Organic amendment effects on nematode distribution within aggregate fractions in agricultural soils

Xiaoke Zhang, Xia Wu, Shixiu Zhang, Yuehua Xing, Wenju Liang

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Soil Ecology Letters ›› 2019, Vol. 1 ›› Issue (3-4) : 147-156. DOI: 10.1007/s42832-019-0010-1
RESEARCH ARTICLE
RESEARCH ARTICLE

Organic amendment effects on nematode distribution within aggregate fractions in agricultural soils

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Abstract

To evaluate the effect of organic amendments on soil nematode community composition and diversity within aggregate fractions, a study was initiated in agricultural soils with four-year organic amendments. Soil samples were collected from the plow layer (0–20 cm) under three cornfield management scenarios: 1) conventional cropping (CK, corn straw removal and no organic manure application); 2) straw retention (SR, incorporation of chopped corn stalk); and 3) manure application (MA, chicken manure input). The soil samples were fractionated into four aggregate sizes, i.e.,>2 mm (large macroaggregates), 1–2 mm (macroaggregates), 0.25–1 mm (small macroaggregates), and<0.25 mm (microaggregates, silt and clay fractions). The composition and diversity of soil nematode communities were determined within each aggregate fraction. The results showed that both SR and MA treatments significantly increased the percentage of macroaggregates (>1 mm) and only MA treatment strongly increased the mean weight diameter compared to the CK (P<0.05). The abundance of total nematodes and four trophic groups were affected significantly by the aggregate fractions and their higher abundance occurred in the larger aggregates. The effects of aggregate size on most nematode genera were significant. Bacterivores in the small macroaggregates and microaggregates, and fungivores in the large macroaggregates were significantly different among treatments. The percentage of bacterivores increased after the application of organic materials, while that of fungivores decreased. It can be concluded that organic management significantly affects soil aggregation and soil characteristics within aggregates, and the aggregate size subsequently influences the distribution of nematode communities.

Keywords

Organic amendment / Soil aggregate fractions / Nematode communities / Macroaggregate / Microaggregate

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Xiaoke Zhang, Xia Wu, Shixiu Zhang, Yuehua Xing, Wenju Liang. Organic amendment effects on nematode distribution within aggregate fractions in agricultural soils. Soil Ecology Letters, 2019, 1(3-4): 147‒156 https://doi.org/10.1007/s42832-019-0010-1

