Metabolic engineering of Corynebacterium glutamicum for L-alanine production
Yu Huang , Hedan Li , Guihong Zhao , Xiaoqing Hu , Xiaoyuan Wang
Systems Microbiology and Biomanufacturing ›› 2025, Vol. 5 ›› Issue (1) : 261 -275.
The production of L-alanine was enhanced in Corynebacterium glutamicum ATCC13869 through metabolic engineering of the biosynthesis pathways of L-alanine and fatty acids. Strains ΔfasB, ΔfasBR, ΔfasBΔpks13 and ΔfasBRΔpks13 were constructed and exhibited increased L-alanine yields up to 17.29 g/L. Different from ΔfasB mutant constructed from C. glutamicum ATCC13032 in which L-glutamate production accumulated, the muatnt ΔfasB constructed from C. glutamicum ATCC13869 in this study significantly produce L-alanine without L-glutamate accumulation. Transcriptional level analysis revealed that the knockout of fasB upregulated the expression levels of the genes related to L-alanine synthesis but downregulated those associated with fatty acid synthesis, confirming the redirection of metabolic flux from fatty acid synthesis to L-alanine synthesis in these strains. L-alanine productions were further enhanced in strains ΔfasB and ΔfasBR through the combinatorial expression of heterologous genes Bacillus subtilis alaD encoding alanine dehydrogenase and Escherichia coli alaE encoding alanine export protein, and the yields reached 55.21 g/L and 54.95 g/L, respectively. Finally, 69.9 g/L L-alanine was obtained in ΔfasB/pJYW-5-alaDE after 60 h of fermentation by supplementing glucose. Our data indicate that disrupting the fatty acid biosynthesis could redirect metabolic flux towards L-alanine biosynthesis. These results provide a new strategy for increasing the production of L-alanine in C. glutamicum.
Corynebacterium glutamicum / Fatty acid synthesis / FasI-B / L-alanine production / Acyl-CoA / AlaD
| [1] |
|
| [2] |
Lee M, Smith GM, Eiteman MA, Altman E. Aerobic production of alanine by Escherichia coli aceF ldhA mutants expressing the Bacillus sphaericus alaD gene. Applied microbiology and biotechnology. 2004. 65(1), 56–60. https://doi.org/10.1007/s00253-004-1560-3 |
| [3] |
Bretti C, Cigala RM, De Stefano C, Lando G, Sammartano S. Thermodynamic solution properties of a biodegradable chelant (MGDA) and its interaction with the major constituents of natural fluids. Fluid Phase Equilibria. 2017;43463–73. https://doi.org/10.1016/j.fluid.2016.11.027. |
| [4] |
|
| [5] |
|
| [6] |
|
| [7] |
|
| [8] |
|
| [9] |
|
| [10] |
Li H, Xu D, Tan X, Huang D, Huang Y, Zhao G, Hu X, Wang X. The role of trehalose biosynthesis on mycolate composition and L-glutamate production in Corynebacterium glutamicum. Microbiological research. 2023. 267, 127260. https://doi.org/10.1016/j.micres.2022.127260 |
| [11] |
|
| [12] |
Yang Y, Shi F, Tao G, Wang X. Purification and structure analysis of mycolic acids in Corynebacterium glutamicum. J Microbiol 50(2), 235–40. https://doi.org/10.1007/s12275-012-1459-0 |
| [13] |
Puech V, Chami M, Lemassu A, Lanéelle MA, Schiffler B, Gounon P, Bayan N, Benz R, Daffé M. Structure of the cell envelope of corynebacteria: importance of the non-covalently bound lipids in the formation of the cell wall permeability barrier and fracture plane. Microbiology 147(Pt 5), 1365–82. https://doi.org/10.1099/00221287-147-5-1365 |
| [14] |
|
| [15] |
Gago G, Diacovich L, Arabolaza A, Tsai SC, Gramajo H. Fatty acid biosynthesis in actinomycetes. FEMS Microbiol Rev 35(3), 475–97. https://doi.org/10.1111/j.1574-6976.2010.00259.x |
| [16] |
|
| [17] |
Zhang H, Li Y, Wang C, Wang X. Understanding the high L-valine production in Corynebacterium glutamicum VWB-1 using transcriptomics and proteomics. Sci Rep. 8(1), 3632. https://doi.org/10.1038/s41598-018-21926-5 |
| [18] |
Ikeda M, Takahashi K, Ohtake T, Imoto R, Kawakami H, Hayashi M, Takeno S. A futile metabolic cycle of fatty Acyl-CoA hydrolysis and resynthesis in Corynebacterium glutamicum and its disruption leading to fatty acid production. Appl Environ Microbiol. 87;5(e02469–20). https://doi.org/10.1128/AEM.02469-2. |
| [19] |
Nickel J, Irzik K, van Ooyen J, Eggeling L. The TetR-type transcriptional regulator FasR of Corynebacterium glutamicum controls genes of lipid synthesis during growth on acetate. Mol Microbiol. 78(1), 253–65. https://doi.org/10.1111/j.1365-2958.2010.07337.x |
