hi-C and RNA-seq data demonstrated that changes inhigher-order chromat in structure were associated with alterations in gene expression. Specifically, genes in A compartments showed higher density and increased expression relative to those in B compartments. Moreover, the weakand enhanced insulation boundaries were identified, and the associated genes were enriched in the Wnt/β-Catenin signaling pathway. We identified the gainedand lost loops in tumor and integrated these differences with transcriptional changes to examine the functional relevance of the identified loops. Notably, we observed an enhanced insulation boundary and a greater number of loops in the TCF7L2 gene region within tumors, which was accompanied by an upregulation of TCF7L2 expression. Subsequently, TCF7L2 expression was confirmed through qRT-PCR, and upregulated TCF7L2 prompted cell proliferation and growth hormone (GH) secretion in vitro.

    Conclusion: Our results provide comprehensive 3D chromatin architecture maps of somatotroph tumors and offer a valuable resource for furthering the understanding of the underlying biology and mechanisms of gene expression regulation.

  • LETTER TO THE JOURNAL
    Jie Huang , Shi-Ling Zhang , Chao Zhang , Weiye Huang , Zhenhua Zhang , Yu-Qing Chen , Jun-Wei Su , Hong-Hong Yan , Hua-Jun Chen , Jin-Ji Yang , Junjian Wang , Yi-Long Wu
    2024, 14(5): e1683. https://doi.org/10.1002/ctm2.1683
  • REVIEW
    Chuanxi Lai , Lingna Xu , Sheng Dai
    2024, 14(5): e1684. https://doi.org/10.1002/ctm2.1684

    • Exportin-1 (XPO1) plays a critical role in mediating nucleocytoplasmic transport and cell cycle.

    • XPO1 dysfunction promotes tumourigenesis and drug resistance within solid tumours.

    • The therapeutic potential and ongoing researches on XPO1 inhibitors in the treatment of solid tumours.

    • Additional researches are essential to address safety concerns and identify biomarkers for predicting patient response to XPO1 inhibitors.

  • RESEARCH ARTICLE
    Dengyuan Feng , Zeping Gui , Zhen Xu , Jianjian Zhang , Bin Ni , Zijie Wang , Jiawen Liu , Shuang Fei , Hao Chen , Li Sun , Min Gu , Ruoyun Tan
    2024, 14(5): e1686. https://doi.org/10.1002/ctm2.1686

    Background: Renal allograft interstitial fibrosis/tubular atrophy (IF/TA) constitutes the principal histopathological characteristic of chronic allograft dysfunction (CAD) in kidney-transplanted patients. While renal vascular endothelial-mesenchymal transition (EndMT) has been verified as an important contributing factor to IF/TA in CAD patients, its underlying mechanisms remain obscure. Through single-cell transcriptomic analysis, we identified Rictor as a potential pivotal mediator for EndMT. This investigation sought to elucidate the role of Rictor/mTORC2 signalling in the pathogenesis of renal allograft interstitial fibrosis and the associated mechanisms.

    Methods: The influence of the Rictor/mTOR2 pathway on renal vascular EndMT and renal allograft fibrosis was investigated by cell experiments and Rictor depletion in renal allogeneic transplantation mice models. Subsequently, a series of assays were conducted to explore the underlying mechanisms of the enhanced mitophagy and the ameliorated EndMT resulting from Rictor knockout.

    Results: Our findings revealed a significant activation of the Rictor/mTORC2 signalling in CAD patients and allogeneic kidney transplanted mice. The suppression of Rictor/mTORC2 signalling alleviated TNFα-induced EndMT in HUVECs. Moreover, Rictor knockout in endothelial cells remarkably ameliorated renal vascular EndMT and allograft interstitial fibrosis in allogeneic kidney transplanted mice. Mechanistically, Rictor knockout resulted in an augmented BNIP3-mediated mitophagy in endothelial cells. Furthermore, Rictor/mTORC2 facilitated the MARCH5-mediated degradation of BNIP3 at the K130 site through K48-linked ubiquitination, thereby regulating mitophagy activity. Subsequent experiments also demonstrated that BNIP3 knockdown nearly reversed the enhanced mitophagy and mitigated EndMT and allograft interstitial fibrosis induced by Rictor knockout.

    Conclusions: Consequently, our study underscores Rictor/mTORC2 signalling as a critical mediator of renal vascular EndMT and allograft interstitial fibrosis progression, exerting its impact through regulating BNIP3-mediated mitophagy. This insight unveils a potential therapeutic target for mitigating renal allograft interstitial fibrosis.