References

[1]
Ahmad, R., Arshad, M., Khalid, A., Zahir, Z.A., 2008. Effectiveness of organic-/bio-fertilizer supplemented with chemical fertilizers for improving soil water retention, aggregate stability, growth and nutrient uptake of maize (Zea mays L.). Journal of Sustainable Agriculture 31, 57–77
CrossRef Google scholar
[2]
Biederman, L.A., Boutton, T.W., Whisenant, S.G., 2008. Nematode community development early in ecological restoration: The role of organic amendments. Soil Biology & Biochemistry 40, 2366–2374
CrossRef Google scholar
[3]
Bongers, T., Ferris, H., 1999. Nematode community structure as a bioindicator in environmental monitoring. Trends in Ecology & Evolution 14, 224–228
CrossRef Google scholar
[4]
Bonkowski, M., Villenave, C., Griffiths, B., 2009. Rhizosphere fauna: the functional and structural diversity of intimate interactions of soil fauna with plant roots. Plant and Soil 321, 213–233
CrossRef Google scholar
[5]
Briar, S.S., Fonte, S.J., Park, I., Six, J., Scow, K., Ferris, H., 2011a. The distribution of nematodes and soil microbial communities across soil aggregate fractions and farm management systems. Soil Biology & Biochemistry 43, 905–914
CrossRef Google scholar
[6]
Briar, S.S., Grewal, P.S., Somasekhar, N., Stinner, D., Miller, S.A., 2007. Soil nematode community, organic matter, microbial biomass and nitrogen dynamics in field plots transitioning from conventional to organic management. Applied Soil Ecology 37, 256–266
CrossRef Google scholar
[7]
Briar, S.S., Miller, S.A., Stinner, D., Kleinhenz, M.D., Grewal, P.S., 2011b. Effects of organic transition strategies for peri-urban vegetable production on soil properties, nematode community, and tomato yield. Applied Soil Ecology 47, 84–91
CrossRef Google scholar
[8]
Celik, I., Gunal, H., Budak, M., Akpinar, C., 2010. Effects of long-term organic and mineral fertilizers on bulk density and penetration resistance in semi-arid Mediterranean soil conditions. Geoderma 160, 236–243
CrossRef Google scholar
[9]
Cesarano, G., Filippis, F.D., Storia, A.L., Scala, F., Bonanomi, G., 2017. Organic amendment type and application frequency affect crop yields, soil fertility and microbiome composition. Applied Soil Ecology 120, 254–264
CrossRef Google scholar
[10]
Erum, Y.I., Shahina, F., 2010. Taxonomic studies on parasitic and soil nematodes found associated with wheat in Pakistan. Pakistan Journal of Nematology 28, 1–58.
[11]
Fabian, J., Zlatanovic, S., Mutz, M., Premke, K., 2017. Fungal–bacterial dynamics and their contribution to terrigenous carbon turnover in relation to organic matter quality. ISME Journal 11, 415–425
CrossRef Google scholar
[12]
Ferris, H., Bongers, T., 2006. Nematode indicators of organic enrichment. Journal of Nematology 38, 3–12.
[13]
Ferris, H., Bongers, T., de Goede, R.G.M., 2001. A framework for soil food web diagnostics: Extension of the nematode faunal analysis concept. Applied Soil Ecology 18, 13–29
CrossRef Google scholar
[14]
García-Álvarez, A., Arias, M., Díez-Rojo, M.A., Bello, A., 2004. Effect of agricultural management on soil nematode trophic structure in a Mediterranean cereal system. Applied Soil Ecology 27, 197–210
CrossRef Google scholar
[15]
Gartzia-Bengoetxea, N., González-Arias, A., Merino, A., Martínez de Arano, I., 2009. Soil organic matter in soil physical fractions in adjacent semi-natural and cultivated stands in temperate Atlantic forests. Soil Biology & Biochemistry 41, 1674–1683
CrossRef Google scholar
[16]
Griffiths, B.S., Ball, B.C., Daniell, T.J., Hallett, P.D., Neilson, R., Wheatley, R.E., Osler, G., Bohanec, M., 2010. Integrating soil quality changes to arable agricultural systems following organic matter addition, or adoption of a ley-arable rotation. Applied Soil Ecology 46, 43–53
CrossRef Google scholar
[17]
Hlava, J., Száková, J., Vadlejch, J., Čadková, Z., Balík, J., Tlustoš, P., 2017. Long-term application of organic matter based fertilisers: Advantages or risks for soil biota? A review. Environmental Reviews 25, 408–414 doi:10.1139/er-2017-0011.
[18]
IUSS working group W.R.B., 2014. World reference base for soil resources 2014, International soil classification system for naming soils and creating legends for soil maps. World Soil Resources Reports No. 106, FAO, Rome.
