Protocol for simulating the effect of THz electromagnetic field on ion channels

Lingfeng Xue, Zigang Song, Qi Ouyang, Chen Song

Quant. Biol. ›› 2025, Vol. 13 ›› Issue (3) : e94.

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Quant. Biol. ›› 2025, Vol. 13 ›› Issue (3) : e94. DOI: 10.1002/qub2.94

Protocol for simulating the effect of THz electromagnetic field on ion channels

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Abstract

Terahertz (THz) electromagnetic fields are increasingly recognized for their crucial roles in various aspects of medical research and treatment. Recent computational studies have demonstrated that THz waves can modulate ion channel function by interacting with either the channel proteins or the bound ions through distinct mechanisms. Here, we outline a universal simulation protocol to identify the THz frequencies that may affect ion channels, which consists of frequency spectrum analysis and ion conductance analysis. Following this protocol, we studied the effect of the THz field on a CaV channel and found a broad frequency band in the 1-20 THz range. We believe that this protocol, along with the identified characteristic frequencies, will provide a theoretical foundation for future terahertz experimental studies.

Keywords

calcium channel / frequency spectrum / ion channel / terahertz

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Lingfeng Xue, Zigang Song, Qi Ouyang, Chen Song. Protocol for simulating the effect of THz electromagnetic field on ion channels. Quant. Biol., 2025, 13(3): e94 https://doi.org/10.1002/qub2.94
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References

[1]
Amini T , Jahangiri F , Ameri Z , Hemmatian MA . A review of feasible applications of THz waves in medical diagnostics and treatments. J Laser Med Sci. 2021; 12 (1): e92.
CrossRef Google scholar
[2]
Fitzgerald AJ , Wallace VP , Jimenez-Linan M , Bobrow L , Pye RJ , Purushotham AD , et al. Terahertz pulsed imaging of human breast tumors. Radiology. 2006; 239 (2): 533- 40.
CrossRef Google scholar
[3]
Woodward RM , Cole BE , Wallace VP , Pye RJ , Arnone DD , Linfield EH , et al. Terahertz pulse imaging in reflection geometry of human skin cancer and skin tissue. Phys Med Biol. 2002; 47 (21): 3853- 63.
CrossRef Google scholar
[4]
Shi S , Yuan S , Zhou J , Jiang P . Terahertz technology and its applications in head and neck diseases. iScience. 2023; 26 (7): 107060.
CrossRef Google scholar
[5]
Olshevskaya J , Ratushnyak A , Petrov A , Kozlov A , Zapara T . Effect of terahertz electromagnetic waves on neurons systems. In: 2008 IEEE region 8 international conference on computational technologies in electrical and electronics engineering. IEEE; 2008. pp. 210- 1.
CrossRef Google scholar
[6]
Khamoyan AG , Shevela EY , Chernykh ER . Investigation of possibility of submillimeter laser using as instrument for diagnostics in medicine. In: International conference on lasers, applications, and technologies 2007: laser technologies for medicine. SPIE; 2007, pp. 11- 7.
[7]
Bock J , Fukuyo Y , Kang S , Phipps ML , Alexandrov LB , Rasmussen KØ , et al. Mammalian stem cells reprogramming in response to terahertz radiation. PLoS One. 2010; 5 (12): e15806.
CrossRef Google scholar
[8]
Titova LV , Ayesheshim AK , Golubov A , Fogen D , Rodriguez-Juarez R , Hegmann FA , et al. Intense THz pulses cause H2AX phosphorylation and activate DNA damage response in human skin tissue. Biomed Opt Express. 2013; 4 (4): 559- 68.
CrossRef Google scholar
[9]
Alexandrov BS , Gelev V , Bishop AR , Usheva A , Rasmussen KØ . DNA breathing dynamics in the presence of a terahertz field. Phys Lett A. 2010; 374 (10): 1214- 7.
CrossRef Google scholar
[10]
Tang J , Yin H , Ma J , Bo W , Yang Y , Xu J , et al. Terahertz electric field-induced membrane electroporation by molecular dynamics simulations. J Membr Biol. 2018; 251 (5-6): 681- 93.
CrossRef Google scholar
[11]
Conti Nibali V , Sacchetti F , Paciaroni A , Petrillo C , Tarek M , D’angelo G . Intra-protein interacting collective modes in the terahertz frequency region. J Chem Phys. 2023; 159 (16).
CrossRef Google scholar
[12]
Wu K , Qi C , Zhu Z , Wang C , Song B , Chang C . Terahertz wave accelerates DNA unwinding: a molecular dynamics simulation study. J Phys Chem Lett. 2020; 11 (17): 7002- 8.
CrossRef Google scholar
[13]
Zhang Q , Yang L , Wang K , Guo L , Ning H , Wang S , et al. Terahertz waves regulate the mechanical unfolding of tau pre-mrna hairpins. iScience. 2023; 26 (9): 107572.
CrossRef Google scholar
[14]
Liu X , Qiao Z , Chai Y , Zhu Z , Wu K , Ji W , et al. Nonthermal and reversible control of neuronal signaling and behavior by midinfrared stimulation. Proc Natl Acad Sci USA. 2021; 118 (10): e2015685118.
CrossRef Google scholar
[15]
Wang Y , Wang H , Ding W , Zhao X , Li Y , Liu C . Regulation of ion permeation of the KcsA channel by applied midinfrared field. Int J Mol Sci. 2022; 24 (1): 556.
CrossRef Google scholar
[16]
Li Y , Chang C , Zhu Z , Sun L , Fan C . Terahertz wave enhances permeability of the voltage-gated calcium channel. J Am Chem Soc. 2021; 143 (11): 4311- 8.
CrossRef Google scholar
[17]
Song Z , Xue L , Ouyang Q , Song C . The effect of THz electromagnetic field on the conductance of potassium and sodium channels. Nat Methods. 2024. Preprint at bioRxiv:2024.08.27.609902.
CrossRef Google scholar
[18]
Jo S , Kim T , Iyer VG , Im W . CHARMM-GUI: a web-based graphical user interface for CHARMM. J Comput Chem. 2008; 29 (11): 1859- 65.
CrossRef Google scholar
[19]
Yao X , Gao S , Yan N . Structural basis for pore blockade of human voltage-gated calcium channel Cav1.3 by motion sickness drug cinnarizine. Cell Res. 2022; 32 (10): 946- 8.
CrossRef Google scholar
[20]
Zhang A , Yu H , Liu C , Song C . The Ca2+ permeation mechanism of the ryanodine receptor revealed by a multi-site ion model. Nat Commun. 2020; 11 (1): 922.
CrossRef Google scholar

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2025 The Author(s). Quantitative Biology published by John Wiley & Sons Australia, Ltd on behalf of Higher Education Press.
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