Skull ethnic classification by combining skull auxiliary image with deep learning

Huijie Sun, Junli Zhao, Chengyuan Wang, Yi Li, Niankai Zhang, Mingquan Zhou

PDF(2967 KB)
PDF(2967 KB)
Quant. Biol. ›› 2022, Vol. 10 ›› Issue (4) : 381-389. DOI: 10.15302/J-QB-021-0269
RESEARCH ARTICLE
RESEARCH ARTICLE

Skull ethnic classification by combining skull auxiliary image with deep learning

Author information +
History +

Abstract

Background: China is a multi-ethnic country. It is of great significance for the skull identification to realize the skull ethnic classification through computers, which can promote the development of forensic anthropology and accelerate the exploration of national development.

Methods: In this paper, the 3D skull model is transformed into 2D auxiliary image including curvature, depth and elevation information, and then the deep learning method of the 2D auxiliary image is used for ethnic classification. We construct a convolution neural network structure inspired by VGGNet16 which has achieved excellent performance on image classification. In order to optimize the network, Adam algorithm is adopted to avoid falling into local minimum, and to ensure the stability of the algorithm with regularization terms.

Results: Experiments on 400 skull models have been conducted for ethnic classification by our method. We set different learning rates to compare the performance of the model, the highest accuracy of ethnic classification is 98.75%, which have better performance than other five classical neural network structures.

Conclusions: Deep learning based on skull auxiliary image for skull ethnic classification is an automatic and effective method with great application significance.

Author summary

Skull ethnic classification is of great significance in anthropology, forensic science and archaeology. We put forward a method of ethnic classification which combines deep learning with 2D skull auxiliary image containing depth, curvature and elevation information. The skull features are automatically extracted and classified by our network. Experimental results show that our method can obtain excellent performance of ethnic classification. In the future, we will extend the method to multi ethnic classification.

Graphical abstract

Keywords

skull auxiliary image / deep learning / skull ethnic classification / convolutional neural network

Cite this article

Download citation ▾
Huijie Sun, Junli Zhao, Chengyuan Wang, Yi Li, Niankai Zhang, Mingquan Zhou. Skull ethnic classification by combining skull auxiliary image with deep learning. Quant. Biol., 2022, 10(4): 381‒389 https://doi.org/10.15302/J-QB-021-0269

