Distance measurement between two flexible sites in proteins in high viscosity medium at physiological temperature using continuous wave EPR
Lu Yu, Wei Wang, Shenglong Ling, Yao He, Liang Xiao, Kaiqi Wu, Longhua Zhang, Changlin Tian
Distance measurement between two flexible sites in proteins in high viscosity medium at physiological temperature using continuous wave EPR
[1] |
Altenbach C, Oh KJ, Trabanino RJ, Hideg K, Hubbell WL (2001) Estimation of inter-residue distances in spin labeled proteins at physiological temperatures: experimental strategies and practical limitations. Biochemistry40: 15471-15482
CrossRef
Google scholar
|
[2] |
Banham JE, Baker CM, Ceola S, Day IJ, Grant GH, Groenen EJ, Rodgers CT, Jeschke G, Timmel CR (2008) Distance measurements in the borderline region of applicability of CW-EPR and DEER: a model study on a homologous series of spin-labelled peptides. J Magn Reson191: 202-218
CrossRef
Google scholar
|
[3] |
Essen LO, Siegert R, Lehmann WD, Oesterhelt D (1998) Lipid patches in membrane protein oligomers: crystal structure of the bacteriorhodopsin–lipid complex. Proc Natl Acad Sci USA95: 11673-11678
CrossRef
Google scholar
|
[4] |
Hellmich UA, Glaubitz C (2009) NMR and EPR studies of membrane transporters. Biol Chem390: 815-834
CrossRef
Google scholar
|
[5] |
Hustedt EJ, Beth AH (1999) Nitroxide spin–spin interactions: applications to protein structure and dynamics. Annu Rev Biophys Biomol Struct28: 129-153
CrossRef
Google scholar
|
[6] |
Lakshmi KV, Brudvig GW (2001) Pulsed electron paramagnetic resonance methods for macromolecular structure determination. Curr Opin Struct Biol11: 523-531
CrossRef
Google scholar
|
[7] |
Li J, Shi C, Gao Y, Wu K, Shi P, Lai C, Chen L, Wu F, Tian C (2012) Structural studies of Mycobacterium tuberculosis Rv0899 reveal a monomeric membrane-anchoring protein with two separate domains. J Mol Biol415: 382-392
CrossRef
Google scholar
|
[8] |
McHaourab HS, Lietzow MA, Hideg K, Hubbell WL (1996) Motion of spin-labeled side chains in T4 lysozyme. Correlation with protein structure and dynamics. Biochemistry35: 7692-7704
CrossRef
Google scholar
|
[9] |
Prevo B, Peterman EJ (2014) Forster resonance energy transfer and kinesin motor proteins. Chem Soc Rev43: 1144-1155
CrossRef
Google scholar
|
[10] |
Rabenstein MD, Shin YK (1995) Determination of the distance between two spin labels attached to a macromolecule. Proc Natl Acad Sci USA92: 8239-8243
CrossRef
Google scholar
|
[11] |
Sale K, Song L, Liu YS, Perozo E, Fajer P (2005) Explicit treatment of spin labels in modeling of distance constraints from dipolar EPR and DEER. J Am Chem Soc127: 9334-9335
CrossRef
Google scholar
|
[12] |
Sompornpisut P, Roux B, Perozo E (2008) Structural reflnement of membrane proteins by restrained molecular dynamics and solvent accessibility data. Biophys J95: 5349-5361
CrossRef
Google scholar
|
[13] |
Wu K, Shi C, Li J, Wang H, Shi P, Chen L, Wu F, Xiong Y, Tian C (2013) Efflcient long-distance NMR-PRE and EPR-DEER restraints for two-domain protein structure determination. Protein Cell4: 893-896
CrossRef
Google scholar
|
/
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