A review on microbial aerosols in livestock and poultry environments: pollution characteristics, damage mechanisms, and mitigation measures

Guanliu Yu, Xilong Wang, Zhicheng Song, Yumei Cai

Front. Environ. Sci. Eng. ›› 2024, Vol. 18 ›› Issue (12) : 150.

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Front. Environ. Sci. Eng. ›› 2024, Vol. 18 ›› Issue (12) : 150. DOI: 10.1007/s11783-024-1910-6
REVIEW ARTICLE

A review on microbial aerosols in livestock and poultry environments: pollution characteristics, damage mechanisms, and mitigation measures

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Highlights

● Animal breeding facilities suffer from significant microbial aerosol contamination.

● Aerosol concentrations are higher in poultry houses than in other animal housing.

● The dominant bacterial and fungal species varied among different animal houses.

● ARGs pose a major challenge to disease prevention efforts in animal settings.

● Microbial aerosols mainly cause damage through cytokine storms and oxidative stress.

Abstract

Livestock and poultry breeding environments suffer from serious microbial aerosol pollution, posing a significant challenge to maintaining healthy animal rearing. This study reviewed the sources, pollution status, hazards, pathogenic mechanisms, and mitigation measures of microbial aerosols in livestock and poultry breeding settings, based on research conducted over the past two decades. Notably, the study analyzed the distribution characteristics of aerosol components in various animal houses, with a focus on identifying the main factors affecting these characteristics and the molecular mechanisms by which they damage the animal immune system. Quantitative analysis revealed varying concentrations of bacterial and fungal aerosols in different animal houses, with poultry houses often exhibiting higher concentrations. The dominant bacterial and fungal species varied across different animal houses, emphasizing the complex composition of microbial aerosols. Furthermore, antibiotic-resistant bacteria and genes, particularly those resistant to tetracycline, are prevalent in these environments, challenging disease prevention and control efforts. Thus, the infection source must be controlled through isolation measures and proper waste management. Proper disinfectant use, responsible antibiotic stewardship, biosecurity measures, and alternative disease prevention strategies should be implemented. Future research should focus on developing monitoring technologies for pathogenic microorganisms, implementing purification technologies, and investigating the immune-damaging mechanisms of microbial aerosols. By addressing these areas, we can further understand microbial aerosols in livestock and poultry environments and develop effective strategies to mitigate their harmful effects. This review contributes to the sustainable development of animal farming to ensure the health and welfare of animals.

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Keywords

Microbial aerosols / Animal breeding environments / Immune damage / PM2.5 / ARGs

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Guanliu Yu, Xilong Wang, Zhicheng Song, Yumei Cai. A review on microbial aerosols in livestock and poultry environments: pollution characteristics, damage mechanisms, and mitigation measures. Front. Environ. Sci. Eng., 2024, 18(12): 150 https://doi.org/10.1007/s11783-024-1910-6

1 Introduction

Wastewater treatment plants (WWTPs) are essential components of sustainable and effective waste management schemes and play a crucial role in water environmental protection (Geerdink et al., 2017). The treatment of wastewater not only prevents the release of harmful pollutants into natural water bodies but also mitigates the risks to public health and aquatic ecosystems. Stable and high-quality effluent is indispensable for the effective operation of WWTPs. In determining the effluent quality, ammonia nitrogen (NH3) and chemical oxygen demand (COD) are essential. As key control parameters in WWTPs, NH3, and COD represent the level of nitrogenous waste and organic pollutants in the effluent, respectively, that affect WWTP performance and compliance with regulatory standards (Wu et al., 2019). Therefore, the accurate prediction of NH3 and COD effluent concentrations is vital for ensuring water safety, satisfying regulatory standards, and optimizing the management of WWTPs.
Data-driven methods for predicting effluent water quality have become increasingly popular due to the increasing volume of available data produced by WWTP operations. Several models have been developed to establish connections between available water quality data and effluent quality. Among these, time series analysis using linear and nonlinear approaches has emerged as a widely accepted method (Tealab, 2018). Early research primarily utilized linear techniques such as multiple linear regression (Poutiainen et al., 2010; Zare Abyaneh, 2014) and the autoregressive integrated moving average model (Al-Asheh et al., 2007). These models assume linear relationships among the water quality parameters and provide low computational costs and easily interpretable results. In comparison, nonlinear techniques are effective at enhancing prediction accuracy because of their ability to simulate brain-like computations, making them particularly successful at predicting intricate systems (Mehonic and Kenyon, 2022). Thus, brain-inspired models, such as artificial neural networks (Lee et al., 2011; Nasr et al., 2012; Bekkari and Zeddouri, 2019), support vector machines (Guo et al., 2015; Granata et al., 2017; Wang et al., 2018; Fu et al., 2023), and kernel function-based optimization methods (Bagheri et al., 2015; Fernandez de Canete et al., 2016; Zhu et al., 2017; Liu et al., 2019), have been increasingly employed and are preferred when managing the complex and nonlinear behaviors of wastewater treatment systems, especially when considering the high interdependence among the parameters involved (Zodrow et al., 2017). These models adopt a broader set of characteristics such as the ability of the brain to process large amounts of information, to improve their prediction accuracy. In recent years, deep learning methods such as Long Short-Term Memory networks (LSTM) and convolutional neural networks (CNN), have emerged as powerful tools for time-series analysis in water quality prediction (Wang et al., 2023; Zhang and Li, 2023). These methods differ significantly from traditional linear and nonlinear models because they can handle more extensive and complex data sets, leading to improved prediction accuracy. For example, the LSTM model, which is inspired by the temporal dependency of human memory, excels at processing sequential data. Meanwhile, a CNN emulating the hierarchical structure of the human visual system allows effective feature extraction from images. For instance, Wang et al. (2017) demonstrated that LSTM models are more reliable than back-propagation neural networks and extreme learning machine models in predicting dissolved oxygen (DO) and total phosphorus (TP) in water. Similarly, Ta and Wei (2018) presented a CNN model for predicting DO concentration, which provided better feature extraction results and improved accuracy compared with other models. Despite significant advancements in data-driven methods, remaining challenges must be addressed to fully harness their potential for effluent water quality prediction. First, the availability of high-quality data are crucial for the success of these methods; however, obtaining such data are often limited and costly. Second, these methods require further optimization and improvement to enhance their performance, particularly regarding prediction accuracy and computational efficiency.
To achieve enhanced effluent quality prediction, researchers have explored brain-inspired techniques, particularly hybrid models that combine CNN and LSTM (Barzegar et al., 2020). Hybrid approaches leverage the efficient feature extraction capabilities of CNN and the time correlation capture ability of LSTM, resulting in a more dependable water quality prediction performance than single models. Additionally, image recognition technology offers a promising avenue for water quality prediction and serves as a potential integration method for diverse models. By analyzing images of wastewater or sludge samples, researchers can extract valuable information related to water quality parameters, making relatively high-accuracy prediction possible (Litjens et al., 2017; Rawat and Wang, 2017). Studies analyzing wastewater surface images aim to capture the relationships between the visual characteristics that are perceivable by the human eye and the target water quality parameters. This method offers benefits for real-time prediction as it capitalizes on readily available visual characteristics that are closely linked to effluent quality (Liu et al., 2014; Mullins et al., 2018; Li et al., 2022b). Data-driven models offer advantages in terms of capturing temporal correlations, whereas image recognition technology provides valuable information related to water quality parameters. Recently, multimodal data fusion has emerged as a focal point of research, yielding significant advancements across various domains (Li et al., 2022a). This approach, which is reminiscent of the ability of the human brain to process diverse data types concurrently, has demonstrated multiple advantages in terms of efficient and accurate practical applications (Lahat et al., 2015). For instance, its implementation in the financial and medical sectors has significantly enhanced the precision of stock market analysis and disease diagnostics, respectively (Lee and Yoo, 2020; Muhammad et al., 2021). We hypothesize that a brain-inspired multimodal approach mirroring the human brain’s proficiency in processing diverse data would offer a more comprehensive representation of complex water quality patterns. This method not only aims to achieve enhanced prediction accuracy but also strives to reduce the dependency of traditional methods on expensive sensors, subsequently lowering costs. Although recent algorithms and computational resource advancements have bolstered the brain-inspired multimodal strategy, consequential challenges remain. These encompass the limited availability of multimodal data in the wastewater sector, the uncharted territories of data fusion, model robustness, and data preprocessing and compatibility problems. Practical experiments with real-world data are paramount to validate the efficacy of the approach. Despite these challenges, the proposed brain-inspired multimodal method enhances traditional monitoring techniques, offering a more encompassing view of wastewater dynamics.
This study aims to enhance water quality prediction using a brain-inspired approach, integrating wastewater surface image features with time series data, and imitating how the human brain processes complex multimodal information. We propose a novel brain-inspired image and temporal fusion (BITF) with a CNN-LSTM network (CL) model for effective prediction which includes 1) an image feature extraction module that captures high-dimensional visual information from wastewater surface images; 2) an adaptive feature fusion method that assigns different weights to image and time series data; and 3) a CNN-LSTM architecture that effectively leverages both short and long-term data for accurate predictions. To evaluate the performance of the BITF-CL model, we compared it with other widely used models using real-world data sets and appropriate evaluation metrics to demonstrate the effectiveness and advantages of our proposed approach.