References

[1]
Zhang, Z. (1985). The physical characters of Zang (Tibetan) nationality. Acta Anthropologica Sinica (in Chinese), 4: 250–258
[2]
Zhang, Z. B. Zhang, J. (1983). Physical characters of Zhuang nationality in Guangxi. Acta Anthropologica Sinica (in Chinese), 2: 250–258
[3]
Zhang, Z. B. Zhang, J. (1982). Anthropological studies on Li nationality in Hainan island. Acta Anthropologica Sinica (in Chinese), 1: 53–71
[4]
Ai, Q. H., Xiao, H., Zhao, J. X., Xu, Y. H. Sai, F. (1993). A survey on physical characteristics of Uigur nationality. Acta Anthropologica Sinica (in Chinese), 12: 63–71
[5]
Zheng, L. B., Zhu, Q., Wang, Q. L., Li, C. S., Li, W. H., Chen, Z. L., Yang, Z. C. Li, S. (1997). The physical characteristic of Hui nationality in Ningxia. Acta Anthropologica Sinica (in Chinese), 16: 11–21
[6]
Zhang, X., Yu, K., Bao, J., Wang, Z., Wu, Y., Song, G., (2011). A study of the physical characteristics of the Han people from Shouguang in Shangdong. Acta Anthropologica Sinica (in Chinese), 30: 206–217
[7]
Li, Y. L., Lu, S. H., Zheng, L. B., Li, Y. L., Li, Y. X., Guo, H., Cao, Y. (2011). Physical characteristics of the Han people in Jiangxi. Acta Anatomica Sinica (in Chinese), 43: 132–141
[8]
Zheng, L. B., Wu, Y. W., Zhang, X. H., Li, X., Liao, Y., Hu, Y., Wang, Z. B. (2011). Physical characteristics of Han in Sichuan. Acta Anatomica Sinica (in Chinese), 42: 695–702
[9]
Li, Y., Liu, S. H. Zheng, L. (2013). Physical characteristics of Zhejiang Han. Acta Anatomica Sinica (in Chinese), 44: 707–716
[10]
Xiao, M. (1980). National image and anatomical structure—a study on the physical features of several ethnic minorities in Northwest China. Journal of Northwest University for Nationalities (in Chinese), 01: 86–93
[11]
Li, Z. J., Duan, X. D. Wang, C. (2015). Cluster analysis of facial geometric features for six Chinese nationalities. Journal of Dalian Nationalities University (in Chinese), 17: 73–76
[12]
Williams, B. A. (2006). Evaluating the accuracy and precision of cranial morphological traits for sex determination. J. Forensic Sci., 51: 729–735
CrossRef Google scholar
[13]
Walker, P. (2008). Sexing skulls using discriminant function analysis of visually assessed traits. Am. J. Phys. Anthropol., 136: 39–50
CrossRef Google scholar
[14]
Zhou, W. L. Wu, X. (2001). Observations of some non-metrical traits in the modern human skulls. Acta Anthropologica Sinica (in Chinese), 20: 42–48
[15]
Weinberg, S. M., Putz, D. A., Mooney, M. P. Siegel, M. (2005). Evaluation of non-metric variation in the crania of black and white perinates. Forensic Sci. Int., 151: 177–185
CrossRef Google scholar
[16]
Holland, T. (1986). Race determination of fragmentary crania by analysis of the cranial base. J. Forensic Sci., 31: 719–725
CrossRef Google scholar
[17]
can, M., (1999). Craniometric determination of population affinity in South Africans. Int. J. Legal. Med. 112, 91–97
[18]
Holliday, T. W. Falsetti, A. (1999). A new method for discriminating African-American from European-American skeletons using postcranial osteometrics reflective of body shape. J. Forensic Sci., 44: 926–930
CrossRef Google scholar
[19]
Gill, G. W., Hughes, S. S., Bennett, S. M. Gilbert, B. (1988). Racial identification from the midfacial skeleton with special reference to American Indians and whites. J. Forensic Sci., 33: 92–99
CrossRef Google scholar
[20]
Liu, Y. (2016). The sex determination of Han nationality in North China by adult facial skull X-ray. Chinese Journal of Forensic Sciences (in Chinese), V84: 26–31
[21]
Khaitan, T., Kabiraj, A., Ginjupally, U. (2017). Cephalometric analysis for gender determination using maxillary sinus index: a novel dimension in personal identification. Int. J. Dent., 2017: 7026796
CrossRef Google scholar
[22]
Franklin, D., Freedman, L. (2005). Sexual dimorphism and discriminant function sexing in indigenous South African crania. Homo, 55: 213–228
CrossRef Google scholar
[23]
Shui, W., Yin, R., Zhou, M., (2013). Sex determination from digital skull model for the Han people in China. Chinese Journal of Forensic Medicine (in Chinese), 28: 19–21
[24]
Amores-Ampuero, (2017). Sexual dimorphism in base of skull. Anthropol. Anz., 74: 9–14
CrossRef Google scholar
[25]
Small, C., Schepartz, L., Hemingway, J. (2018). Three-dimensionally derived interlandmark distances for sex estimation in intact and fragmentary crania. Forensic Sci. Int., 287: 127–135
CrossRef Google scholar
[26]
Maass, P. Friedling, L. (2019). Morphometric analysis of the neurocranium in an adult South African cadaveric sample. J. Forensic Sci., 64: 367–374
CrossRef Google scholar
[27]
Luo, L., Wang, M., Tian, Y., Duan, F., Wu, Z., Zhou, M. (2013). Automatic sex determination of skulls based on a statistical shape model. Comput. Math. Methods Med., 2013: 251628
CrossRef Google scholar
[28]
Yang, W., Liu, X. N. (2019). Automatic sex determination of skulls based on statistical shape model. Comput. Sci., 46: 282–287
[29]
