Protein & Cell >

2015 , Vol. 6 >Issue 3: 221 - 224

DOI: https://doi.org/10.1007/s13238-014-0114-4

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I-GSEA4GWAS v2: a web server for functional analysis of SNPs in trait-associated pathways identified from genome-wide association study

  • Kunlin Zhang ,
  • Suhua Chang ,
  • Liyuan Guo ,
  • Jing Wang
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  • Key Laboratory of Mental Health, Institute of Psychology, Chinese Academy of Sciences, Beijing 100101, China

Published date: 01 Apr 2015

Copyright

2014 This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
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Kunlin Zhang , Suhua Chang , Liyuan Guo , Jing Wang . I-GSEA4GWAS v2: a web server for functional analysis of SNPs in trait-associated pathways identified from genome-wide association study[J]. Protein & Cell, 2015 , 6(3) : 221 -224 . DOI: 10.1007/s13238-014-0114-4

References

Publishing order | Descend order by publishing year | Descend order by cited within
1
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT (2000) Gene ontology: tool for the uniflcation of biology. The Gene Ontology Consortium. Nat Genet25: 25-29

DOI

2
Bernstein BE, Birney E, Dunham I, Green ED, Gunter C, Snyder M (2012) An integrated encyclopedia of DNA elements in the human genome. Nature489: 57-74

DOI

3
Cookson W, Liang L, Abecasis G, Moffatt M, Lathrop M (2009) Mapping complex disease traits with global gene expression. Nat Rev Genet10: 184-194

DOI

4
Craddock RM, Lockstone HE, Rider DA, Wayland MT, Harris LJ, McKenna PJ, Bahn S (2007) Altered T-cell function in schizophrenia: a cellular model to investigate molecular disease mechanisms. PLoS One2: e692

DOI

5
Dozmorov MG, Cara LR, Giles CB, Wren JD (2012) GenomeRunner: automating genome exploration. Bioinformatics28: 419-420

DOI

6
Flicek P, Amode MR, Barrell D, Beal K, Billis K, Brent S, Carvalho-Silva D, Clapham P, Coates G, Fitzgerald S (2014) Ensembl 2014. Nucleic Acids Res42: D749-D755

DOI

7
Kanehisa M, Goto S, Sato Y, Kawashima M, Furumichi M, Tanabe M (2014) Data, information, knowledge and principle: back to metabolism in KEGG. Nucleic Acids Res42: D199-D205

DOI

8
McLean CY, Bristor D, Hiller M, Clarke SL, Schaar BT, Lowe CB, Wenger AM, Bejerano G (2010) GREAT improves functional interpretation of cis-regulatory regions. Nat Biotechnol28: 495-501

DOI

9
Need AC, Ge D, Weale ME, Maia J, Feng S, Heinzen EL, Shianna KV, Yoon W, Kasperaviciute D, Gennarelli M (2009) A genome-wide investigation of SNPs and CNVs in schizophrenia. PLos Genet5: e1000373

DOI

10
Ripke S, O’Dushlaine C, Chambert K, Moran JL, Kahler AK, Akterin S, Bergen SE, Collins AL, Crowley JJ, Fromer M (2013) Genome-wide association analysis identifles 13 new risk loci for schizophrenia. Nat Genet45: 1150-1159

DOI

11
Wang K, Li M, Bucan M (2007) Pathway-based approaches for analysis of genomewide association studies. Am J Hum Genet81: 1278-1283

DOI

12
Wang K, Li M, Hakonarson H (2010) Analysing biological pathways in genome-wide association studies. Nat Rev Genet11: 843-854

DOI

13
Zhang K, Cui S, Chang S, Zhang L, Wang J (2010) i-GSEA4GWAS: a web server for identiflcation of pathways/gene sets associated with traits by applying an improved gene set enrichment analysis to genome-wide association study. Nucleic Acids Res38: W90-W95

DOI

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