2 Experimental platform and data collection

2.1 Experimental platform

To investigate the dynamics of essential parameters in sewage treatment processes, we developed an experimental platform utilizing a 200 L sequencing batch reactor (SBR) made of acrylic, as depicted in Fig.1(a). The influent of the reactor was collected from an actual urban sewage treatment plant to ensure accurate and reliable data for developing the water quality prediction model. The reactor operates in a 180-min cycle, with phases of synchronous filling and discharging (20 min), anaerobic treatment (25 min), aeration (120 min), and settling (15 min). During the aeration phase, the air pump typically provides an aeration velocity of 15 L/min under regular operation. This rate is adjustable and is continuously monitored using a flow gauge. An inlet tank was used to temporarily store the influent wastewater before it was fed into the SBR during the filling phase, while an outlet tank temporarily stored the treated water before being discharged. The adaptable design of the SBR allows adjustments to operational parameters as needed, thereby enhancing efficiency and control and facilitating the optimization of sewage treatment.
Fig.1 Schematic of the (a) experimental platform and (b) platform structure.

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2.2 Image and sensor data collection

To acquire multimodal wastewater data, a high-resolution overhead camera (WSD-2133-V01, Weishida, China) with a resolution of 1920 × 1080 was used to capture images of the sewage surface every minute. These images provided insights into the physical and chemical changes at the liquid surface during treatment. As shown in Fig.1(b), water quality sensor arrays (LH-G8820, Lohand, China) were strategically placed. Influent water quality sensors were placed in the inlet tank, while those for effluent readings were positioned near the outlet of the SBR. These sensors continuously monitored essential indicators such as COD, DO, pH, NH3, electrical conductivity (EC), oxidation-reduction potential (ORP), suspended solids (SS), and temperature at consistent 1-min intervals. The study monitored 16 indicators using 8 sensors in influent and effluent streams. However, when predicting specific effluent parameters, such as NH3 and COD, we excluded their effluent values from the input features to prevent data leakage and ensure robust model training. As a result, the maximum number of parameters used in the predictions is 15.
All the monitored indicators were chosen based on their known impact on microbial activity and the overall effectiveness of wastewater biological treatments (Mulkerrins et al., 2004; Guštin and Marinšek-Logar, 2011). Furthermore, they are essential tools for effectively monitoring the treatment process (Yu et al., 2013; Alattabi et al., 2017). We used a registration script to synchronize image capture timestamps and sensor readings to ensure consistent data collection. This precise alignment was essential, especially considering the 1-min data collection intervals. Maintaining data quality was of identical importance. The Outliers were removed, and data normalization was performed to ensure consistent scaling of all water quality metrics, preventing any excessive impact on the model.

2.3 Experiment settings

To rigorously evaluate the efficiency of the BITF-CL model in predicting effluent COD and NH3 concentrations, we collected 40 d of multimodal data consisting of 40246 data points, each including corresponding water quality and image data. The data set was divided into 36 d under normal conditions and 4 d under anomalous conditions. These anomalous conditions were created by manually modifying the aeration velocity. Further information about these operational shifts will be provided in later sections.
For model assessment, we adopted two distinct partitioning methodologies. In the regular conditions, data was split in a 6:3:1 ratio for training, validation, and testing. Results from this test set formed our primary evaluation metrics, revealing model performance in typical scenarios. Conversely, regular conditions data was used for training and validation under anomalous conditions, while anomalous data was reserved for testing, allowing us to evaluate the model’s adaptability to operational changes. The previous 150 data points were employed for each prediction since this period covers necessary processing steps throughout the entire 180-min SBR cycle. This approach ensures accurate short- and long-term forecasts, and we based our predictions on historical data at 1-min and 1-h intervals.
We contrasted the model against LSTM and CNN-LSTM in performance benchmarks to highlight its specific advantage in multimodal prediction accuracy. The development of these models was facilitated using Pytorch 1.8.0 and TensorFlow 2.2.0 (Paszke et al., 2019; Pang et al., 2020) frameworks. Our experimental environment featured an Intel Xeon E5-2679 v4 CPU and an RTX 2080Ti GPU. We used Ubuntu 18.04 as the operating system and Python 3.6 as the development language.

3 Model establishment and evaluation

3.1 Development of the BITF module

Inspired by the brain’s ability to integrate multimodal information, we developed a BITF module. This module aims to combine sewage surface images and water quality parameters, offering valuable insights for wastewater treatment. These images, rich in visual indicators, reveal the physicochemical of sewage attributes through variations in texture and color. For instance, color variations can reflect changes in chemical concentrations, while changes in texture can indicate differences in sediment granularity or distribution. To accurately interpret these visual cues and to further the utility of the BITF module, a robust image feature extraction method was necessary. We incorporated the VGG11 network into the BITF due to its proven efficiency in extracting intricate image features with a relatively simpler architecture than deeper networks, ensuring accuracy and computational efficiency. As illustrated in Fig.2, VGG11 comprises stacked convolutional (conv), max-pooling (pooling), and fully connected (fc) layers. These layers transform simple textures into more complex visual concepts (Sengupta et al., 2019).
Fig.2 Image feature extraction process.

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The conv layer is pivotal in this transformation process, which allows the network to identify and highlight intricate image patterns by the following equation (Eq. (1)):
Iout=ijIin(i,j)×K(xi,yj).
First, in the conv layer, the x and y denote the coordinates in the output image. Meanwhile, the i and j refer to the positions in the input image multiplied with a specified filter. Iout and Iin are the output and input images, respectively. Lastly, K is the conv kernel or filter that detects specific features. Subsequently, the pooling layer is used to reduce the size of the feature map while preserving essential features (Peng et al., 2019). This methodology enhances computational performance and augments the network’s resilience to overfitting. Finally, after the pooling layer, the extracted features are integrated into feature vectors through stacked fc layers to capture patterns and relationships in the image data for practical analysis and prediction. With this foundational understanding, it is crucial to consider the practical adaptations made for our specific study. We resized the original 1920 × 1080 wastewater images to 224 × 224 to comply with the network input requirements. This allowed us to efficiently extract visual features using the VGG11 architecture tailored to our needs. We modified the last fully connected layer to output a 10-dimensional vision feature vector c instead of the conventional 1000-dimensional feature vector, ensuring a more accurate representation of the visual features inherent to wastewater during treatment.
After image feature extraction, we focused on integrating image and temporal data within the BITF module, utilizing a self-attention mechanism. Inspired by the brain’s capacity to prioritize specific sensory inputs, this mechanism quantifies the significance of diverse elements in the input sequence, and subsequently modulates their impact on the output (Niu et al., 2021). In the fusion process, the 10-dimensional image feature vector c was concatenated with the water quality feature vector s, which has a dimensionality of up to 15, depending on the sensors used. This results in an input feature vector m with a maximum dimensionality of 25. The Fig.3 visualizes this self-attention-based fusion process.
Fig.3 Image and time series feature fusion based on self-attention.

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The input features from m were first transformed into three distinct feature spaces, f(mi), g(mj), and h(mi), by their respective linear transformations Wf, Wg, and Wh. As showcased in Fig.3, the attention weights, denoted as Ai,j, where i and j are indices of the input feature map, were derived using the formula (Eq. (2)):
Ai,j=softmax(f(mi)g(mj)).
The f(mi) and g(mj) are the query and key vectors. After being processed by the softmax function, their dot product yields Ai,j. This weight quantifies the importance of each data input, indicating which features should be emphasized more during the subsequent fusion, whether from imagery or water quality metrics.
By using the attention weights in Eq. (2), the value vector h(mi) informs the weighted sum of features to generate the final multimodal feature vector Oj. This vector reflects the joint expression of sewage image and water quality features, as given by (Eq. (3)):
Oj=i=1NAi,jh(mi).
Significantly, the multimodal feature vector Oj, which assimilates insights from image and water quality data, preserves its dimensionality, matching that of m at 25 dimensions. The distinctiveness lies in its construction: rather than relying on predefined weights, it is molded by the model’s adaptively learned weights. The BITF proficiency in feature extraction and fusion exemplifies a brain-inspired design that emulates the ability of the human brain to synthesize sensory inputs into a coherent interpretation. The multimodal feature vector is critical for achieving accurate water quality predictions because of its encompassing nature.

3.2 Construction of the BITF-CL model

Expanding on the BITF module introduced in Section 3.1, we further integrated it with the CNN-LSTM network to formulate the comprehensive BITF-CL model. As depicted in Fig.4, the multimodal feature vectors Oj, generated by processing sewage images and water quality data through the BITF module, serve as a vital input to the subsequent CNN-LSTM network. This approach leverages the advantages of multimodal data, enhancing prediction accuracy and robustness. The CNN-LSTM architecture, consisting of an initial CNN layer followed by two LSTM layers, is designed for intricate temporal pattern extraction. It excels in extracting both local temporal patterns and long-range dependencies from Oj, achieving superior water quality forecasting compared to traditional LSTM networks (Yang et al., 2021).
Fig.4 Model architecture of BITF-CL.

