Mapping conformational IgE epitopes of arginine kinase in Oratosquilla oratoria

Fei Huan , Ye-Xin Chen , Shi-Qiang Yang , Shuai Gao , Yi Gu , Yi-Yu Chen , Meng Liu , Dong Lai , An-Feng Xiao , Guang-Ming Liu

Marine Life Science & Technology ›› : 1 -12.

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Marine Life Science & Technology ›› :1 -12. DOI: 10.1007/s42995-026-00396-z
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Mapping conformational IgE epitopes of arginine kinase in Oratosquilla oratoria
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Abstract

Arginine kinase (AK) is a major allergen found in Oratosquilla oratoria. However, the information about the formation of its conformational epitopes is limited. In this study, the three-dimensional structures of O. oratoria AK and eight conformational mimotopes were predicted using bioinformatic methods. All key amino acids of the predicted conformational mimotopes were individually deleted using site-directed mutagenesis, and changes in IgE-binding capacity were measured. Relative to native AK, the IgE-binding capacities of the three mutants were significantly reduced, confirming the presence of three conformational epitopes: O-AK-1, O-AK-2, and O-AK-3. Structural analyses indicated that the deletion of key residues induced subtle changes in secondary structure, surface hydrophobicity, and electrostatic potential, which may be responsible for localized structural distortions in the epitope regions. Furthermore, a comparison across shellfish species found that O-AK-1 and O-AK-2 were conserved within crustacean species and that O-AK-3 was conserved across crustaceans and mollusks. Overall, three conformational IgE epitopes were identified, and the deletion of key amino acids reduced IgE-binding capacity owing to localized structural alterations. The conserved epitopes suggest a potential molecular basis for cross-reactivity among shellfish. Collectively, these findings provide a foundation for epitope-based allergen-specific therapeutic strategies.

Keywords

Oratosquilla oratoria / Allergen / Arginine kinase / Conformational IgE epitope / Structure / Cross-reactivity

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Fei Huan, Ye-Xin Chen, Shi-Qiang Yang, Shuai Gao, Yi Gu, Yi-Yu Chen, Meng Liu, Dong Lai, An-Feng Xiao, Guang-Ming Liu. Mapping conformational IgE epitopes of arginine kinase in Oratosquilla oratoria. Marine Life Science & Technology 1-12 DOI:10.1007/s42995-026-00396-z

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References

[1]

Aalberse RC, Crameri R. IgE-binding epitopes: a reappraisal. Allergy, 2011, 66: 1261-1274

[2]

Bartha I, Almulhem N, Santos AF. Feast for thought: a comprehensive review of food allergy 2021–2023. J Allergy Clin Immunol, 2024, 153: 576-594

[3]

Brown CN, Vuong TT, Weigle AT, Chou Y, Rao Q, Ebmeier CC, Dupre RA, Boue SM, Smith B, Mattison CP. Phenylglyoxal-induced Ana o 3 modification reduces antibody binding with minimal alteration in protein structure. J Agric Food Chem, 2025, 73: 25043-25056

[4]

Burney P, Summers C, Chinn S, Hooper R, van Ree R, Lidholm J. Prevalence and distribution of sensitization to foods in the European Community Respiratory Health Survey: a EuroPrevall analysis. Allergy (Copenhagen), 2010, 65: 1182-1188

[5]

Chen XN, Dreskin SC. Application of phage peptide display technology for the study of food allergen epitopes. Mol Nutr Food Res, 2017, 61 1600568

[6]

Chen YX, He XR, Yang SQ, Huan F, Li DX, Yang Y, Chen GX, Liu GM. IgE epitope analysis and hypo-immunoreactivity derivative of arginine kinase in mantis shrimp (Oratosquilla oratoria). J Agric Food Chem, 2023, 71: 9508-9518

[7]

Cia G, Pucci F, Rooman M. Critical review of conformational B-cell epitope prediction methods. Brief Bioinform, 2023, 24 bbac567

[8]

Hakkaart GA, Aalberse RC, van Ree R. Epitope mapping of the house-dust-mite allergen Der p 2 by means of site-directed mutagenesis. Allergy, 1998, 53: 165-172

[9]

Han XY, Huan F, Yang SQ, He XR, Lai D, Liu QM, Tsui SK, Xiao AF, Rao ST, Liu G. Deciphering the cross-reactivity of tropomyosin across three molluscan species: insights into the role of conserved T-cell and B-cell epitopes. J Agric Food Chem, 2025, 73: 9370-9381

[10]

Heidari S, Ruethers T, Karnaneedi S, Yin LWS, Lopata AL. Advances in shellfish allergy therapy: from current approaches to future strategies. Clin Rev Allergy Immunol, 2025, 68: 65-65

