Association of PTPRC gene polymorphisms with TNF inhibitor efficacy in rheumatoid arthritis: a systematic review and meta-analysis

João Locke Ferreira de Araújo , Ingrid Marins de Almeida , Suanne Burgos Azevedo , Lilian de Sá Garcia Landeiro , Ryan dos Santos Costa

Journal of Translational Genetics and Genomics ›› 2025, Vol. 9 ›› Issue (4) : 304 -13.

PDF
Journal of Translational Genetics and Genomics ›› 2025, Vol. 9 ›› Issue (4) :304 -13. DOI: 10.20517/jtgg.2025.70
review-article

Association of PTPRC gene polymorphisms with TNF inhibitor efficacy in rheumatoid arthritis: a systematic review and meta-analysis

Author information +
History +
PDF

Abstract

Background: Rheumatoid arthritis (RA) is a chronic autoimmune inflammatory disease characterized by joint destruction and functional impairment. Tumor Necrosis Factor inhibitors (TNFi) are widely used biologic therapies for RA; however, patient outcomes show significant individual variation. Genetic factors, including polymorphisms in the PTPRC gene, have been investigated as potential predictors of TNFi efficacy, but results remain inconsistent.

Methods: We conducted a systematic review and meta-analysis following PRISMA guidelines to evaluate the association between PTPRC polymorphisms and TNFi treatment response in RA patients. A comprehensive search was performed in PubMed and Scopus databases up to April 2025. Studies were screened and quality assessed using the Q-Genie tool. Meta-analyses employed Mantel-Haenszel methods with fixed and random effects models.

Results: Five studies met eligibility criteria, including data from 12 European cohorts totaling 1,543 RA patients. The main polymorphism assessed was rs10919563. Meta-analysis revealed the rs10919563 A allele was significantly associated with increased odds of non-response to TNFi (allelic model OR: 1.94; 95%CI: 1.31-2.88). The recessive models supported these findings, and no publication bias was detected.

Conclusions: Our results consolidate evidence supporting the PTPRC rs10919563 polymorphism as a potential predictive genetic biomarker for TNFi efficacy in RA, which could be integrated into personalized treatment strategies. Further studies are required to validate clinical utility across diverse populations.

Keywords

Rheumatoid arthritis / PTPRC gene / tumor necrosis factor inhibitors (TNFi) / genetic polymorphisms / treatment response biomarkers

Cite this article

Download citation ▾
João Locke Ferreira de Araújo, Ingrid Marins de Almeida, Suanne Burgos Azevedo, Lilian de Sá Garcia Landeiro, Ryan dos Santos Costa. Association of PTPRC gene polymorphisms with TNF inhibitor efficacy in rheumatoid arthritis: a systematic review and meta-analysis. Journal of Translational Genetics and Genomics, 2025, 9(4): 304-13 DOI:10.20517/jtgg.2025.70

登录浏览全文

4963

注册一个新账户 忘记密码

References

[1]

SmolenJS,McInnesIB.Rheumatoid arthritis.Lancet2016;388:2023-38

[2]

LinYJ,SchülkeS.Update on the pathomechanism, diagnosis, and treatment options for rheumatoid arthritis.Cells2020;9:880 PMCID:PMC7226834

[3]

CaporaliR,HowellO.A real-world comparison of clinical effectiveness in patients with rheumatoid arthritis treated with upadacitinib, tumor necrosis factor inhibitors, and other advanced therapies after switching from an initial tumor necrosis factor inhibitor.Adv Ther2024;41:3706-21 PMCID:PMC11349780

[4]

MohammadiP,ChalabiM,KhademiF.An overview of immune checkpoint therapy in autoimmune diseases.Int Immunopharmacol2022;107:108647

[5]

AkiyamaM.Pathogenesis, clinical features, and treatment strategy for rheumatoid arthritis-associated interstitial lung disease.Autoimmun Rev2022;21:103056

[6]

ScottIC,WalkerJ.Do genetic susceptibility variants associate with disease severity in early active rheumatoid arthritis?.J Rheumatol2015;42:1131-40 PMCID:PMC6714044

[7]

RaychaudhuriS,RemmersEF.Genetic variants at CD28, PRDM1 and CD2/CD58 are associated with rheumatoid arthritis risk.Nat Genet2009;41:1313-8 PMCID:PMC3142887

[8]

BartonA,KeX.Re-evaluation of putative rheumatoid arthritis susceptibility genes in the post-genome wide association study era and hypothesis of a key pathway underlying susceptibility.Hum Mol Genet2008;17:2274-9 PMCID:PMC2465799

[9]

OrozcoG.Identification of new susceptibility markers for rheumatoid arthritis and systemic lupus erythematosus in the STAT4 gene.Per Med2008;5:169-74

[10]

MohrenL,MiroschnikovN,BuschMA.Role of protein tyrosine phosphatase receptor type E (PTPRE) in chemoresistant retinoblastoma.Int J Mol Sci2024;25:4572 PMCID:PMC11049872

[11]