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The initial CNN layer, equipped with 128 filters of 3 × 3 kernel size, refined the Oj vectors, producing feature maps represented as Ot for each time instance t. Following this, the feature map Ot is relayed to the two LSTM layers, each containing 64 units and incorporating a 0.2 dropout rate to mitigate overfitting. These LSTM layers are integral in analyzing time-series data, extracting essential insights for water quality prediction, and utilizing the forget, input, and output gate mechanisms, further illustrated by the subsequent equations (Eqs. (4)–(6)):
Ft=σ(Wf[ht1,Ot]+bf),
It=σ(Wi[ht1,Ot]+bi),
Ct=tanh(Wc[ht1,Ot]+bc),
where Ft represents the forget gate, which determines the information to be discarded from the previous cell state, improving the model’s ability to focus on relevant data. It is the input gate, which controls the degree to which new information contributes to the updated cell state. Ct is a candidate value that helps incorporate new information into the cell state. The weight matrices of the corresponding gates are denoted by W*, and the biases are represented by b*. Here, * acts as a wildcard. The σ in equations is the sigmoid activation function, which helps control the flow of information through the gates. The tanh is the hyperbolic tangent function aiding in regulating the cell state.
The two LSTM layers work in tandem to capture short- and long-term correlations in the time-series data, which are essential for extracting crucial information for water quality prediction. By integrating these modules, the BITF-CL model can analyze multimodal features, providing a more comprehensive understanding of water quality dynamics. This ability can potentially enhance the predictive performance of the model in water quality prediction tasks.

3.3 Effluent quality prediction evaluation

In this study, we evaluate the effectiveness of the model using three evaluation indexes: root mean square error (RMSE), coefficient of determination (R2), and mean absolute percentage error (MAPE) (Chicco et al., 2021). These indexes help measure the difference between predicted and observed values.
The RMSE calculates the square root of the mean square deviation between the predicted values and the target observation values to evaluate the model. The calculation formula is as follows (Eq. (7)):
RMSE=1ni=1n(y^iyi)2,
where yi is the actual value of the ith target, y^i is the model’s predicted value for the ith point, and n is the total number of data points. A lower RMSE value indicates a minor difference between the predicted and actual values, meaning that the model has a higher prediction accuracy.
The R2 is a measure of the proportion of the variance in the target variable that is predictable from the independent variables. It provides an indication of how well the model’s predictions fit the actual values. The calculation formula is as follows (Eq. (8)):
R2=1i=1n(y^iyi)2i=1nyiyi2,
where yi is the actual value of the ith target, y^i is the model’s predicted value for the ith point, yi is the mean of the target values, and n is the total number of data points. The R2 value ranges from 0 to 1, with higher values indicating better model performance.
The MAPE is used to evaluate the mean absolute percentage deviation between the predicted values and the target values. The calculation formula is as follows (Eq.(9)):
MAPE=1ni=1n|y^iyiyi|,
where yi is the actual value of the ith target, y^i is the model’s predicted value for the ith point, and n is the total number of data points. The smaller MAPE is, the smaller the average percentage difference between the predicted and actual values, which means that the model’s prediction accuracy is higher.

4 Results and discussion

4.1 BITF-CL and other unimodal models

In this study, we developed the BITF-CL model for predicting COD and NH3 levels. Parallel to our brains processing multi-sensory information, our model integrated the sewage surface image features with water quality data. To evaluate the performance of the BITF-CL model, we employed data collected under regular conditions detailed in Section 2.3 to establish a standard benchmark. We evaluated the model’s capability at 1-min and 1-h intervals, comparing it with conventional unimodal methods, specifically LSTM and CNN-LSTM, which rely solely on water quality data.
Tab.1 and Tab.2 compare the prediction performance of different models for COD and NH3 levels at 1-min and 1-h intervals, respectively. The BITF-CL model consistently outperformed the other models, with an R2 improvement of 4.40% over CNN-LSTM and 9.20% over LSTM for COD at 1-min, and a gain of 5.43% over CNN-LSTM and 8.99% over LSTM for NH3 at the same interval. Similar improvements were observed for predictions at the 1-h intervals. This improved performance can be attributed to the unique image feature extraction and fusion mechanism inspired by the brain processing visual information, as employed by the BITF-CL model. The mechanism effectively includes other visual features into the unimodal time series, enhancing the performance of model when handling multimodal data input.
Tab.1 Performance comparison among different models (1-min)
IndexModelCODNH3
RMSEMAPER2RMSEMAPER2
Model 1BITF-CL20.750.180.950.300.040.97
Model 2CNN-LSTM26.940.210.910.520.050.92
Model 3LSTM29.690.250.870.560.060.89
Tab.2 Performance comparison among different models (1-h)
IndexModelCODNH3
RMSEMAPER2RMSEMAPER2
Model 1BITF-CL24.400.210.910.350.050.93
Model 2CNN-LSTM32.120.230.860.610.070.89
Model 3LSTM35.410.270.810.670.100.86
Fig.5 compares the predicted NH3 and COD values for BITF-CL, LSTM, and CNN-LSTM against the actual measurements at 1-min and 1-h intervals, which witness sudden COD value fluctuations ranging from 40 mg/L to 200 mg/L. These fluctuations mainly owe to the SBR process entering the aeration stage, where the sludge-water mixture disrupts the fluorescence-based COD sensor. Such interference does not compromise the predictive capacity of our model. Focusing on the 1-min interval (Fig.5(a) and Fig.5(b)), the BITF-CL model impressively captures the actual values, recording an RMSE of 20.75 for COD prediction and 0.30 for NH3, demonstrating its precision. For MAPE, it exhibits superiority with the lowest recorded values of 0.18 and 0.04 for COD and NH3, respectively. In contrast, the unimodal models tended to overestimate NH3 levels, particularly during the 100–300 and 800–900 min, as suggested by their higher RMSE and MAPE values.
Fig.5 Comparison of NH3 and COD predictions and actual values for 1-min and 1-h intervals. (a) NH3 and (b) COD prediction for 1-min; (c) NH3 and (d) COD prediction for 1-h.

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For the 1-h interval predictions (Fig.5(c) and Fig.5(d)), the BITF-CL model continues to demonstrate its exceptional performance. Despite the rise in RMSE by 17.59% and 16.67% for COD and NH3, the BITF-CL model remains robust. The R2 declined modestly by 4.21% and 4.12%, while the MAPE exhibited minor increases of 16.67% and 25.00%, underscoring the model’s capability in longer-period prediction. In contrast, LSTM and CNN-LSTM models struggle with abrupt changes in actual COD values, reflected by their heightened RMSE and MAPE values. Significantly, the BITF-CL model uses multimodal inputs, which combine different data types such as images and time series data. This feature contributes to its consistently superior prediction performance across 1-min and 1-h intervals. Although 1-h predictions were slightly less precise than 1-min predictions, the model still produced results within an acceptable range. The lessened precision over the 1-h is attributed to the increased variability inherent to longer-duration wastewater quality data. Despite intrinsic challenges, the BITF-CL model provides accurate predictions, further validating our method’s potential. Future analyses and experiments continue to use the 1-min predictions as the foundation, given their higher precision and lesser variability. This decision is driven by the increased accuracy of shorter-duration predictions, which offer a more reliable basis for further research.
The experimental results underscore the importance of the image feature extraction and fusion module in the BITF-CL model, which enhances unimodal time series data by incorporating visual elements from images, such as texture patterns, color shifts, and contour differences. These visual components represent physical attributes and chemical reactions pertinent to water quality parameters (Boztoprak et al., 2016; Tomperi et al., 2017). Previous studies have confirmed the correlation between the image particle size, shape, sludge distribution, and target water quality parameters (Khan et al., 2018; Costa et al., 2022). Conventional time series data fail to independently capture these properties and reactions. By integrating images and time series data, the BITF-CL model achieved superior COD and NH3 level predictions compared with the LSTM and CNN-LSTM models. This enhanced performance can be attributed to the comprehensive representation of complex water quality patterns, addressing the limitations of unimodal models that rely on complex feature engineering, numerous water quality sensors, or manual variable selection.

