
Functional characterization of caffeic acid O-methyltransferase in internode lignification of switchgrass (Panicum virgatum)
Fengyan WU, Zhenying WU, Aiguo YANG, Shanshan JIANG, Zeng-Yu WANG, Chunxiang FU
Front. Agr. Sci. Eng. ›› 2018, Vol. 5 ›› Issue (1) : 98-107.
Functional characterization of caffeic acid O-methyltransferase in internode lignification of switchgrass (Panicum virgatum)
Caffeic acid O-methyltransferase (COMT) is a crucial enzyme that mainly methylates phenylpropanoid meta-hydroxyl of C5 in the biosynthesis of syringyl lignin in angiosperms. A putative COMT, named as PvCOMT1, was isolated from switchgrass (Panicum virgatum), a C4 warm-season dual-purpose forage and bioenergy crop. Our results showed that recombinant PvCOMT1 enzyme protein catalyzed the methylation of 5-OH coniferyl alcohol, 5-OH coniferaldehyde (CAld5H) and 5-OH ferulic acid. Further in vitro studies indicate that CAld5H can dominate COMT-mediated reactions by inhibiting the methylation of the other substrates. Transgenic switchgrass plants generated by an RNAi approach were further employed to study the function of COMT in internode lignification. A dramatic decrease in syringyl lignin units coupled with an obvious incorporation in 5-OH guaiacyl lignin units were observed in the COMT-RNAi transgenic plants. However, the constitutive suppression of COMT in switchgrass plants altered neither the pattern of lignin deposition along the stem nor the anatomical structure of internodes. Consistent with the biochemical characterization of PvCOMT1, a significant decrease in sinapaldehyde was found in the COMT-RNAi transgenic switchgrass plants, suggesting that CAld5H could be the optimal intermediate in the biosynthesis syringyl lignin.
biofuel crop / caffeic acid O-methyltransferase / forage / lignin / Panicum virgatum / switchgrass / transgenic plant
Tab.1 Summary of oral phase conditions used for static in vitro studies |
Food | Particle size reduction | Composition of simulated salivary fluid | Means of enzyme impregnation | Duration in oral phase | Reference |
---|---|---|---|---|---|
White bread, whole wheat grains, pasta, chick peas and potato | Chewing and manual chopping | Human saliva, phosphate buffer, pH 6.8 | Mastication, mixing | 2–30 min | [34] |
Cooked rice grain | Homogenization by homogenizer | 5 mg a-amylase, calcium chlorite, pH 6.5 | Stirring with magnetic stirrer | 15 min | [35] |
Bread | Cutting and grinding with knife meat grinder | Mucin a-amylase, NaCl, KCl, NaHCO3, pH 6.8 | Pounding with pestle and mortar | 30 s | [36] |
Starch based filled hydrogels | Cutting and grinding with pestle and mortar | NaCl, NH4NO3 KH2PO4, KCl, K5C3H5O7·H2O, H2NCONH2, C5H3N4O3Na2, mucin, pH 6.5 | Stirring | 10 min | [37] |
Emulsion stabilized with dietary fiber | Homogenization | NaCl, NH4NO3, KH2PO4, KCl, K5C3H5O7·H2O, H2NCONH2, C5H3N4O3Na2, mucin, pH 7.0 | Magnetic stirring | 10 min | [38,39] |
Emulsion | Homogenization | 1g a-amylase, urea, uric acid, mucin, KCl, KSCN, NaH2PO4, NA2SO4, NaCl, NaHCO3, pH 8.0 | Magnetic stirring | 5 min | [40] |
Concentrated methylcellulose oil/water emulsion | Stirring | Phosphate buffer, mucin, pH 6.5 | Magnetic stirring | 5 s | [33] |
Deoil cumin dietary fiber mixed with potato starch | Phosphate buffer, pH 6.5 | Shaking by orbital shaker | 60 min | [41] | |
Cooked potato | Mixing using glass spatula | Fresh human saliva | Shaking | 5 s | [19,42] |
Tab.2 Summary of simulated gastric conditions used for static in vitro studies |
Food | Composition of simulated gastric fluid (SGF) | Container and stirring speed | pH and SGF volume | Duration of transit time/incubation time | Reference |
---|---|---|---|---|---|
Modified and native wheat starch | Pepsin, US pharmacopeia SGF | 50 mL beaker, 60 r·min-1 | pH 1.2, 20 mL | 40 min | [19] |
Bran protein and dietary fiber complex with starch | Na2PO4 buffer, NaCl, pepsin | 100 mL beaker, 250 r·min-1 | pH>2.5, 52 mL | 120 min | [17] |
Dietary fiber rich pasta | Distil H2O, pepsin | 60 mL plastic biopsy pot, 130 r·min-1 | pH 2, 31 mL | 30 min | [18] |
Guar gum mixed with starch | Pepsin, US pharmacopeia SGF | 1 L jacketed glass reactor, 650 r·min-1 | pH 1.2, 30 mL | 30 min | [43] |
Starch hydrogel corn starch | NaCl, pepsin, distilled H2O | 50 mL beaker, 100 r·min-1 | pH 2.5, 25 mL | 120 min | [39] |
Cooked rice starch | Pepsin, US pharmacopeia SGF | 500 mL, jacketed reactor, 350 r·min-1 | pH 1.2, 200 mL | 30 min | [35] |
Rice starch with guar gum | Distil H2O, pepsin | 50 mL tubes | pH 2, 25 mL | 30 min | [44] |
Modified wheat starch gels | Pepsin, US pharmacopeia SGF | 50 mL beaker, 60 r·min-1 | pH 1.2, 20 mL | 40 min | [45] |
Cooked potato starch | Pepsin, US pharmacopeia SGF | 500 mL vessel, 350 r·min-1 | pH 1.2, 150 mL | 30 min | [46] |