  • RESEARCH ARTICLE
    Xiaochu Man , Jie Huang , Shujuan Sun , Dongdong Zhou , Baoxuan Zhang , Shu Fang , Fangchao Zheng , Chao Li , Xinzhao Wang , Wei Huang , Linlin Wang , Qingqing He , Hui Fu , Yan Zhang , Changrui Liu , Lin Dong , Xianguang Zhao , Liang Xu , Xiao Sun , Bingjie Fan , Lihua Song , Zhengbo Zhou , Jinming Yu , Huihui Li
    2024, 14(5): e1687. https://doi.org/10.1002/ctm2.1687

    Objective: It has been observed that the prognosis of patients with HER2-positive metastatic breast cancer has improved significantly with HER2-targeted agents. However, there is still a lack of evidence regarding first-line anti-HER2 treatment options for patients who have received adjuvant and/or neoadjuvant trastuzumab for HER2-positive metastatic breast cancer. Besides, there are no reliable markers that can predict the efficacy of anti-HER2 treatment in these patients.

    Methods: Patients who have received adjuvant and/or neoadjuvant trastuzumab for HER2-positive metastatic breast cancer were enrolled. Pyrotinib plus albumin-bound paclitaxel were used as first-line treatment. The primary endpoint was the objective response rate (ORR). The safety profile was also assessed. In order to explore predictive biomarkers using Olink technology, blood samples were collected dynamically.

    Results: From December 2019 to August 2023, the first stage of the study involved 27 eligible patients. It has not yet reached the median PFS despite the median follow-up being 17.8 months. Efficacy evaluation showed that the ORR was 92.6%, and the DCR was 100%. Adverse events of grade 3 or higher included diarrhoea (29.6%), leukopenia (11.1%), neutropenia (25.9%), oral mucositis (3.7%), and hand-foot syndrome (3.7%). Toll-like receptor 3 (TLR3) and Proto-oncogene tyrosine-protein kinase receptor (RET) were proteins with significant relevance to PFS in these patients.

    Conclusions: This study demonstrates that pyrotinib plus albumin-bound paclitaxel as a first-line treatment regimen shows good efficacy and manageable safety for patients who have received adjuvant and/or neoadjuvant trastuzumab for HER2-positive metastatic breast cancer. Besides, a significant association was identified between the expression levels of TLR3 and RET and the PFS in patients.

  • RESEARCH ARTICLE
    Ziyan Yan , Jiaojiao Zhu , Yuhao Liu , Zhongqiu Li , Xinxin Liang , Shenghui Zhou , Yifan Hou , Huixi Chen , Lin Zhou , Ping Wang , Xingkun Ao , Shanshan Gao , Xin Huang , Ping-Kun Zhou , Yongqing Gu
    2024, 14(5): e1690. https://doi.org/10.1002/ctm2.1690

    Introduction: Radiation-induced pulmonary fibrosis (RIPF) is a chronic, progressive, irreversible lung interstitial disease that develops after radiotherapy. Although several previous studies have focused on the mechanism of epithelial-mesenchymal transition (EMT) in lung epithelial cells, the essential factors involved in this process remain poorly understood. The DNA-dependent protein kinase catalytic subunit (DNA-PKcs) exhibits strong repair capacity when cells undergo radiation-induced damage; whether DNA-PKcs regulates EMT during RIPF remains unclear.

    Objectives: To investigate the role and molecular mechanism of DNA-PKcs in RIPF and provide an important theoretical basis for utilising DNA-PKcs-targeted drugs for preventing RIPF.

    Methods: DNA-PKcs knockout (DPK−/−) mice were generated via the Cas9/sgRNA technique and subjected to whole chest ionizing radiation (IR) at a 20 Gy dose. Before whole chest IR, the mice were intragastrically administered the DNA-PKcs-targeted drug VND3207. Lung tissues were collected at 1 and 5 months after IR.

    Results: The expression of DNA-PKcs is low in pulmonary fibrosis (PF) patients. DNA-PKcs deficiency significantly exacerbated RIPF by promoting EMT in lung epithelial cells. Mechanistically, DNA-PKcs deletion by shRNA or inhibitor NU7441 maintained the protein stability of Twist1. Furthermore, AKT1 mediated the interaction between DNA-PKcs and Twist1. High Twist1 expression and EMT-associated changes caused by DNA-PKcs deletion were blocked by insulin-like growth factor-1 (IGF-1), an AKT1 agonist. The radioprotective drug VND3207 prevented IR-induced EMT and alleviated RIPF in mice by stimulating the kinase activity of DNA-PKcs.

    Conclusion: Our study clarified the critical role and mechanism of DNA-PKcs in RIPF and showed that it could be a potential target for preventing RIPF.