4.2 Camera and sensor combination analysis

This section aims to ascertain the minimal sensor group required for stable prediction. To achieve this, we utilized data collected under regular conditions as outlined in Section 4.1, guaranteeing that the evaluation reflects the model’s performance during the system’s stable operation. This section focuses on model performance and examines the impact of various water-quality sensor and camera combinations. We performed ten replications of the test set to ensure a robust evaluation. Such repeated evaluations help capture the variability and ensure our findings’ reliability based on RMSE, MAPE, and R2 results.
We used eight setups of cameras and water quality sensors: CALL (using Camera, DO, SS, pH, EC, ORP, and temperature sensors), ALL (CALL without camera), CNS (CALL excluding SS sensor), NS (CNS excluding camera), CND (CALL excluding DO sensor), ND (CND without camera), CNDS (CALL without DO and SS sensors), and NDS (CNDS without camera). We use these abbreviations throughout the study to refer to their respective setups.
Fig.6 illustrates the predictive performance of different sensor configurations. The CALL configuration notably outperformed in predicting NH3 and COD levels, evidenced by its average RMSE (mg/L) of 26.4, MAPE of 0.21, and R2 of 0.457 for COD. Meanwhile, the CNS, CND, ALL, and CNDS configurations also exhibited commendable outcomes with RMSE values ranging from 27.2 to 32.5 mg/L, MAPEs between 0.23 and 0.26, and R2 values from 0.930 to 0.943. For NH3, the CALL configuration achieved an average RMSE of 0.41 mg/L, MAPE of 0.07, and R2 of 0.964, capturing 96.4% of the variance. These configurations produced consistent results, characterized by RMSE values between 0.43 and 0.52 mg/L, MAPEs from 0.08 to 0.11, and R2 values from 0.946 to 0.961.
Fig.6 Predictive performance for NH3 and COD levels using different sensor configurations. (a) RMSE, (b) MAPE, and (c) R2 for NH3; (d) RMSE, (e) MAPE, and (f) R2 for COD.

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Moreover, to evaluate the significance of the differences among the configurations, we performed a one-way analysis of variance and Tukey’s Honestly Significant Difference test on the RMSE, MAPE, and R2 values of each configuration. The results are shown in Fig.6, where n.s. indicates no significant difference, * indicates a difference of p < 0.05, and ** represents a more significant difference at p < 0.01. We found that CALL, which included all sensors, performed best in predicting COD and NH3 levels. ALL showed a significant performance decline (p < 0.05), indicating the importance of image data for water quality prediction. Compared with ALL, CNDS lacked SS and DO sensors but achieved similar results after adding image features (p > 0.05). This demonstrates that benefiting from the multimodal feature fusion mechanism of the BITF-CL model, the camera can partially replace SS and DO sensors to achieve accurate sewage quality prediction. The finding is noteworthy because a camera is more cost-effective and easier to maintain than the aforementioned sensors for practical applications.
The NS, ND, and NDS configurations without image data significantly underperformed compared with CALL (p < 0.01). This underperformance suggests that the model can not capture the essential visual characteristics of water quality parameters such as chromaticity, transparency, and bubble shape. Evaluating the performance across setups, CALL exhibited exceptional performance, while CNS and CNDS achieved results comparable to ALL despite having fewer sensors. These results indicate that we can occasionally use fewer sensors without compromising predictive accuracy. Therefore, we focused on three configurations for further study: CALL for its top-tier performance, CNS for its robustness without a sensor, and CNDS for achieving comparable results to ALL with fewer sensors.

4.3 Predictive performance under varying aeration velocity

To further evaluate the robustness of the BITF-CL model under anomalous conditions, as detailed in section 2.3, we focused on three sensor configurations identified in the last section: CALL, CNS, and CNDS. We introduced a real-world disturbance by adjusting the aeration velocity of the SBR from 15 to 5 L/min. Such an intentional modification simulates deviations of crucial control parameters, reflecting common incidents like the block of aeration discs that typically lead to significant decreases in aeration velocity, impacting the effluent quality. Although this modified period persisted for 4 d, our analysis focuses on the most pivotal 1500 min marked by pronounced NH3 and COD fluctuations.
We used this selected data as a test set to evaluate the model’s performance, which was pre-trained under regular conditions. Our goal was to assess its ability to predict and adapt to unfamiliar anomalies accurately. Fig.7 shows a comparison between the values predicted by the model using the three sensor configurations and actual values after a sudden reduction in aeration. Error curves are plotted below the line graphs to intuitively reveal the differences among these configurations. The smaller the area between the error curve and x-axis, the more accurate its prediction.
Fig.7 Comparison of predicted and actual values of NH3 and COD concentration after aeration velocity reduction. Predicted vs actual (a) NH3 and (b) COD values; Error curve for (c) NH3 and (d) COD values.

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After the reduction in aeration velocity, the DO amount decreased in the reactor. This decrease inhibited the activity of nitrifying bacteria and prevented the efficient conversion of NH3 to nitrite and nitrate, leading to a continuous rise in NH3 levels. As demonstrated in Fig.7(a) and 7(c), the CALL configuration outperformed the CNS and CNDS configurations in predicting the NH3 level. However, all three configurations achieved close predictions of the actual values. The error plots reveal that during the initial 800 min, the model underestimated the actual data peak and overestimated valley values. The model underestimated the concentration during the subsequent 800 to 1500 min interval. This problem may be due to the model allocating more weight to track its variation trend, thereby compromising its fitting capability for local parameters. Nevertheless, the maximum error values for all configurations were lower than 1.5 mg/L. Meanwhile, CALL, CNS, and CNDS achieved excellent prediction performance with RMSEs of 0.37, 0.48, and 0.65 mg/L, respectively. These experiments demonstrated that an accurate prediction of NH3 level can be realized using the BITF-CL model with the assistance of image data and fewer water quality sensors.
The predicted and measured results for the COD level after reducing the aeration velocity are shown in Fig.7(b) and Fig.7(d). The actual value had a noise of approximately 200 mg/L owing to sensor interference by the mixed liquid of sludge and water during aeration. The COD measurement returned to normal after aeration was stopped. Reducing the aeration velocity decreased aerobic bacterial activity and organic matter transformation, thereby continuously increasing COD levels in the valley area.
The CALL configuration exhibits the best prediction performance throughout the error curve, with a maximum error of < 6.5 mg/L in the trough section. Compared with CNDS, the CNS configuration had an approximately 43% lower error in the trough section on average. Overall, CALL, CNS, and CNDS exhibited excellent performances in the valley interval of interest, with RMSEs of 25.94, 27.42, and 33.67 mg/L, respectively. However, this model is unsuitable for predicting the step peaks caused by sensor errors.
Fig.8 presents scatter plots for different sensor combinations predicting COD and NH3 levels. The dotted line indicates perfect prediction, where the predicted value is equal to the observed value. The colors indicate the point density and data frequency across various intervals. The results revealed that the CALL, CNS, and CNDS sensor combinations closely followed the actual trends for predicting the concentrations of both pollutants. For NH3 prediction, the respective R2 values were 0.96, 0.94, and 0.91. For COD prediction, the overall fitting accuracy of the three sensor combinations was acceptable, except for a slight underperformance in fitting high abnormal peaks. The R2 values for these combinations were 0.94, 0.91, and 0.90, respectively. Ultimately, while the CALL combination achieved the highest accuracy, the BITF-CL model captured the main characteristics and trends of the COD and NH3 data when employing fewer sensors, such as the CNS and CNDS combinations. By eliminating costly DO and SS sensors, these alternative configurations still delivered comparatively excellent predictive performance at reduced expense.
Fig.8 Scatter plot of predicted and actual values of NH3 and COD concentration. NH3 prediction for (a) CALL, (b) CNS, and (c) CNDS; COD prediction for (d) CALL, (e) CNS, and (f) CNDS.

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4.4 Practical implications

Using the BITF-CL model, we applied a brain-inspired method to jointly analyze wastewater surface images and water quality sensor data, achieving high-precision effluent water quality predictions. When all water quality sensors and image data are accounted for, this model’s predictive capability significantly surpasses traditional unimodal models, especially over forecasting intervals of 1-min and 1-h. Remarkably, even without critical sensors (DO and SS), the model’s performance rivals traditional methods when image information is integrated. This multimodal fusion strategy enhances data dimensionality, ensuring sustained prediction stability even during sensor malfunctions or abnormalities. Economically speaking, the cost of obtaining image data are considerably lower than that of traditional sensors. The BITF-CL model effectively reduces the overall expenditure for WWTP monitoring systems. Additionally, it introduces tangible efficiency improvements for everyday operations. Leveraging non-contact image data as auxiliary prediction variables dramatically streamlines system maintenance and substantially reduces maintenance costs associated with traditional submerged sensors (Storey et al., 2011). This model allows wastewater treatment plants to swiftly adjust treatment processes over 1-min and 1-h forecasting scales, effectively mitigating risks.
Given the advantages outlined, the model adaptively extracts beneficial information from multiple data sources for water quality predictions. This multifaceted fusion strategy presents a novel solution for current wastewater treatment and holds promise for future applications, such as industrial wastewater analysis and lake and river quality forecasting. Of course, there remains room for optimization in the BITF-CL model, particularly in areas like image acquisition, data fusion algorithms, and computational capabilities. Nonetheless, its current iteration has showcased impressive performance and extensive application potential. Considering its cost-effective deployment, it holds immense value for both urban wastewater treatment facilities and decentralized rural wastewater treatment structures.