[11]

Huan F, Han TJ, Liu M, Li MS, Yang Y, Liu QM, Lai D, Cao MJ, Liu GM. Identification and characterization of Crassostrea angulata arginine kinase, a novel allergen that causes cross-reactivity among shellfish. Food Funct, 2021, 12: 9866-9879

[12]

Huan F, Gao S, Han TJ, Liu M, Li MS, Yang Y, Chen YY, Lai D, Cao MJ, Liu GM. Identification of the immunoglobulin e epitope of arginine kinase, an important allergen from Crassostrea angulata. J Agric Food Chem, 2022, 70: 13419-13430

[13]

Huan F, Gao S, Gu Y, Ni LN, Wu M, Li Y, Liu M, Yang Y, Xiao A, Liu G. Molecular allergology: epitope discovery and its application for allergen-specific immunotherapy of food allergy. Clin Rev Allergy Immunol, 2025, 68: 37

[14]

Infante YC, Pupo A, Rojas G. A combinatorial mutagenesis approach for functional epitope mapping on phage-displayed target antigen. MAbs, 2014, 6: 637-648

[15]

Kamath SD, Bublin M, Kitamura K, Matsui T, Ito K, Lopata AL. Cross-reactive epitopes and their role in food allergy. J Allergy Clin Immunol, 2023, 151: 1178-1190

[16]

Khatri K, Richardson CM, Glesner J, Kapingidza AB, Mueller GA, Zhang J, Dolamore C, Vailes LD, Wünschmann S, Peebles RSJ, Chapman MD, Smith SA, Chruszcz M, Pomés A. Human IgE monoclonal antibody recognition of mite allergen Der p 2 defines structural basis of an epitope for IgE cross-linking and anaphylaxis in vivo. PNAS Nexus, 2022, 1 pgac054

[17]

Kulwanich B, Thanyaratsrisakul S, Jirapongsananuruk O, Hales BJ, Thomas WR, Piboonpocanun S. Effects of Ser47-point mutation on conformation structure and allergenicity of the allergen of Der p 2, a major house dust mite allergen. Allergy Asthma Clin Immunol, 2019, 11: 129

[18]

Li MS, Xia F, Liu QM, Li FJ, Liao YN, Zhong LQ, Chen GX, Luo LZ, Liu YX, Liu GM. Cross-reactivity and conserved epitope analysis of tropomyosin from Lateolabrax japonicus and shellfish species. Food Chem, 2025, 487 144755

[19]

Liu C, Sathe SK. Food allergen epitope mapping. J Agric Food Chem, 2018, 66: 7238-7248

[20]

Liu C, Li GQ, Chen Y, Lin H, Cao LM, Wang KQ, Wang XD, Flajnik MF, Sui JX. Insights into the recognition mechanism of shark-derived single-domain antibodies with high affinity and specificity targeting fluoroquinolones. Mar Life Sci Technol, 2025, 7: 340-351

[21]

Mirdita M, Schütze K, Moriwaki Y, Heo L, Ovchinnikov S, Steinegger M. ColabFold: making protein folding accessible to all. Nat Methods, 2022, 19: 679-682

[22]

Motoyama K, Suma Y, Ishizaki S, Nagashima Y, Lu Y, Ushio H, Shiomi K. Identification of tropomyosins as major allergens in Antarctic krill and mantis shrimp and their amino acid sequence characteristics. Mar Biotechnol, 2008, 10: 709-718

[23]

Negi SS, Braun W. Automated detection of conformational epitopes using phage display peptide sequences. Bioinform Biol Insights, 2009, 3: 71-81

[24]

Ni LN, Huan F, Gao S, Liu M, Wu MX, Gu Y, Lai D, Liu QM, Liu GM. Antigenic epitopes and cross-reactivity analysis of tropomyosin from Oratosquilla oratorio. Food Funct, 2024, 15: 12180-12192

[25]

Nugraha R, Kamath SD, Johnston E, Karnaneedi S, Ruethers T, Lopata AL. Conservation analysis of B-cell allergen epitopes to predict clinical cross-reactivity between shellfish and inhalant invertebrate allergens. Front Immunol, 2019, 10 2676

[26]

Pang SL, Ho KL, Waterman J, Rambo RP, Teh AH, Mathavan I, Harris G, Beis K, Say YH, Anusha MS, Sio YY, Chew FT, Ng CL. Crystal structure and epitope analysis of house dust mite allergen Der f 21. Sci Rep, 2019, 9 4933

[27]

Pavase TR, Lin H, Soomro MA, Zheng H, Li X, Wang K, Li Z. Visual detection of tropomyosin, a major shrimp allergenic protein using gold nanoparticles (AuNPs)-assisted colorimetric aptasensor. Mar Life Sci Technol, 2021, 3: 382-394