LippertAH,GaglioniM.Antibody agonists trigger immune receptor signaling through local exclusion of receptor-type protein tyrosine phosphatases.Immunity2024;57:256-70.e10

[12]

BekS,NielsenJV.Systematic review and meta-analysis: pharmacogenetics of anti-TNF treatment response in rheumatoid arthritis.Pharmacogenomics J2017;17:403-11 PMCID:PMC5637244

[13]

PrasadP,GuptaR,ThelmaBK.Caucasian and Asian specific rheumatoid arthritis risk loci reveal limited replication and apparent allelic heterogeneity in north Indians.PLoS One2012;7:e31584 PMCID:PMC3280307

[14]

RaychaudhuriS,LeeAT.Common variants at CD40 and other loci confer risk of rheumatoid arthritis.Nat Genet2008;40:1216-23 PMCID:PMC2757650

[15]

Ferreiro-IglesiasA,Perez-PampinE.Replication of PTPRC as genetic biomarker of response to TNF inhibitors in patients with rheumatoid arthritis.Pharmacogenomics J2016;16:137-40

[16]

PlantD,HyrichKL.Replication of association of the PTPRC gene with response to anti-tumor necrosis factor therapy in a large UK cohort.Arthritis Rheum2012;64:665-70 PMCID:PMC3427899

[17]

ZervouMI,FlouriI.Lack of association of variants previously associated with anti-TNF medication response in rheumatoid arthritis patients: results from a homogeneous Greek population.PLoS One2013;8:e74375 PMCID:PMC3769251

[18]

CanhãoH,SantosMJ.TRAF1/C5 but not PTPRC variants are potential predictors of rheumatoid arthritis response to anti-tumor necrosis factor therapy.Biomed Res Int2015;2015:490295 PMCID:PMC4365300

[19]

CuiJ,ThomsonB.Rheumatoid arthritis risk allele PTPRC is also associated with response to anti-tumor necrosis factor alpha therapy.Arthritis Rheum2010;62:1849-61 PMCID:PMC3652476

[20]

LeeYH.Associations between PTPRC rs10919563 A/G and FCGR2A R131H polymorphisms and responsiveness to TNF blockers in rheumatoid arthritis: a meta-analysis.Rheumatol Int2016;36:837-44

[21]

SohaniZN,MeyreD. Q-Genie. 2015; pp. 1-4. Available from: http://fhs.mcmaster.ca/pgp/links.html [Last accessed on 29 Sep 2025]

[22]

SohaniZN,AlyassA.Empirical evaluation of the Q-Genie tool: a protocol for assessment of effectiveness.BMJ Open2016;6:e010403 PMCID:PMC4908888

[23]

SohaniZN,deSouza RJ.Assessing the quality of published genetic association studies in meta-analyses: the quality of genetic studies (Q-Genie) tool.BMC Genet2015;16:50 PMCID:PMC4431044

[24]

SchwarzerG,RückerG.Meta-analysis with R. Cham: Springer International Publishing; 2015.

[25]

RoseAB.Introns as gene regulators: a brick on the accelerator.Front Genet2018;9:672 PMCID:PMC6374622

[26]

Vaz-DragoR,Carmo-FonsecaM.Deep intronic mutations and human disease.Hum Genet2017;136:1093-111

[27]

Ingelman-SundbergM,LauschkeVM.Emerging trends in pharmacogenomics: from common variant associations toward comprehensive genomic profiling.Hum Genomics2023;17:105 PMCID:PMC10668450

[28]

WhyteML,BuchbergerA.The roseoloviruses downregulate the protein tyrosine phosphatase PTPRC (CD45).J Virol2021;95:e0162820

[29]

AlborzianDeh Sheikh A,Abdu-AllahHHM.The protein tyrosine phosphatase SHP-1 (PTPN6) but not CD45 (PTPRC) is essential for the ligand-mediated regulation of CD22 in BCR-ligated B cells.J Immunol2021;206:2544-51

[30]

Barashdi MA, Ali A, McMullin MF, Mills K. Protein tyrosine phosphatase receptor type C (PTPRC or CD45).J Clin Pathol2021;74:548-52 PMCID:PMC8380896

[31]

AletahaD.Diagnosis and management of rheumatoid arthritis: a review.JAMA2018;320:1360-72

[32]

StepanovAA,KopylovAT.Determination of heterogeneous proteomic and metabolomic response in anti-TNF and anti-IL-6 treatment of patients with rheumatoid arthritis.Life2023;13:596 PMCID:PMC9964360

[33]

FurstDE,BroderM.Tumor necrosis factor antagonists: different kinetics and/or mechanisms of action may explain differences in the risk for developing granulomatous infection.Semin Arthritis Rheum2006;36:159-67

[34]

LiYR.Trans-ethnic genome-wide association studies: advantages and challenges of mapping in diverse populations.Genome Med2014;6:91 PMCID:PMC4254423

[35]

HagaSB.Impact of limited population diversity of genome-wide association studies.Genet Med2010;12:81-4

AI Summary AI Mindmap
PDF

103

Accesses

0

Citation

Detail

Sections
Recommended

AI思维导图

/