5 Conclusions

This study aimed to improve the prediction of COD and NH3 levels in wastewater treatment facilities using the BITF-CL model, which mimics human cognitive abilities to integrate multimodal data, including image and time series data. We compared the performance of our proposed model with that of conventional methods, such as LSTM and CNN-LSTM, and explored the potential for reducing the dependency on sensor data using our approach. In summary, the main findings are: 1) The BITF-CL model demonstrated superior prediction accuracy compared with LSTM and CNN-LSTM, effectively incorporating additional visual features into the unimodal time series through its unique image feature extraction and fusion mechanism. 2) This study highlighted the significance of sewage surface image data in improving water quality predictions, emphasizing the potential to reduce monitoring costs and maintenance requirements when specific DO and SS sensors are missing. 3) The BITF-CL model remained stable and accurate even when the aeration speed in the SBR suddenly changed, indicating its potential for practical application in wastewater treatment facility management. Future work should focus on refining the model, exploring more advanced feature extraction and fusion techniques, and evaluating its performance in different scenarios and applications. We aim to enhance the efficiency and cost-effectiveness of monitoring and managing water quality in wastewater treatment facilities and beyond by further optimizing the model and expanding its capabilities.
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References

[1]
AdhikariAClark S (2017). Disinfection of microbial aerosols. In: Hurst C, ed. Modeling the Transmission and Prevention of Infectious Disease. Advances in Environmental Microbiology. Cham: Springer
[2]
AkoijamNJoshi S R (2022). Conservation metagenomics: understanding microbiomes for biodiversity sustenance and conservation. In: Kumar A, Choudhury B, Dayanandan S, Khan M L, eds. Molecular Genetics and Genomics Tools in Biodiversity Conservation. Singapore: Springer
[3]
Bai H, He L Y, Wu D L, Gao F Z, Zhang M, Zou H Y, Yao M S, Ying G G. (2022). Spread of airborne antibiotic resistance from animal farms to the environment: dispersal pattern and exposure risk. Environment International, 158: 106927
CrossRef Google scholar
[4]
Bakutis B, Monstviliene E, Januskeviciene G. (2004). Analyses of airborne contamination with bacteria, endotoxins and dust in livestock barns and poultry houses. Acta Veterinaria Brno, 73(2): 283–289
CrossRef Google scholar
[5]
Balasubramanian R, Nainar P, Rajasekar A. (2012). Airborne bacteria, fungi, and endotoxin levels in residential microenvironments: a case study. Aerobiologia, 28(3): 375–390
CrossRef Google scholar
[6]
Banhazi T M, Seedorf J, Laffrique M, Rutley D L. (2008). Identification of the risk factors for high airborne particle concentrations in broiler buildings using statistical modelling. Biosystems Engineering, 101(1): 100–110
CrossRef Google scholar
[7]
Bartlett K H, Kennedy S M, Brauer M, van Netten C, Dill B. (2004). Evaluation and determinants of airborne bacterial concentrations in school classrooms. Journal of Occupational and Environmental Hygiene, 1(10): 639–647
CrossRef Google scholar
[8]
Be N A, Thissen J B, Fofanov V Y, Allen J E, Rojas M, Golovko G, Fofanov Y, Koshinsky H, Jaing C J. (2015). Metagenomic analysis of the airborne environment in urban spaces. Microbial Ecology, 69(2): 346–355
CrossRef Google scholar
[9]
Bekki K, Ito T, Yoshida Y, He C, Arashidani K, He M, Sun G, Zeng Y, Sone H, Kunugita N. . (2016). PM2.5 collected in China causes inflammatory and oxidative stress responses in macrophages through the multiple pathways. Environmental Toxicology and Pharmacology, 45: 362–369
CrossRef Google scholar
[10]
Borlée F, Yzermans C J, Aalders B, Rooijackers J, Krop E, Maassen C B, Schellevis F, Brunekreef B, Heederik D, Smit L A. (2017). Air pollution from livestock farms is associated with airway obstruction in neighboring residents. American Journal of Respiratory and Critical Care Medicine, 196(9): 1152–1161
CrossRef Google scholar
[11]
Brooks J P, McLaughlin M R, Scheffler B, Miles D M. (2010). Microbial and antibiotic resistant constituents associated with biological aerosols and poultry litter within a commercial poultry house. Science of the Total Environment, 408(20): 4770–4777
CrossRef Google scholar
[12]
Calderón-Garcidueñas L, Vojdani A, Blaurock-Busch E, Busch Y, Friedle A, Franco-Lira M, Sarathi-Mukherjee P, Martínez-Aguirre X, Park S B, Torres-Jardón R. . (2015). Air pollution and children: neural and tight junction antibodies and combustion metals, the role of barrier breakdown and brain immunity in neurodegeneration. Journal of Alzheimer’s Disease, 43(3): 1039–1058
CrossRef Google scholar
[13]
Carey J B, Lacey R E, Mukhtar S. (2004). A review of literature concerning odors, ammonia, and dust from broiler production facilities: 2. flock and house management factors. Journal of Applied Poultry Research, 13(3): 509–513
CrossRef Google scholar
[14]
Chen H, Yan H, Xiu Y, Jiang L, Zhang J, Chen G, Yu X, Zhu H, Zhao X, Li Y. . (2022). Seasonal dynamics in bacterial communities of closed-cage broiler houses. Frontiers in Veterinary Science, 9: 1019005
CrossRef Google scholar
[15]
Chen L, Song Z, Zhou X, Yang G, Yu G. (2024). Pathogenic bacteria and fungi in bioaerosols from specialized hospitals in Shandong Province, East China. Environmental Pollution, 341: 122922
CrossRef Google scholar
[16]
Chien Y C, Chen C J, Lin T H, Chen S H, Chien Y C. (2011). Characteristics of microbial aerosols released from chicken and swine feces. Journal of the Air & Waste Management Association, 61(8): 882–889
CrossRef Google scholar
[17]
Corner L A (2006). The role of wild animal populations in the epidemiology of tuberculosis in domestic animals: How to assess the risk? Veterinary Microbiology, 112(2–4): 303–312
[18]
Corzo C A, Culhane M, Dee S, Morrison R B, Torremorell M. (2013). Airborne detection and quantification of swine influenza A virus in air samples collected inside, outside and downwind from swine barns. PLoS One, 8(8): e71444
CrossRef Google scholar
[19]
Cowling B J, Ip D K, Fang V J, Suntarattiwong P, Olsen S J, Levy J, Uyeki T M, Leung G M, Malik Peiris J S, Chotpitayasunondh T. . (2013). Aerosol transmission is an important mode of influenza A virus spread. Nature Communications, 4(1): 1935
CrossRef Google scholar
[20]
Cui H, Zhang C, Liu J, Dong S, Zhao K, Chen L, Chen Z, Sun Y, Guo Z. (2022). The distribution characteristics of aerosol bacteria in different types of pig houses. Animals, 12(12): 1540
CrossRef Google scholar
[21]
Cuong N V, Padungtod P, Thwaites G, Carrique-Mas J J. (2018). Antimicrobial usage in animal production: a review of the literature with a focus on low- and middle-income countries. Antibiotics, 7(3): 75
CrossRef Google scholar
[22]
Cyprowski M, Ławniczek-Wałczyk A, Gołofit-Szymczak M, Frączek K, Kozdrój J, Górny R L. (2019). Bacterial aerosols in a municipal landfill environment. Science of the Total Environment, 660: 288–296
CrossRef Google scholar
[23]
de Rooij M M, Hoek G, Schmitt H, Janse I, Swart A, Maassen C B M, Schalk M, Heederik D J, Wouters I M. (2019). Insights into livestock-related microbial concentrations in air at residential level in a livestock dense area. Environmental Science & Technology, 53(13): 7746–7758
CrossRef Google scholar
[24]
Deng X, Zhang F, Rui W, Long F, Wang L, Feng Z, Chen D, Ding W. (2013). PM2.5-induced oxidative stress triggers autophagy in human lung epithelial A549 cells. Toxicology In Vitro, 27(6): 1762–1770
CrossRef Google scholar
[25]
Douglas P, Robertson S, Gay R, Hansell A L, Gant T W. (2018). A systematic review of the public health risks of bioaerosols from intensive farming. International Journal of Hygiene and Environmental Health, 221(2): 134–173
CrossRef Google scholar
[26]
Douwes J, Thorne P, Pearce N, Heederik D. (2003). Bioaerosol health effects and exposure assessment: progress and prospects. Annals of Occupational Hygiene, 47: 187–200
[27]
Duan H, Chai T, Liu J, Zhang X, Qi C, Gao J, Wang Y, Cai Y, Miao Z, Yao M. . (2009). Source identification of airborne Escherichia coli of swine house surroundings using ERIC-PCR and REP-PCR. Environmental Research, 109(5): 511–517