  • LETTER TO THE JOURNAL
    Se Ik Kim , Hyeyoon Kim , Kisoon Dan , Hong-Beom Park , Cheol Lee , Hee Seung Kim , Hyun Hoon Chung , Jae-Weon Kim , Noh Hyun Park , Dohyun Han , Maria Lee
    2024, 14(5): e1693. https://doi.org/10.1002/ctm2.1693
  • RESEARCH ARTICLE
    Peitao Zhang , Lizhao Guan , Wei Sun , Yu Zhang , Yaying Du , Shukai Yuan , Xiaolong Cao , Zhengquan Yu , Qiang Jia , Xiangqian Zheng , Zhaowei Meng , Xingrui Li , Li Zhao
    2024, 14(5): e1694. https://doi.org/10.1002/ctm2.1694

    Background: BRAFV600E is the most common genetic mutation in differentiated thyroid cancer (DTC) occurring in 60% of patients and drives malignant tumour cell phenotypes including proliferation, metastasis and immune-escape. BRAFV600E-mutated papillary thyroid cancer (PTC) also displays greatly reduced expression of thyroid differentiation markers, thus tendency to radioactive iodine (RAI) refractory and poor prognosis. Therefore, understanding the molecular mechanisms and main oncogenic events underlying BRAFV600E will guide future therapy development.

    Methods: Bioinformatics and clinical specimen analyses, genetic manipulation of BRAFV600E-induced PTC model, functional and mechanism exploration guided with transcriptomic screening, as well as systematic rescue experiments were applied to investigate miR-31 function within BRAFV600E-induced thyroid cancer development. Besides, nanoparticles carrying miR-31 antagomirs were testified to alleviate 131I iodide therapy on PTC models.

    Results: We identify miR-31 as a significantly increased onco-miR in BRAFV600E-associated PTC that promotes tumour progression, metastasis and RAI refractoriness via sustained Wnt/β-catenin signalling. Mechanistically, highly activated BRAF/MAPK pathway induces miR-31 expression via c-Jun-mediated transcriptional regulation across in vitro and transgenic mouse models. MiR-31 in turn facilitates β-catenin stabilisation via directly repressing tumour suppressors CEBPA and DACH1, which direct the expression of multiple essential Wnt/β-catenin pathway inhibitors. Genetic functional assays showed that thyroid-specific knockout of miR-31 inhibited BRAFV600E-induced PTC progression, and strikingly, enhanced expression of sodium-iodide symporter and other thyroid differentiation markers, thus promoted 131I uptake. Nanoparticle-mediated application of anti-miR-31 antagomirs markedly elevated radio-sensitivity of BRAFV600E-induced PTC tumours to 131I therapy, and efficiently suppressed tumour progression in the pre-clinical mouse model.

    Conclusions: Our findings elucidate a novel BRAF/MAPK-miR-31-Wnt/β-catenin regulatory mechanism underlying clinically BRAFV600E-associated DTC tumourigenesis and dedifferentiation, also highlight a potential adjuvant therapeutic strategy for advanced DTC.

  • LETTER TO THE JOURNAL
    Mickayla Bacorn , Poorani Subramanian , Shira Levy , Qing Chen , George L. Maxwell , Suchitra K Hourigan
    2024, 14(5): e1695. https://doi.org/10.1002/ctm2.1695
  • RESEARCH ARTICLE
    Zerui Wang , Cheng Zhen , Xiaoyan Guo , Mengmeng Qu , Chao Zhang , Jinwen Song , Xing Fan , Huihuang Huang , Ruonan Xu , Jiyuan Zhang , Jinhong Yuan , Weiguo Hong , Jiaying Li , Fu-Sheng Wang , Yan-Mei Jiao , Enqiang Linghu
    2024, 14(5): e1699. https://doi.org/10.1002/ctm2.1699

    An investigation was carried out at the single-cell-level to analyze gut mucosal immune cells alterations in PLWH after ART.

    B cells were significantly increased and plasma cells were significantly decreased in the INRs compared to the IRs and NCs.

    There are gaps in the transition from gut follicular or memory B cellsinto plasma cells in INRs.

  • LETTER
    Wenting Ren , Xiaoxiang Zhou , Ziming Jiang , Shiqi Li , Haoxuan Zhang , Jianrong Dai , Yexiong Li , Nan Bi , Yibo Gao , Jie He
    2024, 14(5): e1700. https://doi.org/10.1002/ctm2.1700
  • RESEARCH ARTICLE
    Haiyang Zhou , Yiwen Shen , Guangyong Zheng , Beibei Zhang , Anqi Wang , Jing Zhang , Hao Hu , Jiayi Lin , Sanhong Liu , Xin Luan , Weidong Zhang
    2024, 14(5): e1701. https://doi.org/10.1002/ctm2.1701

    Tumour microenvironment profiling of MCA is developed

    MUC1+ tumour cells interplay with FGF7+/THBS1+ myofibroblasts to promote MCA development.

