I-GSEA4GWAS v2: a web server for functional analysis of SNPs in trait-associated pathways identified from genome-wide association study
Kunlin Zhang, Suhua Chang, Liyuan Guo, Jing Wang
I-GSEA4GWAS v2: a web server for functional analysis of SNPs in trait-associated pathways identified from genome-wide association study
[1] |
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT
CrossRef
Google scholar
|
[2] |
Bernstein BE, Birney E, Dunham I, Green ED, Gunter C, Snyder M (2012) An integrated encyclopedia of DNA elements in the human genome. Nature489: 57-74
CrossRef
Google scholar
|
[3] |
Cookson W, Liang L, Abecasis G, Moffatt M, Lathrop M (2009) Mapping complex disease traits with global gene expression. Nat Rev Genet10: 184-194
CrossRef
Google scholar
|
[4] |
Craddock RM, Lockstone HE, Rider DA, Wayland MT, Harris LJ, McKenna PJ, Bahn S (2007) Altered T-cell function in schizophrenia: a cellular model to investigate molecular disease mechanisms. PLoS One2: e692
CrossRef
Google scholar
|
[5] |
Dozmorov MG, Cara LR, Giles CB, Wren JD (2012) GenomeRunner: automating genome exploration. Bioinformatics28: 419-420
CrossRef
Google scholar
|
[6] |
Flicek P, Amode MR, Barrell D, Beal K, Billis K, Brent S, Carvalho-Silva D, Clapham P, Coates G, Fitzgerald S
CrossRef
Google scholar
|
[7] |
Kanehisa M, Goto S, Sato Y, Kawashima M, Furumichi M, Tanabe M (2014) Data, information, knowledge and principle: back to metabolism in KEGG. Nucleic Acids Res42: D199-D205
CrossRef
Google scholar
|
[8] |
McLean CY, Bristor D, Hiller M, Clarke SL, Schaar BT, Lowe CB, Wenger AM, Bejerano G (2010) GREAT improves functional interpretation of cis-regulatory regions. Nat Biotechnol28: 495-501
CrossRef
Google scholar
|
[9] |
Need AC, Ge D, Weale ME, Maia J, Feng S, Heinzen EL, Shianna KV, Yoon W, Kasperaviciute D, Gennarelli M
CrossRef
Google scholar
|
[10] |
Ripke S, O’Dushlaine C, Chambert K, Moran JL, Kahler AK, Akterin S, Bergen SE, Collins AL, Crowley JJ, Fromer M
CrossRef
Google scholar
|
[11] |
Wang K, Li M, Bucan M (2007) Pathway-based approaches for analysis of genomewide association studies. Am J Hum Genet81: 1278-1283
CrossRef
Google scholar
|
[12] |
Wang K, Li M, Hakonarson H (2010) Analysing biological pathways in genome-wide association studies. Nat Rev Genet11: 843-854
CrossRef
Google scholar
|
[13] |
Zhang K, Cui S, Chang S, Zhang L, Wang J (2010) i-GSEA4GWAS: a web server for identiflcation of pathways/gene sets associated with traits by applying an improved gene set enrichment analysis to genome-wide association study. Nucleic Acids Res38: W90-W95
CrossRef
Google scholar
|
/
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