CrossRef Google scholar
[28]
Edgar R C. (2018). Accuracy of taxonomy prediction for 16S rRNA and fungal ITS sequences. PeerJ, 6: e4652
CrossRef Google scholar
[29]
Elmberg J, Berg C, Lerner H, Waldenström J, Hessel R. (2017). Potential disease transmission from wild geese and swans to livestock, poultry and humans: a review of the scientific literature from a one health perspective. Infection Ecology & Epidemiology, 7(1): 1300450
CrossRef Google scholar
[30]
Fiegel J, Clarke R, Edwards D A. (2006). Airborne infectious disease and the suppression of pulmonary bioaerosols. Drug Discovery Today, 11(1–2): 51–57
CrossRef Google scholar
[31]
Fu X, Ou Z, Zhang M, Meng Y, Li Y, Wen J, Hu Q, Zhang X, Norbäck D, Deng Y. . (2021). Indoor bacterial, fungal and viral species and functional genes in urban and rural schools in Shanxi Province, China–association with asthma, rhinitis and rhinoconjunctivitis in high school students. Microbiome, 9(1): 138
CrossRef Google scholar
[32]
Grydaki N, Colbeck I, Mendes L, Eleftheriadis K, Whitby C. (2021). Bioaerosols in the Athens Metro: metagenetic insights into the PM10 microbiome in a naturally ventilated subway station. Environment International, 146: 106186
CrossRef Google scholar
[33]
Guo Y, Xiao X, Zhao Y, Liu J, Zhou J, Sun B, Liang Y. (2022). Antibiotic resistance genes in manure-amended paddy soils across eastern China: occurrence and influencing factors. Frontiers of Environmental Science & Engineering, 16(7): 91
CrossRef Google scholar
[34]
Han Y, Yang T, Chen T, Li L, Liu J. (2019). Characteristics of submicron aerosols produced during aeration in wastewater treatment. Science of the Total Environment, 696: 134019
CrossRef Google scholar
[35]
Hao H, Li C, Qiu Y, Wang F, Ai W, Gao J, Wei L, Li X, Sun L, Wu J. . (2014). Generation, transmission and infectiosity of chicken MDV aerosols under experimental conditions. Veterinary Microbiology, 172(3–4): 400–406
CrossRef Google scholar
[36]
He M, Ichinose T, Yoshida Y, Arashidani K, Yoshida S, Takano H, Sun G, Shibamoto T. (2017). Urban PM2.5 exacerbates allergic inflammation in the murine lung via a TLR2/TLR4/MyD88-signaling pathway. Scientific Reports, 7(1): 11027
CrossRef Google scholar
[37]
HeYYuanQ MathieuJStadler LSenehiNSunRAlvarezP J J (2020). Antibiotic resistance genes from livestock waste: occurrence, dissemination, and treatment. npj Clean Water, 3: 4
[38]
Hong P Y, Li X, Yang X, Shinkai T, Zhang Y, Wang X, Mackie R I. (2012). Monitoring airborne biotic contaminants in the indoor environment of pig and poultry confinement buildings. Environmental Microbiology, 14(6): 1420–1431
CrossRef Google scholar
[39]
Hu Y, Cheng H, Tao S. (2017). Environmental and human health challenges of industrial livestock and poultry farming in China and their mitigation. Environment International, 107: 111–130
CrossRef Google scholar
[40]
Islam M A, Ikeguchi A, Naide T. (2020). Influence of temperature and humidity on the dynamics of aerosol numbers and airborne bacteria in a dairy calf house. Biosystems Engineering, 194: 213–226
CrossRef Google scholar
[41]
Jahne M A, Rogers S W, Holsen T M, Grimberg S J, Ramler I P. (2015). Emission and dispersion of bioaerosols from dairy manure application sites: human health risk assessment. Environmental Science & Technology, 49(16): 9842–9849
CrossRef Google scholar
[42]
Ji L, Zhang Q, Fu X, Zheng L, Dong J, Wang J, Guo S. (2019). Feedback of airborne bacterial consortia to haze pollution with different PM2.5 levels in typical mountainous terrain of Jinan, China. Science of the Total Environment, 695: 133912
CrossRef Google scholar
[43]
Jiang L, Li M, Tang J, Zhao X, Zhang J, Zhu H, Yu X, Li Y, Feng T, Zhang X. (2018a). Effect of different disinfectants on bacterial aerosol diversity in poultry houses. Frontiers in Microbiology, 9: 2113
CrossRef Google scholar
[44]
Jiang L, Zhang J, Tang J, Li M, Zhao X, Zhu H, Yu X, Li Y, Feng T, Zhang X. (2018b). Analyses of aerosol concentrations and bacterial community structures for closed cage broiler houses at different broiler growth stages in winter. Journal of Food Protection, 81(9): 1557–1564
CrossRef Google scholar
[45]
Just N, Kirychuk S, Gilbert Y, Létourneau V, Veillette M, Singh B, Duchaine C. (2011). Bacterial diversity characterization of bioaerosols from cage-housed and floor-housed poultry operations. Environmental Research, 111(4): 492–498
CrossRef Google scholar
[46]
Just N A, Létourneau V, Kirychuk S P, Singh B, Duchaine C. (2012). Potentially pathogenic bacteria and antimicrobial resistance in bioaerosols from cage-housed and floor-housed poultry operations. Annals of Occupational Hygiene, 56: 440–449
[47]
Kim K Y, Ko H J. (2019). Indoor distribution characteristics of airborne bacteria in pig buildings as influenced by season and housing type. Asian-Australasian Journal of Animal Sciences, 32(5): 742–747
CrossRef Google scholar
[48]
Kristiansen A, Saunders A M, Hansen A A, Nielsen P H, Nielsen J L. (2012). Community structure of bacteria and fungi in aerosols of a pig confinement building. FEMS Microbiology Ecology, 80(2): 390–401
CrossRef Google scholar
[49]
Kumari P, Choi H L. (2014). Seasonal variability in airborne biotic contaminants in swine confinement buildings. PLoS One, 9(11): e112897
CrossRef Google scholar
[50]
Lawniczek-Walczyk A, Górny R L, Golofit-Szymczak M, Niesler A, Wlazlo A. (2013). Occupational exposure to airborne microorganisms, endotoxins and β-glucans in poultry houses at different stages of the production cycle. Annals of Agricultural and Environmental Medicine, 20: 259–268
[51]
Lee G, Yoo K. (2022). A review of the emergence of antibiotic resistance in bioaerosols and its monitoring methods. Reviews in Environmental Science and Biotechnology, 21(3): 799–827
CrossRef Google scholar
[52]
Li M, Wei X, Li Y, Feng T, Jiang L, Zhu H, Yu X, Tang J, Chen G, Zhang J. . (2020). PM2.5 in poultry houses synergizes with pseudomonas aeruginosa to aggravate lung inflammation in mice through the NF-κB pathway. Journal of Veterinary Science, 21(3): e46
CrossRef Google scholar
[53]
Li T, Hu R, Chen Z, Li Q, Huang S, Zhu Z, Zhou L F. (2018). Fine particulate matter (PM2.5): the culprit for chronic lung diseases in China. Chronic Diseases and Translational Medicine, 4(3): 176–186
CrossRef Google scholar
[54]
Liu H, Zhang X, Zhang H, Yao X, Zhou M, Wang J, He Z, Zhang H, Lou L, Mao W. . (2018). Effect of air pollution on the total bacteria and pathogenic bacteria in different sizes of particulate matter. Environmental Pollution, 233: 483–493
CrossRef Google scholar
[55]
Liu Y, Zhang X, Qi W, Yang Y, Liu Z, An T, Wu X, Chen J. (2021). Prevention and control strategies of african swine fever and progress on pig farm repopulation in China. Viruses, 13(12): 2552
CrossRef Google scholar
[56]
Lloyd L C, Etheridge J R. (1983). Contagious bovine pleuropneumonia produced by aerosols artificially generated from cultures of Mycoplasma mycoides subsp. mycoides. British Veterinary Journal, 139(4): 330–337
CrossRef Google scholar
[57]
Loor J J, Elolimy A A, McCann J C. (2016). Dietary impacts on rumen microbiota in beef and dairy production. Animal Frontiers, 6(3): 22–29
CrossRef Google scholar
[58]
Lou C, Bai Y, Chai T, Yu H, Lin T, Hu G, Guan Y, Wu B. (2022). Research progress on distribution and exposure risk of microbial aerosols in animal houses. Frontiers in Veterinary Science, 9: 1015238
CrossRef Google scholar
[59]
Madsen A M. (2006). Airborne endotoxin in different background environments and seasons. Annals of agricultural and environmental medicine. Annals of Agricultural and Environmental Medicine, 13: 81–86
[60]
Manor O, Borenstein E. (2017). Systematic characterization and analysis of the taxonomic drivers of functional shifts in the human microbiome. Cell Host & Microbe, 21(2): 254–267
CrossRef Google scholar
[61]
Matković K, Vucemilo M, Stokovic I, Simic R, Marusic D, Vinkovic B, Matkovic S. (2013). Concentrations of airborne bacteria and fungi in a livestock building with caged laying hens. Veterinary Archives, 83: 413
[62]
Mbareche H, Veillette M, Bilodeau G J, Duchaine C. (2019). Fungal aerosols at dairy farms using molecular and culture techniques. Science of the Total Environment, 653: 253–263
