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Abstract
Background: The coronavirus pandemic (COVID-19) is causing a havoc globally, exacerbated by the newly discovered SARS-CoV-2 virus. Due to its high population density, India is one of the most badly effected countries from the first wave of COVID-19. Therefore, it is extremely necessary to accurately predict the state-wise and overall dynamics of COVID-19 to get the effective and efficient organization of resources across India.
Methods: In this study, the dynamics of COVID-19 in India and several of its selected states with different demographic structures were analyzed using the SEIRD epidemiological model. The basic reproductive ratio R 0 was systemically estimated to predict the dynamics of the temporal progression of COVID-19 in India and eight of its states, Andhra Pradesh, Chhattisgarh, Delhi, Gujarat, Madhya Pradesh, Maharashtra, Tamil Nadu, and Uttar Pradesh.
Results: For India, the SEIRD model calculations show that the peak of infection is expected to appear around the middle of October, 2020. Furthermore, we compared the model scenario to a Gaussian fit of the daily infected cases and obtained similar results. The early imposition of a nation-wide lockdown has reduced the number of infected cases but delayed the appearance of the infection peak significantly.
Conclusion: After comparing our calculations using India’s data to the real life dynamics observed in Italy and Russia, we can conclude that the SEIRD model can predict the dynamics of COVID-19 with sufficient accuracy.
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Keywords
COVID-19
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SARS-CoV-2
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epidemic
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statistical analysis
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SEIRD model
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Rudra Banerjee, Srijit Bhattacharjee, Pritish Kumar Varadwaj.
A study of the COVID-19 epidemic in India using the SEIRD model.
Quant. Biol., 2021, 9(3): 317-328 DOI:10.15302/J-QB-021-0260
| [1] |
WHO director-general’s remarks at the media briefing on covid-19. 2020). Accessed: 24 June, 2020
|
| [2] |
Joshi, A. and Paul, S. (2020) Phylogenetic analysis of the novel coronavirus reveals important variants in Indian strains. bioRxiv, 2020.04.14.041301
|
| [3] |
ObadiaT., Haneef, R. , Boëlle, P. Y.. The R0 package: a toolbox to estimate reproduction numbers for epidemic outbreaks. BMC Med. Inform. Decis. Mak., 2012, 12 : 147–
|
| [4] |
ZhangS., Diao, M., Yu, W., Pei, L., Lin, Z. , Chen, D.. Estimation of the reproductive number of novel coronavirus (COVID-19) and the probable outbreak size on the Diamond Princess cruise ship: A data-driven analysis. Int. J. Infect. Dis., 2020, 93 : 201– 204
|
| [5] |
GiordanoG., Blanchini, F., Bruno, R., Colaneri, P., Di Filippo, A., Di Matteo, A. , Colaneri, M.. Modelling the COVID-19 epidemic and implementation of population-wide interventions in Italy. Nat. Med., 2020, 26 : 855– 860
|
| [6] |
BiQ., Wu, Y., Mei, S., Ye, C., Zou, X., Zhang, Z., Liu, X., Wei, L., Truelove, S. A., Zhang, T.. Epidemiology and transmission of COVID-19 in 391 cases and 1286 of their close contacts in Shenzhen, China: a retrospective cohort study. Lancet Infect. Dis., 2020, 20 : 911– 919
|
| [7] |
PremW., K.J., Liu M., Y.Centre for the Mathematical Modelling of Infectious Diseases COVID-19 Working Group. The effect of control strategies to reduce social mixing on outcomes of the COVID-19 epidemic in Wuhan, China: a modelling study. Lancet Public Health, 2020, 5 : e261– e270
|
| [8] |
ParkM., Cook, A. R., Lim, J. T., Sun, Y. , Dickens, B. L.. A systematic review of COVID-19 epidemiology based on current evidence. J. Clin. Med., 2020, 9 : 967–
|
| [9] |
Covid-19 in india. Accessed: 10 June, 2020
|
| [10] |
Bhatnagar. Prudent public health intervention strategies to control the coronavirus disease 2019 transmission in India: A mathematical model-based approach. Indian J. Med. Res., 2020, 151 : 190– 199
|
| [11] |
LauerA., S.H., Grantz K., K.R., BiS., Q. G.. The incubation period of coronavirus disease 2019 (COVID-19) from publicly reported confirmed cases: estimation and application. Ann. Intern. Med., 2020, 172 : 577– 582
|
| [12] |
ChanF. W., J.H., Yuan K. W., S. C. Y., Kok W. S.. A familial cluster of pneumonia associated with the 2019 novel coronavirus indicating person-to-person transmission: a study of a family cluster. Lancet, 2020, 395 : 514– 523
|
| [13] |
BackerJ. A., Klinkenberg, D. , Wallinga, J.. Incubation period of 2019 novel coronavirus (2019-nCoV) infections among travellers from Wuhan, China, 20−28 January 2020. Euro Surveill., 2020, 25 : 2000062d–
|
| [14] |
Ferretti. Quantifying SARS-CoV-2 transmission suggests epidemic control with digital contact tracing. Science, 2020, 368 : eabb6936–
|
| [15] |
LiS. M., Q.H. Y., GuanY.. Early transmission dynamics in Wuhan, China, of novel coronavirus–infected pneumonia. N. Engl. J. Med., 2020, 382 : 1199– 1207
|
| [16] |
MandalM. , Mandal, S.. COVID-19 early pandemic scenario in India compared to China and rest of the world: a data driven and model analysis. World J. Advan. Res. Rev., 2020, 7 : 131– 140
|
| [17] |
Chatterjee, S., Sarkar, A., Chatterjee, S., Karmakar, M. and Paul, R. (2020) Studying the progress of COVID-19 outbreak in India using SIRD model. Indian J. Phys.,
|
| [18] |
Woelfel, R., Corman, V. M., Guggemos, W., Seilmaier, M., Zange, S., Mueller, M. A., Niemeyer, D., Vollmar, P., Rothe, C., Hoelscher, M., et al. (2020) Virological assessment of hospitalized cases of coronavirus disease 2019. medRxiv, 2020.03.05.20030502
|
| [19] |
YamauchiT., Takeuchi, S., Yamano, Y. , Nakadate, T.. Estimation of the effective reproduction number of influenza based on weekly reports in Miyazaki Prefecture. Sci. Rep., 2019, 9 : 2539–
|
| [20] |
Worldometers.info. Total coronavirus cases in india. Accessed: 12 June, 2020
|
| [21] |
WallingaJ. , Teunis, P.. Different epidemic curves for severe acute respiratory syndrome reveal similar impacts of control measures. Am. J. Epidemiol., 2004, 160 : 509– 516
|
| [22] |
Accessed: 12 June, 2020
|
| [23] |
Government of India. Covid-19 statewise status. Accessed: 10 June, 2020
|
| [24] |
Office of the Registrar General & Census Commissioner. India. Provisional population totals. Accessed: 10 June, 2020
|
| [25] |
Vynnycky, E. and White, R. (2010) An Introduction to Infectious Disease Modelling. London: Oxford University Press
|
| [26] |
Anderson, R. and Robert, M. (1992) Infectious Diseases of Humans. London: Oxford University Press
|
| [27] |
Cummings, D. and Lessler, J. (2007) Infectious disease dynamics. Accessed: 10 June, 2020
|
| [28] |
LipsitchM., M.K., Cohen C., T.H.. Transmission dynamics and control of severe acute respiratory syndrome. Science, 2003, 300 : 1966– 1970
|
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