[19]
Jiang, Y.J., Liu, M.Q., Zhang, J.B., Chen, Y., Chen, X.Y., Chen, L.J., Li, H.X., Zhang, X.X., Sun, B., 2017. Nematode grazing promotes bacterial community dynamics in soil at the aggregate level. ISME Journal 11, 2705–2717
CrossRef Google scholar
[20]
Jiang, Y.J., Qian, H.Y., Wang, X.Y., Chen, L.J., Liu, M.Q., Li, H.X., Sun, B., 2018. Nematodes and microbial community affect the sizes and turnover rates of organic carbon pools in soil aggregates Soil Biology and Biochemistry 119, 22–31
CrossRef Google scholar
[21]
Jiang, Y.J., Sun, B., Jin, C., Wang, F., 2013. Soil aggregate stratification of nematodes and microbial communities affects the metabolic quotient in an acid soil. Soil Biology & Biochemistry 60, 1–9
CrossRef Google scholar
[22]
Kushwaha, C.P., Tripathi, S.K., Singh, K.P., 2001. Soil organic matter and water-stable aggregates under different tillage and residue conditions in a tropical dryland agroecosystem. Applied Soil Ecology 16, 229–241
CrossRef Google scholar
[23]
Lebron, I., Suarez, D.L., Schaap, M.G., 2002. Soil pore size and geometry as a result of aggregate-size distribution and chemical composition. Soil Science 167, 165–172
CrossRef Google scholar
[24]
Li, F.Q., Xue, C., Qiu, P.F., Liu, Y.X., Shi, J.X., Shen, B., Yang, X.M., Shen, Q.R., 2018. Soil aggregate size mediates the responses of microbial communities to crop rotation. European Journal of Soil Biology 88, 48–56
CrossRef Google scholar
[25]
Liang, A.Z., Zhang, Y., Zhang, X.P., Yang, X.M., McLaughlin, N., Chen, X.W., Guo, Y.F., Jia, S.X., Zhang, S.X., Wang, L.X., Tang, J.W., 2019. Investigations of relationships among aggregate pore structure, microbial biomass, and soil organic carbon in a Mollisol using combined nondestructive measurements and phospholipid fatty acid analysis. Soil & Tillage Research 185, 94–101
CrossRef Google scholar
[26]
Liang, W.J., Wu, X., Zhang, S.X., Xing, Y.H., Wang, R., 2011. Effect of organic amendments on soil water storage in the aeolian sandy land of Northeast China. 2011 International Conference on Electrical and Control Engineering1538–1540.
[27]
Mummey, D., Holben, W., Six, J., Stahl, P., 2006. Spatial stratification of soil bacterial populations in aggregates of diverse soils. Microbial Ecology 51, 404–411
CrossRef Google scholar
[28]
Nahar, M.S., Grewal, P.S., Miller, S.A., Stinner, D., Stinner, B.R., Kleinhenz, M.D., Wszelaki, A., Doohan, D., 2006. Differential effects of raw and composted manure on nematode community, and its indicative value for soil microbial, physical and chemical properties. Applied Soil Ecology 34, 140–151
CrossRef Google scholar
[29]
Neher, D.A., 2010. Ecology of plant and free-living nematodes in natural and agricultural soil. Annual Review of Phytopathology 48, 371–394
CrossRef Google scholar
[30]
Nielsen, U.N., Osler, G.H.R., Campbell, C.D., Neilson, R., Burslem, D.F.R.P., van der Wal, R., 2010. The enigma of soil animal species diversity revisited: The role of small-scale heterogeneity. PLoS One 5, e11567
CrossRef Google scholar
[31]
Okada, H., Harada, H., 2007. Effects of tillage and fertilizer on nematode communities in a Japanese soybean field. Applied Soil Ecology 35, 582–598
CrossRef Google scholar
[32]
Okada, H., Harada, H., Kadota, I., 2005. Fungal feeding habits of six nematode isolates in the genus. Soil Biology & Biochemistry 37, 1113–1120
CrossRef Google scholar
[33]
Ruess, L., Ferris, H., 2004. Decomposition pathways and successional changes. Proceedings of the 4th International Congress of Nematology, In: Cook, R.C., Hunt, D.J. (Eds) Nematology Monographs and Perspectives, Brill, Leiden, Netherlands, 1–10.
[34]
Sarker, T.C., Incerti, G., Spaccini, R., Piccolo, A., Mazzoleni, S., Bonanomi, G., 2018. linking organic matter chemistry with soil aggregate stability: Insight from 13C NMR spectroscopy. Soil Biology & Biochemistry 117, 175–184
CrossRef Google scholar
[35]
Schutter, M.E., Dick, R.P., 2002. Microbial community profiles and activities among aggregates of winter 24 fallow and cover-cropped soil. Soil Science Society of America Journal 66, 142–153
CrossRef Google scholar