CrossRef Google scholar
[63]
McEachran A D, Blackwell B R, Hanson J D, Wooten K J, Mayer G D, Cox S B, Smith P N. (2015). Antibiotics, bacteria, and antibiotic resistance genes: aerial transport from cattle feed yards via particulate matter. Environmental Health Perspectives, 123(4): 337–343
CrossRef Google scholar
[64]
Mehdi Y, Létourneau-Montminy M P, Gaucher M L, Chorfi Y, Suresh G, Rouissi T, Brar S K, Côté C, Ramirez A A, Godbout S. (2018). Use of antibiotics in broiler production: global impacts and alternatives. Animal Nutrition, 4(2): 170–178
CrossRef Google scholar
[65]
Meng K, Wu B, Gao J, Cai Y, Yao M, Wei L, Chai T. (2016). Immunity-related protein expression and pathological lung damage in mice poststimulation with ambient particulate matter from live bird markets. Frontiers in Immunology, 7: 252
CrossRef Google scholar
[66]
Miao Z, Chai T, Qi C, Cai Y, Liu J, Yuan W, Yao M. (2010). Composition and variability of airborne fungi in an enclosed rabbit house in China. Aerobiologia, 26(2): 135–140
CrossRef Google scholar
[67]
Mullany P. (2014). Functional metagenomics for the investigation of antibiotic resistance. Virulence, 5(3): 443–447
CrossRef Google scholar
[68]
Nair A T. (2021). Bioaerosols in the landfill environment: an overview of microbial diversity and potential health hazards. Aerobiologia, 37(2): 185–203
CrossRef Google scholar
[69]
Pacheco J M, Arzt J, Rodriguez L L. (2010). Early events in the pathogenesis of foot-and-mouth disease in cattle after controlled aerosol exposure. Veterinary Journal, 183(1): 46–53
CrossRef Google scholar
[70]
Pak H, King M. (2022). Impact of seasonal variations on microbiome diversity and antibiotic resistance in aerosolized bacteria in a dairy facility. Journal of Aerosol Science, 166: 106046
CrossRef Google scholar
[71]
Pavan R, Manjunath K. (2014). Qualitative analysis of indoor and outdoor airborne fungi in cowshed. Journal of Mycology, 2014: 1–8
CrossRef Google scholar
[72]
Pei Y, Jiang R, Zou Y, Wang Y, Zhang S, Wang G, Zhao J, Song W. (2016). Effects of fine particulate matter (PM2.5) on systemic oxidative stress and cardiac function in ApoE−/− mice. International Journal of Environmental Research and Public Health, 13(5): 484
CrossRef Google scholar
[73]
PieckováE (2017). Indoor microbial aerosol and its health effects: microbial exposure in public buildings–viruses, bacteria, and fungi. In: Viegas C, Viegas S, Gomes A, Täubel M, Sabino R, eds. Exposure to Microbiological Agents in Indoor and Occupational Environments. Cham: Springer
[74]
Pileri E, Mateu E. (2016). Review on the transmission porcine reproductive and respiratory syndrome virus between pigs and farms and impact on vaccination. Veterinary Research, 47(1): 108
CrossRef Google scholar
[75]
Pirie R S, Collie D D, Dixon P M, McGorum B C. (2003). Inhaled endotoxin and organic dust particulates have synergistic proinflammatory effects in equine heaves (organic dust-induced asthma). Clinical and Experimental Allergy, 33(5): 676–683
CrossRef Google scholar
[76]
Radon K, Danuser B, Iversen M, Monso E, Weber C, Hartung J, Donham K, Palmgren U, Nowak D. (2002). Air contaminants in different European farming environments. Annals of Agricultural and Environmental Medicine, 9: 41–48
[77]
Ruzal M, Shinder D, Malka I, Yahav S. (2011). Ventilation plays an important role in hens’ egg production at high ambient temperature. Poultry Science, 90(4): 856–862
CrossRef Google scholar
[78]
Rysz M, Alvarez P J. (2004). Amplification and attenuation of tetracycline resistance in soil bacteria: aquifer column experiments. Water Research, 38(17): 3705–3712
CrossRef Google scholar
[79]
Samake A, Uzu G, Martins J M, Calas A, Vince E, Parat S, Jaffrezo J L. (2017). The unexpected role of bioaerosols in the oxidative potential of PM. Scientific Reports, 7(1): 10978
CrossRef Google scholar
[80]
Sancheza H M, Echeverria C, Thulsiraj V, Zimmer-Faust A, Flores A, Laitz M, Healy G, Mahendra S, Paulson S E, Zhu Y. . (2016). Antibiotic resistance in airborne bacteria near conventional and organic beef cattle farms in California, USA. Water, Air, and Soil Pollution, 227: 280
CrossRef Google scholar
[81]
Sapkota A R, Ojo K K, Roberts M C, Schwab K J. (2006). Antibiotic resistance genes in multidrug-resistant Enterococcus spp. and Streptococcus spp. recovered from the indoor air of a large-scale swine-feeding operation. Letters in Applied Microbiology, 43(5): 534–540
CrossRef Google scholar
[82]
Schmitt H, Stoob K, Hamscher G, Smit E, Seinen W. (2006). Tetracyclines and tetracycline resistance in agricultural soils: microcosm and field studies. Microbial Ecology, 51(3): 267–276
CrossRef Google scholar
[83]
Shang M, Kong Y, Yang Z, Cheng R, Zheng X, Liu Y, Chen T. (2023). Removal of virus aerosols by the combination of filtration and UV-C irradiation. Frontiers of Environmental Science & Engineering, 17(3): 27
CrossRef Google scholar
[84]
Sharma J, Parsai K, Raghuwanshi P, Ali S A, Tiwari V, Bhargava A, Mishra P K. (2021). Emerging role of mitochondria in airborne particulate matter-induced immunotoxicity. Environmental Pollution, 270: 116242
CrossRef Google scholar
[85]
Sigurdarson S T, Kline J N. (2006). School proximity to concentrated animal feeding operations and prevalence of asthma in students. Chest, 129(6): 1486–1491
CrossRef Google scholar
[86]
Song L, Wang C, Jiang G, Ma J, Li Y, Chen H, Guo J. (2021). Bioaerosol is an important transmission route of antibiotic resistance genes in pig farms. Environment International, 154: 106559
CrossRef Google scholar
[87]
Song Z, Cai Y, Liu G, Yu G. (2023). Fungal aerosols in rabbit breeding environment: metagenetic insight into PM2.5 based on third-generation sequencing technology. Environmental Research, 224: 115480
CrossRef Google scholar
[88]
SunD Q (2021). Characteristics, hazards and control measures of microbial aerosols in poultry houses. Livestock and Poultry Industry, 32: 33–36 (in Chinese)
[89]
Tang Q, Huang K, Liu J, Jin X, Li C. (2021). Distribution characteristics of bioaerosols inside pig houses and the respiratory tract of pigs. Ecotoxicology and Environmental Safety, 212: 112006
CrossRef Google scholar
[90]
Thomas R J. (2013). Particle size and pathogenicity in the respiratory tract. Virulence, 4(8): 847–858
CrossRef Google scholar
[91]
Tisoncik J R, Korth M J, Simmons C P, Farrar J, Martin T R, Katze M G. (2012). Into the eye of the cytokine storm. Microbiology and Molecular Biology Reviews, 76(1): 16–32
CrossRef Google scholar
[92]
Traverse M, Aceto H. (2015). Environmental cleaning and disinfection. Veterinary Clinics of North America. Small Animal Practice, 45(2): 299–330
CrossRef Google scholar
[93]
Uyaguari-Diaz M I, Chan M, Chaban B L, Croxen M A, Finke J F, Hill J E, Peabody M A, Van Rossum T, Suttle C A, Brinkman F S. (2016). A comprehensive method for amplicon-based and metagenomic characterization of viruses, bacteria, and eukaryotes in freshwater samples. Microbiome, 4(1): 20
CrossRef Google scholar
[94]
Vidic J, Manzano M, Chang C M, Jaffrezic-Renault N. (2017). Advanced biosensors for detection of pathogens related to livestock and poultry. Veterinary Research, 48(1): 11
CrossRef Google scholar
[95]
Vučemilo M, Matković K, Vinković B, Jakšić S, Granić K, Mas N. (2007). The effect of animal age on air pollutant concentration in a broiler house. Czech Journal of Animal Science, 52(6): 170–174
CrossRef Google scholar
[96]
Wang H, Xu J, Liu X, Sheng L, Zhang D, Li L, Wang A. (2018). Study on the pollution status and control measures for the livestock and poultry breeding industry in Northeastern China. Environmental Science and Pollution Research International, 25(5): 4435–4445
CrossRef Google scholar
[97]
Wang M, Peng S, Liu D, Long D, Liu Z, Pu S. (2023a). Characteristics and traceability analysis of microbial assemblage in fine particulate matter from a pig house. Animals, 13(6): 1058
CrossRef Google scholar
[98]
Wang K, Shen D, Dai P, Li C. (2023b). Particulate matter in poultry house on poultry respiratory disease: a systematic review. Poultry Science, 102(4): 102556
CrossRef Google scholar
[99]