Tab.3 Summary of static in vitro digestion models used to study the intestinal digestion of starch in the presence of dietary fibers |
Food | Composition of simulated intestinal fluid (SIF) | pH and stirring speed | Parameters investigated | Digestion duration | Nutritional significance | Reference |
---|---|---|---|---|---|---|
Rice grain cooked starch | Pancreatin, invertase, amyloglucosidase sodium acetate buffer | pH 6.8, 350 r·min-1 | Effects of a- amylase and oral digestion on glucose release. Effect of grain type and particle size glucose hydrolysis | 270 min | Provide understanding of the influence of chewing and particles on glucose release rate. This could allow manipulation of the starchy food to change the digestion rate. To quickly screen the digestibility of different grains in order to make appropriate nutritional recommendations | [35] |
Fiber rich pasta | Pancreatin, amyloglucosidase Sodium maleate buffer | pH 7.0, 130 r·min-1 | Fiber influence on starch digestion. Synergistic influence of difference fibers on starch digestions | 120 min | For quickly screen functional dietary fibers for nutritional purposes. To provide knowledge on how to mix fibers for good nutrition outcomes | [18] |
Tapioca starch mixed with different dietary fibers | NaCl, CaCl2 pancreatin | pH 6.5, rheometer shear rate 60/s | Influence of viscosity on digestion rate. Modification influence on digestibility. Physicochemical properties of dietary fibers. Dietary fiber influence on starch digestibility | 180 min | For the modification of high glucose yielding food to minimize digestion rate. To quickly screen newly formulated functional foods for nutritional purposes. Provide information for nutritional claims. Understand the mechanisms and nutritional role of fibers in the digestion processes | [26,43] |
Starch mixed with different concentrations of different fibers | Sodium acetate buffer, pancreatin, amyloglucosidase | pH 6.0, 750 r·min-1 | Influence of fiber concentrations on starch digestibility. Effect of dietary fiber source on digestibility of starch. Influence of starch on digestion in the presence of dietary fiber | 240 min | Provide information to estimate the right amount of dietary fiber for nutritional benefit. To quickly screen functional dietary fiber for nutritional counseling. To identify sources of dietary fiber with nutritional benefits | [8,47] |
Starch hydrogel | Bile extract, calcium chloride, phosphate buffer, pancreatin | pH 7.0, 100 r·min-1 | Influence of starch on lipid digestion | 120 min | Emulsification of fat for functional food products. For the development of controlled release of bioactive oil, such as PUFA | [39] |
Modified wheat starch | Pancreatin invertase amyloglucosidase | pH 6.8, 60 r·min-1 | Influence of starch modification on glucose release rate. Rheological properties on digestion rate | 120 min | Modification of starch to slow down digestibility and glucose release for functional foods. To quickly screen newly developed modified high starch foods | [19] |
Fiber rich cake, wheat gel with apple fibers | Pancreatin, amyloglucosidase, bile, sodium phosphate buffer | pH 6.5 | Identification of cake quality based on glycaemic response. Influence of fiber on nutritional quality of cake. Effect of fiber in cake on glucose release rate | 120 min | To quickly screen newly developed product for nutritional functions. Control of glucose release and absorption. Improvement of GIT physiology and health. Predictive glycaemic index values for nutritional counseling | [15,48,49] |
Fiber rich Biscuit | Sodium acetate buffer, amyloglucosidase, pancreatic amylase | pH 5.2 | Influence of fiber on biscuit digestion. Determination of predictive glycaemic response | 180 min | Production of nutritional products with low glycaemic index. Control of blood glucose through slow release of glucose for starch. Improvement of gastric motility. Improve postprandial glycaemic response | [50] |
Durum wheat with Starch | Lecithin, cholesterol, sodiumtaurochlate, sodium glycodeoxycholate, sodium chloride, calcium chloride, potassium chloride, trypsin, pancreatic amylase, colipase, pancreatic lipase, chymotrypsin | pH 7.0, 170 r·min-1 | Effect on starch digestibility. Effect of fiber particle size on starch digestion. Influence on bioavailability of glucose in the presence of durum wheat fiber | For development of functional products for blood glucose control. To provide bioactivity in the body. Control of glucose release and absorption | [10] |
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Supplementary files
FASE-23520-OF-LXF_suppl_1 (220 KB)
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