    MS4A4A+ macrophages exhibit M2 phenotype in MCA.

    ZEB1+ endotheliocytes engage in EndMT process in MCA.

  • RESEARCH ARTICLE
    Qin Tang , Guanghui Hu , Ye Sang , Yulu Chen , Guangyan Wei , Meiyan Zhu , Mengke Chen , Shiyong Li , Rengyun Liu , Zhenwei Peng
    2024, 14(5): e1703. https://doi.org/10.1002/ctm2.1703

    TERT promoter mutation confers sensitivity to PLK1 inhibitors in HCC.

    • The selective growth inhibition of TERT mutant HCC cells induced by PLK1 inhibitor was mediated by Smad3.

    • Combined inhibition of PLK1 and Smad3 showed a cooperative anti-tumor effect in TERT mutant HCC cells.

  • EDITORIAL
    Dingjiacheng Jia , Liangjing Wang
    2024, 14(5): e1704. https://doi.org/10.1002/ctm2.1704
  • REVIEW
    Li Cui , Jiarong Zheng , Yunfan Lin , Pei Lin , Ye Lu , Yucheng Zheng , Bing Guo , Xinyuan Zhao
    2024, 14(5): e1705. https://doi.org/10.1002/ctm2.1705

    Ribosomal RNA (rRNA) modifications, essential components of ribosome structure and function, significantly impact cellular proteomics and cancer biology. These chemical modifications transcend structural roles, critically shaping ribosome functionality and influencing cellular protein profiles. In this review, the mechanisms by which rRNA modifications regulate both rRNA functions and broader cellular physiological processes are critically discussed. Importantly, by altering the translational output, rRNA modifications can shift the cellular equilibrium towards oncogenesis, thus playing a key role in cancer development and progression. Moreover, a special focus is placed on the functions of mitochondrial rRNA modifications and their aberrant expression in cancer, an area with profound implications yet largely uncharted. Dysregulation in these modifications can lead to metabolic dysfunction and apoptosis resistance, hallmark traits of cancer cells. Furthermore, the current challenges and future perspectives in targeting rRNA modifications are highlighted as a therapeutic approach for cancer treatment. In conclusion, rRNA modifications represent a frontier in cancer research, offering novel insights and therapeutic possibilities. Understanding and harnessing these modifications can pave the way for breakthroughs in cancer treatment, potentially transforming the approach to combating this complex disease.

  • LETTER TO THE JOURNAL
    Yan Wang , Yan Sun , Lulu Meng , Quanze He , Jingyu Zhao , Ran Zhou , Zhonghua Wang , Jianxin Tan , Dingyuan Ma , Linlin Fan , Yunmei Chen , Yuguo Wang , Zhu Jiang , Zhihong Qiao , Xiaojuan Wu , Binbin Shao , Ying Xue , Lijie Song , Ting Wang , Ping Hu , Zhengfeng Xu
    2024, 14(5): e1706. https://doi.org/10.1002/ctm2.1706
  • REVIEW
    Jingyong Huang , Zhenhu Zhu , Dirk Schlüter , Kate Lykke Lambertsen , Weihong Song , Xu Wang
    2024, 14(5): e1719. https://doi.org/10.1002/ctm2.1719

    Cerebrovascular diseases (CVDs) are a major threat to global health. Elucidation of the molecular mechanisms underlying the pathology of CVDs is critical for the development of efficacious preventative and therapeutic approaches. Accumulating studies have highlighted the significance of ubiquitin-modifying enzymes (UMEs) in the regulation of CVDs. UMEs are a group of enzymes that orchestrate ubiquitination, a post-translational modification tightly involved in CVDs. Functionally, UMEs regulate multiple pathological processes in ischemic and hemorrhagic stroke, moyamoya disease, and atherosclerosis. Considering the important roles of UMEs in CVDs, they may become novel druggable targets for these diseases. Besides, techniques applying UMEs, such as proteolysis-targeting chimera and deubiquitinase-targeting chimera, may also revolutionize the therapy of CVDs in the future.

  • REVIEW
    Luling Huang , Yuzhi Zuo , Shuli Li , Chunying Li
    2024, 14(5): e1720. https://doi.org/10.1002/ctm2.1720

    This review provides a concise summary of the origin, biological characteristics, homeostatic maintenance and therapeutic potential of cutaneous MSCs.

    The role and potential application value of MSCs in skin pigmentation disorders are discussed.

    The significance of single-cell RNA sequencing, CRISPR-Cas9 technology and practical models in MSCs research is highlighted.