Wang W, Dang G, Khan I, Ye X, Liu L, Zhong R, Chen L, Ma T, Zhang H. (2022). Bacterial community characteristics shaped by artificial environmental PM2.5 control in intensive broiler houses. International Journal of Environmental Research and Public Health, 20(1): 723
CrossRef Google scholar
[100]
Wei K, Zheng Y, Li J, Shen F, Zou Z, Fan H, Li X, Wu C, Yao M. (2015). Microbial aerosol characteristics in highly polluted and near-pristine environments featuring different climatic conditions. Science Bulletin, 60(16): 1439–1447
CrossRef Google scholar
[101]
Weichenthal S A, Godri-Pollitt K, Villeneuve P J. (2013). PM2.5, oxidant defence and cardiorespiratory health. Reviews on Environmental Health, 12: 40
CrossRef Google scholar
[102]
Weinmaier T, Probst A J, La Duc M T, Ciobanu D, Cheng J F, Ivanova N, Rattei T, Vaishampayan P. (2015). A viability-linked metagenomic analysis of cleanroom environments: eukarya, prokaryotes, and viruses. Microbiome, 3(1): 62
CrossRef Google scholar
[103]
Wing S, Wolf S. (2000). Intensive livestock operations, health, and quality of life among eastern North Carolina residents. Environmental Health Perspectives, 108(3): 233–238
CrossRef Google scholar
[104]
Wu B, Duan H, Qi Q, Cai Y, Zhong Z, Chai T. (2018). Identifying virulence factor genes in E. coli in animal houses and their transmission to outside environments. Journal of Aerosol Science, 117: 189–199
CrossRef Google scholar
[105]
Wu B, Lou C, Chen Z, Chai T, Yu H. (2023). Combined 16S and internal transcribed spacer analysis revealed the effect of time on microbial community in animal house. Poultry Science, 102(11): 103039
CrossRef Google scholar
[106]
Wu B, Meng K, Wei L, Cai Y, Chai T. (2017). Seasonal fluctuations of microbial aerosol in live poultry markets and the detection of endotoxin. Frontiers in Microbiology, 8: 551
CrossRef Google scholar
[107]
Wu B, Qin L, Wang M, Zhou T, Dong Y, Chai T. (2019a). The composition of microbial aerosols, PM2.5, and PM10 in a duck house in Shandong Province, China. Poultry Science, 98(11): 5913–5924
CrossRef Google scholar
[108]
Wu B, Qi Q, Zhang X, Cai Y, Yu G, Lv J, Gao L, Wei L, Chai T. (2019b). Dissemination of Escherichia coli carrying plasmid-mediated quinolone resistance (PMQR) genes from swine farms to surroundings. Science of the Total Environment, 665: 33–40
CrossRef Google scholar
[109]
Wu S, Tang M, Wang Y, Ma Z, Ma Y. (2022). Analysis of the spatial distribution characteristics of livestock and poultry farming pollution and assessment of the environmental pollution load in Anhui Province. Sustainability, 14(7): 4165
CrossRef Google scholar
[110]
Xin H, Gao M, Wang X, Qiu T, Guo Y, Zhang L. (2022). Animal farms are hot spots for airborne antimicrobial resistance. Science of the Total Environment, 851: 158050
CrossRef Google scholar
[111]
Xiong W, Wang Y, Sun Y, Ma L, Zeng Q, Jiang X, Li A, Zeng Z, Zhang T. (2018). Antibiotic-mediated changes in the fecal microbiome of broiler chickens define the incidence of antibiotic resistance genes. Microbiome, 6(1): 34
CrossRef Google scholar
[112]
Xu C, Kong L, Liao Y, Tian Y, Wu Q, Liu H, Wang X. (2022). Mini-review: antibiotic-resistant Escherichia coli from farm animal-associated sources. Antibiotics, 11(11): 1535
CrossRef Google scholar
[113]
Yan H, Chen H, Jiang L, Zhang J, Chen G, Yu X, Zhu H, Zhao X, Li Y, Tang W. . (2023). Spatial distribution of airborne bacterial communities in caged poultry houses. Journal of the Air & Waste Management Association, 73(5): 417–427
CrossRef Google scholar
[114]
Yang F, Gao Y, Zhao H, Li J, Cheng X, Meng L, Dong P, Yang H, Chen S, Zhu J. (2021). Revealing the distribution characteristics of antibiotic resistance genes and bacterial communities in animal-aerosol-human in a chicken farm: from one-health perspective. Ecotoxicology and Environmental Safety, 224: 112687
CrossRef Google scholar
[115]
Yang J, Huo T, Zhang X, Ma J, Wang Y, Dong F, Deng J. (2018a). Oxidative stress and cell cycle arrest induced by short-term exposure to dust fall PM2.5 in A549 cells. Environmental Science and Pollution Research International, 25(23): 22408–22419
CrossRef Google scholar
[116]
Yang W, Guo M, Liu G, Yu G, Wang P, Wang H, Chai T. (2018b). Detection and analysis of fine particulate matter and microbial aerosol in chicken houses in Shandong Province, China. Poultry. Poultry Science, 97(3): 995–1005
CrossRef Google scholar
[117]
Yang Y, Zhang R, Lou Z. (2022). Bioaerosol emissions variations in large-scale landfill region and their health risk impacts. Frontiers of Environmental Science & Engineering, 16(12): 158
CrossRef Google scholar
[118]
Yu G L, Wei L M, Liu Y Y, Liu J Y, Wang Y, Gao J, Chai T J, Cai Y M. (2016a). Influence of indoor microbial aerosol on the welfare of meat ducks. British Poultry Science, 57(1): 12–22
CrossRef Google scholar
[119]
Yu G, Wang Y, Wang S, Duan C, Wei L, Gao J, Chai T, Cai Y. (2016b). Effects of microbial aerosol in poultry house on meat ducks’ immune function. Frontiers in Microbiology, 7: 1245
CrossRef Google scholar
[120]
Yu G L, Chai T J, Cai Y M. (2016c). Effect of solid formaldehyde fumigation on the microbial aerosol livestock and poultry house. Chinese Journal of Veterinary Science, 36: 1718–1721
CrossRef Google scholar
[121]
ZhangBGuo K KChenL GCuiHZhangC BaiXDongS S (2020). Research progress on microbial aerosols in livestock houses. Heilongjiang Animal Science and Veterinary Medicine, 7: 38-41 (in Chinese)
[122]
Zhang J, Li Y, Xu E, Jiang L, Tang J, Li M, Zhao X, Chen G, Zhu H, Yu X. . (2019a). Bacterial communities in PM2.5 and PM10 in broiler houses at different broiler growth stages in spring. Polish Journal of Veterinary Sciences, 22: 495–504
CrossRef Google scholar
[123]
Zhang J, Wei X, Jiang L, Li Y, Li M, Zhu H, Yu X, Tang J, Chen G, Zhang X. (2019b). Bacterial community diversity in particulate matter (PM2.5 and PM10) within broiler houses in different broiler growth stages under intensive rearing conditions in summer. Journal of Applied Poultry Research, 28(2): 479–489
CrossRef Google scholar
[124]
Zhang T, Zhang X X, Ye L. (2011). Plasmid metagenome reveals high levels of antibiotic resistance genes and mobile genetic elements in activated sludge. PLoS One, 6(10): e26041
CrossRef Google scholar
[125]
Zhao C, Pu W, Niu M, Wazir J, Song S, Wei L, Li L, Su Z, Wang H. (2022). Respiratory exposure to PM2.5 soluble extract induced chronic lung injury by disturbing the phagocytosis function of macrophage. Environmental Science and Pollution Research International, 29(10): 13983–13997
CrossRef Google scholar
[126]
Zhao J, Gao Z, Tian Z, Xie Y, Xin F, Jiang R, Kan H, Song W. (2013). The biological effects of individual-level PM2.5 exposure on systemic immunity and inflammatory response in traffic policemen. Occupational and Environmental Medicine, 70(6): 426–431
CrossRef Google scholar
[127]
Zhong S, Zhang L, Jiang X, Gao P. (2019). Comparison of chemical composition and airborne bacterial community structure in PM2.5 during haze and non-haze days in the winter in Guilin, China. Science of the Total Environment, 655: 202–210
CrossRef Google scholar
[128]
Zhu Y G, Johnson T A, Su J Q, Qiao M, Guo G X, Stedtfeld R D, Hashsham S A, Tiedje J M. (2013). Diverse and abundant antibiotic resistance genes in Chinese swine farms. Proceedings of the National Academy of Sciences of the United States of America, 110(9): 3435–3440
CrossRef Google scholar
[129]
Zucker B A, Trojan S, Müller W. (2000). Airborne gram-negative bacterial flora in animal houses. Journal of Veterinary Medicine. B, Infectious Diseases and Veterinary Public Health, 47(1): 37–46
CrossRef Google scholar

CRediT Authorship Contribution Statement

Guanliu Yu: project administration, conceptualization and writing, review and editing. Xilong Wang and Zhicheng Song: original draft preparation and visualization. Yumei Cai: project administration and supervision. All the authors contributed to the review article and approved the submitted version.

Acknowledgements

This work was supported by the National Natural Science Foundation of China (Grant No. 32300087) and the Poultry Innovation Team Environmental Control Post Expert (China) (SDAIT-11-09).

Conflict Interests

The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Data Availability

No data was used for the research described in the article.

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