Haplotype data of 23 Y-chromosome markers in Minnan Han Chinese and comparison with those of 12 Y-chromosome markers

Jie Shang , Sheng-ping Hu

Current Medical Science ›› 2015, Vol. 35 ›› Issue (3) : 456 -463.

PDF
Current Medical Science ›› 2015, Vol. 35 ›› Issue (3) : 456 -463. DOI: 10.1007/s11596-015-1453-y
Article

Haplotype data of 23 Y-chromosome markers in Minnan Han Chinese and comparison with those of 12 Y-chromosome markers

Author information +
History +
PDF

Abstract

We genotyped 23 Y-STR loci (DYS576, DYS389I, DYS448, DYS389II, DYS19, DYS391, DYS481, DYS549, DYS533, DYS438, DYS437, DYS570, DYS635, DYS390, DYS439, DYS392, DYS643, DYS393, DYS458, DYS385a/b, DYS456, and GATA-H4) in a sample of 109 unrelated male Chinese people residing in Minnan area and compared the results with those from our previous study on 12 Y-STR. The haplotype diversity and the discrimination capacity of the 23 Y-STR reached 0.9903 and 0.9725, respectively, and the genetic diversity for each locus ranged from 0.321 (DYS391) to 0.955 (DYS385). Besides, we observed a strong correlation between the number of Y-STR markers and the substantial improvement of forensic parameters used to discriminate between individuals. The results indicated that these highly polymorphic Y-STR markers were useful for human identification in forensic cases and paternity tests within the Minnan Han Chinese population.

Keywords

Y-STR / Minnan Han Chinese / comparison / off-ladder

Cite this article

Download citation ▾
Jie Shang, Sheng-ping Hu. Haplotype data of 23 Y-chromosome markers in Minnan Han Chinese and comparison with those of 12 Y-chromosome markers. Current Medical Science, 2015, 35(3): 456-463 DOI:10.1007/s11596-015-1453-y

登录浏览全文

4963

注册一个新账户 忘记密码

References

[1]

De KnijffP, KayserM, CagliàA, et al. . Chromosome Y microsatellites: population genetic and evolutionary aspects. Int J Legal Med, 1997, 110(3): 134-140 PMID: 9228564

[2]

KwakKD, JinHJ, ShinDJ, et al. . Y-chromosomal STR haplotypes and their applications to forensic and population studies in east Asia. Int J Legal Med, 2005, 119(4): 195-201 PMID: 15856270

[3]

RoewerL. Y chromosome STR typing in crime casework. Forensic Sci Med Pathol, 2009, 5(2): 77-84 PMID: 19455440

[4]

HaasC, ShvedN, RühliFJ, et al. . Y-chromosomal analysis identifies the skeletal remains of Swiss national hero Jörg Jenatsch (1596–1639). Forensic Sci Int Genet, 2013, 7(6): 610-617 PMID: 24035510

[5]

BallantyneKN, GoedbloedM, FangR, et al. . Mutability of Y-chromosomal microsatellites: rates, characteristics, molecular bases, and forensic implications. Am J Hum Genet, 2010, 87(3): 341-353 PMCID: 2933352 PMID: 20817138

[6]

RoewerL, KrawczakM, WilluweitS, et al. . Online reference database of European Y-chromosomal short tandem repeat (STR) haplotypes. Forensic Sci Int, 2001, 118(2): 106-113 PMID: 11311820

[7]

HuSP. Genetic polymorphism of 12 Y-chromosomal STR loci in the Minnan Han Chinese in Southeast China. Forensic Sci Int, 2006, 159(1): 77-82 PMID: 16026951

[8]

HuSP, WuDQ, XuXH, et al. . Genetic profile of 15 STR loci in the Min Nan population in Southeast China. Forensic Sci Int, 2005, 152(2): 263-265 PMID: 15978354

[9]

PhillipsCP, Syndercombe-CourtD, LareuMV, et al. . Band shift analysis of three base-pair repeat alleles in the short tandem repeat locus D12S391. Forensic Sci Int, 1998, 93(2): 79-88 PMID: 9717260

[10]

CrouseCA, RogersS, AmiottE, et al. . Analysis and interpretation of short tandem repeat microvariants and three-banded allele patterns using multiple allele detection systems. J Forensic Sci, 1999, 44: 87-94 PMID: 9987875

[11]

NeiM. Molecular evolutionary genetics, 1987, New York, Columbia University Press, 180

[12]

CobleMD, HillCR, ButlerJM. Haplotype data for 23 Y-chromosome markers in four U.S. population groups. Forensic Sci Int Genet, 2013, 7(3): e66-e68 PMID: 23578807

[13]

PurpsJ, SiegertS, WilluweitS, et al. . A global analysis of Y-chromosomal haplotype diversity for 23 STR loci. Forensic Sci Int Genet, 2014, 12: 12-23 PMCID: 4127773 PMID: 24854874

[14]

BärW, BrinkmannB, BudowleB, et al. . DNA recommendations. Further report of the DNA Commission of the ISFH regarding the use of short tandem repeat systems. International Society for Forensic Haemogenetics. Int J Legal Med, 1997, 110(4): 175-176

[15]

KovacevicL, Fatur-CericV, HadzicN, et al. . Haplotype data for 23 Y-chromosome markers in a reference sample from Bosnia and Herzegovina. Croat Med J, 2013, 54(3): 286-290 PMCID: 3692337 PMID: 23771760

[16]

HuSP, LiH, ZhangFH, et al. . Dominant contribution of northern Chinese to the paternal genetic structure of Chaoshanese in South China. Biochem Genet, 2011, 49(7–8): 483-498 PMID: 21360052

[17]

HammerMF, ChamberlainVF, KearneyVF, et al. . Population structure of Y chromosome SNP haplogroups in the United States and forensic implications for constructing Y chromosome STR databases. Forensic Sci Int, 2006, 164(1): 45-55 PMID: 16337103

AI Summary AI Mindmap
PDF

104

Accesses

0

Citation

Detail

Sections
Recommended

AI思维导图

/