[28]

Pi XW, Fu GM, Dong B, Yang YL, Wan Y, Xie MY. Effects of fermentation with Bacillus natto on the allergenicity of peanut. LWT, 2021, 141 110862

[29]

Pi XW, Liu JF, Sun YX, Ban QF, Cheng JJ, Guo MR. Protein modification, IgE binding capacity, and functional properties of soybean protein upon conjugation with polyphenols. Food Chem, 2023, 405 134820

[30]

Ras-Carmona A, Lehmann AA, Lehmann PV, Reche PA. Prediction of B cell epitopes in proteins using a novel sequence similarity-based method. Sci Rep, 2022, 12 13739

[31]

Ruethers T, Taki AC, Johnston EB, Nugraha R, Le TTK, Kalic T, McLean TR, Kamath SD, Lopata AL. Seafood allergy: a comprehensive review of fish and shellfish allergens. Mol Immunol, 2018, 100: 28-57

[32]

Tscheppe A, Breiteneder H. Recombinant allergens in structural biology, diagnosis, and immunotherapy. Int Arch Allergy Immunol, 2017, 172: 187-202

[33]

Wai CYY, Leung NYH, Chu KH, Leung PSC, Leung ASY, Wong GWK, Leung TF. Overcoming shellfish allergy: how far have we come?. Int J Mol Sci, 2020, 21: 2234

[34]

Wai CYY, Leung NYH, Leung ASY, Wong GWK, Leung TF. Seafood allergy in Asia: geographical specificity and beyond. Front Allergy, 2021, 2 676903

[35]

WHO, FAO (2022) Risk assessment of food allergens. Part 1—review and validation of codex alimentarius priority allergen list through risk assessment. Food Saf Qual Ser

[36]

Xia L, Willison LN, Porter L, Robotham JM, Teuber SS, Sathe SK, Roux KH. Mapping of a conformational epitope on the cashew allergen Ana o2: a discontinuous large subunit epitope dependent upon homologous or heterologous small subunit association. Mol Immunol, 2010, 47: 1808-1816

[37]

Yang Y, Cao MJ, Alcocer M, Liu QM, Fei DX, Mao HY, Liu GM. Mapping and characterization of antigenic epitopes of arginine kinase of Scylla paramamosain. Mol Immunol, 2015, 65: 310-320

[38]

Yang Y, Hu MJ, Jin TC, Zhang YX, Liu GY, Li YB, Zhang ML, Cao MJ, Su WJ, Liu GM. A comprehensive analysis of the allergenicity and IgE epitopes of myosinogen allergens in Scylla paramamosain. Clin Exp Allergy, 2019, 49: 108-119

[39]

Yang Y, Liu GY, Yang H, Hu MJ, Cao MJ, Su WJ, Jin T, Liu GM. Crystal structure determination of Scylla paramamosain arginine kinase, an allergen that may cause cross-reactivity among invertebrates. Food Chem, 2019, 271: 597-605

[40]

Yang YS, Xu ZQ, Zhu W, Zhu DX, Jiao YX, Zhang LS, Hou YB, Wei JF, Sun JL. Molecular and immunochemical characterization of profilin as major allergen from Platanus acerifolia pollen. Int Immunopharmacol, 2022, 106 108601

[41]

Yang Y, He XR, He SY, Lin JJ, Li FJ, Chen JL, Gu SN, Jin T, Chen GX, Liu GM. Screening and interaction analysis of shark-derived nanobodies against crayfish major allergen Pro c 2. J Agr Food Chem, 2025, 73: 10589-10602

[42]

Yu N, Qin YF, Kang WH, Zhang JK, Wang HT, Wang XY, Chen Y. Molecular characterization, B-cell linear epitopes identification and key amino acids selection of the sesame allergen Ses i 5. Int J Biol Macromol, 2025, 303 140635

[43]

Zhang AL, Zhao HJ, Pei SH, Chi Y, Fan XH, Liu JQ. Identification and structure of epitopes on cashew allergens Ana o 2 and Ana o 3 using phage display. Molecules, 2023, 28 1880

[44]

Zhang ZY, Li XM, Wang H, Lin H, Xiao H, Li ZX. Seafood allergy: allergen, epitope mapping and immunotherapy strategy. Crit Rev Food Sci Nutr, 2023, 63: 1314-1338

[45]

Zhou XY, Ren LM, Zhang Y, Zhang J, Li X, Yang AS, Tong P, Wu ZH, Chen HB. Effect of structural targeted modifications on the potential allergenicity of peanut allergen Ara h 2. J Agric Food Chem, 2023, 71: 836-845

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