[36]
Sun, F., Pan, K.W., Li, Z.L., Wang, S.Z., Tariq, A., Olatunji, O.A., Sun, X.M., Zhang, L., Shi, W.Y., Wu, X.G., 2018. Soybean supplementation increases the resilience of microbial and nematode communities in soil to extreme rainfall in an agroforestry system. Science of the Total Environment 626, 776–784
CrossRef Google scholar
[37]
Thakur, M.P., Reich, P.B., Fisichelli, N.A., Stefanski, A., Cesarz, S., Dobies, T., Rich, R.L., Hobbie, S.E., Eisenhauer, N., 2014. Nematode community shifts in response to experimental warming and canopy conditions are associated with plant community changes in the temperate-boreal forest ecotone. Oecologia 175, 713–723
CrossRef Google scholar
[38]
Van Bavel, C.H.M., 1950. Mean weight-diameter of soil aggregates as a statistical index of aggregation. Soil Sci. Soc. Am. Proc. 14, 20–23
CrossRef Google scholar
[39]
Verschoor, B.C., De Goede, R.G.M., 2000. The nematode extraction efficiency of the Oostenbrink elutriator-cottonwool filter method with special reference to nematode body size and life strategy. Nematol. 2, 325–342
CrossRef Google scholar
[40]
Wang, S.Q., Li, T.X., Zhen, Z.C., 2018. Response of soil aggregate-associated microbial and nematode communities to tea plantation age. Catena 171, 475–484
CrossRef Google scholar
[41]
Yeates, G.W., 2003. Nematodes as soil indicators: functional and biodiversity aspects. Biology and Fertility of Soils 37, 199–210.
[42]
Yeates, G.W., Bongers, T., de Goede, R.G.M., Freckman, D.W., Georgieva, S.S., 1993. Feeding habits in soil nematode families and genera – an outline for soil ecologists. Journal of Nematology 25, 315–331.
[43]
Zhang, S.X., Li, Q., Lv, Y., Zhang, X.P., Liang, W.J., 2013a. Contributions of soil biota to C sequestration varied with aggregate fractions under different tillage systems. Soil Biology & Biochemistry 62, 147–156
CrossRef Google scholar
[44]
Zhang, S.X., Li, Q., Zhang, X.P., Wei, K., Chen, L.J., Liang, W.J., 2012a. Effects of conservation tillage on soil aggregation and aggregate binding agents in black soil of Northeast China. Soil & Tillage Research 124, 196–202
CrossRef Google scholar
[45]
Zhang, X.K., Li, Q., Zhu, A.N., Liang, W.J., Zhang, J.B., Steinberger, Y., 2012b. Effects of tillage and residue management on soil nematode communities in North China. Ecological Indicators 13, 75–81
CrossRef Google scholar
[46]
Zhang, X.K., Liang, W.J., Li, Q., 2013b. Forest soil nematodes in Changbai Mountain-Morphology and distribution. Beijing, China Agricultural Press. pp. 1–174.
[47]
Zhang, X.K., Wu, X., Zhang, S.X., Xing, Y.H., Wang, R., Liang, W.J., 2014. Organic amendment effects on aggregate-associated organic C, microbial biomass C and glomalin in agricultural soils. Catena 123, 188–194
CrossRef Google scholar
[48]
Zhang, Z.Y., Zhang, X.K., Mahamood, M., Zhang, S.Q., Huang, S.M., Liang, W.J., 2016a. Effect of long-term combined application of organic and inorganic fertilizers on soil nematode communities within aggregates. Scientific Reports 6, 31118
CrossRef Google scholar
[49]
Zhang, Z.Y., Zhang, X.K., Xu, M.G., Zhang, S.Q., Huang, S.M., Liang, W.J., 2016b. Responses of soil micro-food web to long-term fertilization in a wheat –maize rotation system. Applied Soil Ecology 98, 56–64
CrossRef Google scholar
[50]
Zhao, J., Shao, Y.H., Wang, X.L., Neher, D.A., Xu, G.L., Li, Z.A., Fu, S.L., 2013. Sentinel soil invertebrate taxa as bioindicators for forest management practices. Ecological Indicators 24, 236–239
CrossRef Google scholar
[51]
Zhao, J., Wan, S.Z., Zhang, C.L., Liu, Z.F., Zhou, L.X., Fu, S.L., 2014. Contributions of understory and/or overstory vegetations to soil microbial PLFA and nematode diversities in Eucalyptus monocultures. PLoS One 9, e85513
CrossRef Google scholar
[52]
Zheng, B., Marschner, P., 2017. Residue addition frequency influences respiration, microbial biomass and nutrient availability in soil amended with high and low C/N residue. Journal of Soil Science and Plant Nutrition 17, 1–13
CrossRef Google scholar

Acknowledgments

This research was supported by the National Key Research & Development Plan of China (No. 2016YFD0300204).

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