LuoL.,ChangL.,LiuR.DuanF.. (2013) Morphological Investigations of Skulls for Sex Determination Based on Sparse Principal Component Analysis. Chinese Conference on Biometric Recognition, pp. 449−456. Berlin: Springer
[30]
Yang, W., Liu, X. N., Liu, X. L. Zhu, L. (2019). Skull sex identification using improved convolution neural network and least squares method. Acta Anthropologica Sinica (in Chinese), 38: 265–275
[31]
Yang, W., Liu, X. N., Wang, K. G., Hu, J. B., Geng, J. H. (2019). Sex determination of three-dimensional skull based on improved back propagation neural network. Comput. Math. Methods Med., 2019: 1–8
CrossRef Google scholar
[32]
Hefner, J. T., Spradley, M. K. (2014). Ancestry assessment using random forest modeling. J. Forensic Sci., 59: 583–589
CrossRef Google scholar
[33]
OakleyC.,BaiL.,LiaoI. Y.,ArigbabuO.AbdullahN.NoorM. H.. (2019) A novel method for race determination of human skulls. In: Pattern Recognition and Information Forensics (Zhang, Z., Suter, D., Tian, Y., Branzan Albu, A., Sidère, N., Jair Escalante, H. (eds.)). ICPR 2018. Lecture Notes in Computer Science, vol 11188. Cham: Springer
[34]
SunH.,ZhaoJ.,ZhengX.,ReziwanguliX.,. and Zhou, M., Q. (2020) Skull ethnic identification by combining features of skull morphology with neural network. Journal of Beijing University of Aeronautics and Astronautics (in Chinese), doi: 10.13700/j.bh.1001–5965.2020.0446
[35]
SimonyanK.. (2014) Very deep convolutional networks for large-scale image recognition. arXiv,1409.1556v6
[36]
Lecun, Y., Bottou, L., Bengio, Y. (1998). Gradient-based learning applied to document recognition. Proc. IEEE, 86: 2278–2324
CrossRef Google scholar
[37]
Krizhevsky, A., Sutskever, I. (2012). ImageNet classification with deep convolutional neural networks. In: Proceedings of the 25th International Conference on Neural Information Processing Systems, pp. 1097–1105
[38]
He, K. M., Zhang, X. Y., Ren, S. Q. (2016). Deep residual learning for image recognition. In: 2016 IEEE Conference on Computer Vision and Pattern Recognition, pp. 770–778
[39]
SzegedyC.,IoffeS.,VanhouckeV.. (2016) Inception-v4, inception-resnet and the impact of residual connections on learning. arXiv,1602.07261v2
[40]
Duan, F., Yang, Y., Li, Y., Tian, Y., Lu, K., Wu, Z., Zhou, M., (2014). Skull identification via correlation measure between skull and face shape. IEEE T. Inf. Foren. Sec., 9: 1322–1332
[41]
Lorense, W. (1987). Marching cubes: A high resolution 3D surface construction algorithm. In: Proceedings of the 14th annual conference on Computer graphics and interactive techniques, pp. 163–169
[42]
Hu, L. Y., Duan, F. Q., Yin, B. C., Zhou, M. Q., Sun, Y. F., Wu, Z. K. Geng, G. (2013). A hierarchical dense deformable model for 3D face reconstruction from skull. Multimedia Tools Appl., 64: 345–364
CrossRef Google scholar
[43]
Huang, R. K., Zhao, J. L., Duan, F. Q., Li, X., Liu, C. L., Deng, X. D., Pan, Z. K. Zhou, M. (2019). Automatic craniofacial registration based on radial curves. Comput. Graph., 82: 264–274
CrossRef Google scholar
[44]
Gilani, S. Z., Mian, A. (2017). Deep, dense and accurate 3D face correspondence for generating population specific deformable models. Pattern Recognit., 69: 238–250
CrossRef Google scholar
[45]
Galteri, L., Ferrari, C., Lisanti, G., Berretti, S. (2019). Deep 3D morphable model refinement via progressive growing of conditional generative adversarial networks. Comput. Vis. Image Underst., 185: 31–42
CrossRef Google scholar
[46]
Cohen-Steiner, D. Morvan, J. (2003). Restricted delaunay triangulations and normal cycle. In: Proceedings of the nineteenth annual symposium on Computational geometry, pp. 3121–321
[47]
KingmaD.. (2014) Adam: a method for stochastic optimization. arXiv,1412.6980v9

ACKNOWLEDGEMENTS

This work was partly supported by the National Statistical Science Research Project (2020LY100), the National Natural Science Foundation of China (Nos. 62172247 and 61702293), the Key Research and Development Plan—Major Scientific and Technological Innovation Projects of ShanDong Province (No. 2019JZZY020101). We thank the support of Xianyang Hospital and People’s Hospital of Toxon County for providing CT images.

COMPLIANCE WITH ETHICS GUIDELINES

The author Huijie Sun, Junli Zhao, Chengyuan Wang, Yi Li, Niankai Zhang and Mingquan Zhou declare that they have no conflict of interests.
Our research was approved by the Institutional Review Board (IRB) of the Image Center for Brain Research, National Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University and was performed in accordance with the ethical standards as laid down in the 1964 Declaration of Helsinki and its later amendments or comparable ethical standards.

OPEN ACCESS

This article is licensed by the CC By under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

RIGHTS & PERMISSIONS

2022 The Authors (2022). Published by Higher Education Press.
AI Summary AI Mindmap
PDF(2967 KB)

Accesses

Citations

Detail

Sections
Recommended

/