| [20] |
Irzik K, van Ooyen J, Gätgens J, Krumbach K, Bott M, Eggeling L. Acyl-CoA sensing by FasR to adjust fatty acid synthesis in Corynebacterium glutamicum. J Biotechnol 192 Pt A, 96–101. https://doi.org/10.1016/j.jbiotec.2014.10.031 |
| [21] |
Galandrin S, Guillet V, Rane RS, Léger M, Eynard NR, Das N, Balganesh K, Mourey TS, Daffé L, Marrakchi M. H. Assay development for identifying inhibitors of the mycobacterial FadD32 activity. J BioMol Screen. 18(5), 576–87. https://doi.org/10.1177/1087057112474691 |
| [22] |
Portevin D, de Sousa-D’Auria C, Montrozier H, Houssin C, Stella A, Lanéelle MA, Bardou F, Guilhot C, Daffé M. The acyl-AMP ligase FadD32 and AccD4-containing acyl-CoA carboxylase are required for the synthesis of mycolic acids and essential for mycobacterial growth: identification of the carboxylation product and determination of the acyl-CoA carboxylase components. J Biol Chem. 280(10), 8862–74. https://doi.org/10.1074/jbc.M408578200 |
| [23] |
Gande R, Dover LG, Krumbach K, Besra GS, Sahm H, Oikawa T, Eggeling L. The two carboxylases of Corynebacterium glutamicum essential for fatty acid and mycolic acid synthesis. J Bacteriol, 189(14), 5257–64. https://doi.org/10.1128/JB.00254-07 |
| [24] |
Gande R, Gibson KJ, Brown AK, Krumbach K, Dover LG, Sahm H, Shioyama S, Oikawa T, Besra GS, Eggeling L. Acyl-CoA carboxylases (accD2 and accD3), together with a unique polyketide synthase (Cg-pks), are key to mycolic acid biosynthesis in Corynebacterianeae such as Corynebacterium glutamicum and Mycobacterium tuberculosis. J Biol Chem. 279(43), 44847–57. https://doi.org/10.1074/jbc.M408648200 |
| [25] |
Portevin D, De Sousa-D’Auria C, Houssin C, Grimaldi C, Chami M, Daffé M, Guilhot C. A polyketide synthase catalyzes the last condensation step of mycolic acid biosynthesis in mycobacteria and related organisms. Proc Natl Acad Sci USA. 101(1), 314–9. https://doi.org/10.1073/pnas.0305439101 |
| [26] |
Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res, 25(17), 3389–402. https://doi.org/10.1093/nar/25.17.3389 |
| [27] |
|
| [28] |
|
| [29] |
|
| [30] |
Smith GM, Lee SA, Reilly KC, Eiteman MA, Altman E. Fed-batch two-phase production of alanine by a metabolically engineered Escherichia coli. Biotechnol Lett. 28(20), 1695–700. https://doi.org/10.1007/s10529-006-9142-3 |
| [31] |
Zhang X, Jantama K, Moore JC, Shanmugam KT, Ingram LO. Production of L -alanine by metabolically engineered Escherichia coli. Appl Microbiol Biotechnol 77(2), 355–66. https://doi.org/10.1007/s00253-007-1170-y |
| [32] |
Ohnishi J, Ikeda M. Comparisons of potentials for L-lysine production among different Corynebacterium glutamicum strains. Bioscience, biotechnology, and biochemistry. 70(4), 1017–20. https://doi.org/10.1271/bbb.70.1017 |
| [33] |
Liebl W, Ehrmann M, Ludwig W, Schleifer KH. Transfer of Brevibacterium divaricatum DSM 20297T, Brevibacterium Flavum DSM 20411, Brevibacterium lactofermentum DSM 20412 and DSM 1412, and Corynebacterium glutamicum and their distinction by rRNA gene restriction patterns. Int J Syst Bacteriol 41(2), 255–60. https://doi.org/10.1099/00207713-41-2-255 |
| [34] |
Burkovski A. Cell envelope of corynebacteria: structure and influence on pathogenicity. ISRN Microbiol. 2013;935736. https://doi.org/10.1155/2013/935736. |
| [35] |
Nakayama Y, Hashimoto KI, Kawasaki H, Martinac B. Force-from-lipids mechanosensation in Corynebacterium glutamicum. Biophys Rev. 11(3), 327–33. https://doi.org/10.1007/s12551-019-00524-3 |
| [36] |
Nampoothiri KM, Hoischen C, Bathe B, Möckel B, Pfefferle W, Krumbach K, Sahm H, Eggeling L. Expression of genes of lipid synthesis and altered lipid composition modulates L-glutamate efflux of Corynebacterium glutamicum. Appl Microbiol Biotechnol 58(1), 89–96. https://doi.org/10.1007/s00253-001-0861-z |
| [37] |
Wada M, Narita K, Yokota A. Alanine production in an H+-ATPase- and lactate dehydrogenase-defective mutant of Escherichia coli expressing alanine dehydrogenase. Appl Microbiol Biotechnol 76(4), 819–25. https://doi.org/10.1007/s00253-007-1065-y |
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