A review of wastewater-based epidemiology for antimicrobial resistance surveillance

Leah M. Clarke , Jake W. O’Brien , Aimee K. Murray , William H. Gaze , Kevin V. Thomas

Journal of Environmental Exposure Assessment ›› 2024, Vol. 3 ›› Issue (1) : 7

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Journal of Environmental Exposure Assessment ›› 2024, Vol. 3 ›› Issue (1) :7 DOI: 10.20517/jeea.2023.29
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A review of wastewater-based epidemiology for antimicrobial resistance surveillance

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Abstract

Antimicrobial resistance (AMR) is recognized as one of the most serious threats to public health. Unparalleled population growth and accelerated rates of AMR emergence and dissemination have resulted in both novel resistance in pathogenic organisms and the re-appearance of infections that were formerly under control. Consequently, this has led to an increased quantity of infectious diseases. One of the main drivers of antimicrobial overuse is inappropriate prescribing in human and veterinary medicine. The ability to rapidly survey the spread of antimicrobial resistance within human populations is key for its prevention, intervention, and control. However, many constraints are present for current clinical surveillance systems and their capacity to determine AMR dynamics in the microbiome of healthy individuals as well as in clinical pathogens causing infections. Wastewater-based epidemiology (WBE) is an emergent technique that has the capacity to act as a supplementary measure for current infectious disease surveillance systems and as an early warning system for infectious disease outbreaks. The development of disease outbreaks to the community level can be monitored in real time through the analysis of population pooled wastewater. This review provides an introduction to using wastewater-based epidemiology to monitor AMR bacteria, as well as an overview of wastewater-based epidemiology and its components.

Keywords

Antimicrobial resistance / public health / wastewater / wastewater-based epidemiology

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Leah M. Clarke, Jake W. O’Brien, Aimee K. Murray, William H. Gaze, Kevin V. Thomas. A review of wastewater-based epidemiology for antimicrobial resistance surveillance. Journal of Environmental Exposure Assessment, 2024, 3(1): 7 DOI:10.20517/jeea.2023.29

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References

[1]

Antimicrobial Resistance Collaborators. Global burden of bacterial antimicrobial resistance in 2019: a systematic analysis.Lancet2022;399:629-55

[2]

O’ Neill J. Tackling drug-resistant infections globally: final report and reccomendations. 2016. Available from: https://amr-review.org/sites/default/files/160518_Final%20paper_with%20cover.pdf [Last accessed on 23 Feb 2024].

[3]

Prestinaci F,Pantosti A.Antimicrobial resistance: a global multifaceted phenomenon.Pathog Glob Health2015;109:309-18 PMCID:PMC4768623

[4]

WHO. Antimicrobial resistance: global report on surveillance. 2014. Available from: https://www.who.int/publications/i/item/9789241564748 [Last accessed on 23 Feb 2024].

[5]

Goff DA,Goldstein EJC.A global call from five countries to collaborate in antibiotic stewardship: united we succeed, divided we might fail.Lancet Infect Dis2017;17:e56-63

[6]

Antimicrobial resistance in the EU/EEA (EARS-Net) - annual epidemiological report for 2021. Available from: https://www.ecdc.europa.eu/en/publications-data/surveillance-antimicrobial-resistance-europe-2021 [Last accessed on 23 Feb 2024].

[7]

Allcock S,Holmes M.Antimicrobial resistance in human populations: challenges and opportunities.Glob Health Epidemiol Genom2017;2:e4

[8]

O’Neill J. Antimicrobial resistance: tackling a crisis for the health and wealth of nations. 2014. Available from: https://amr-review.org/sites/default/files/AMR%20Review%20Paper%20-%20Tackling%20a%20crisis%20for%20the%20health%20and%20wealth%20of%20nations_1.pdf [Last accessed on 23 Feb 2024].

[9]

Gullberg E,Berg OG.Selection of resistant bacteria at very low antibiotic concentrations.PLoS Pathog2011;7:e1002158 PMCID:PMC3141051

[10]

Christaki E,Tofarides A.Antimicrobial resistance in bacteria: mechanisms, evolution, and persistence.J Mol Evol2020;88:26-40

[11]

Bleuven C.Molecular and cellular bases of adaptation to a changing environment in microorganisms.Proc Biol Sci2016;283:20161458 PMCID:PMC5095378

[12]

Wright GD.Molecular mechanisms of antibiotic resistance.Chem Commun2011;47:4055-61

[13]

Blair JM,Baylay AJ,Piddock LJ.Molecular mechanisms of antibiotic resistance.Nat Rev Microbiol2015;13:42-51

[14]

Savageau MA.Escherichia coli habitats, cell types, and molecular mechanisms of gene control.Am Nat1983;122:732-44

[15]

Laxminarayan R,Wattal C.Antibiotic resistance-the need for global solutions.Lancet Infect Dis2013;13:1057-98

[16]

Larsson DGJ,Bengtsson-Palme J.Critical knowledge gaps and research needs related to the environmental dimensions of antibiotic resistance.Environ Int2018;117:132-8

[17]

Singer AC,Rhodes V.Review of antimicrobial resistance in the environment and its relevance to environmental regulators.Front Microbiol2016;7:1728 PMCID:PMC5088501

[18]

Hiltunen T,Laine AL.Antibiotic resistance in the wild: an eco-evolutionary perspective.Philos Trans R Soc Lond B Biol Sci2017;372:20160039 PMCID:PMC5182435

[19]

Woolhouse M,van Bunnik B.Antimicrobial resistance in humans, livestock and the wider environment.Philos Trans R Soc Lond B Biol Sci2015;370:20140083 PMCID:PMC4424433

[20]

von Wintersdorff CJH,van Niekerk JM.Dissemination of antimicrobial resistance in microbial ecosystems through horizontal gene transfer.Front Microbiol2016;7:173 PMCID:PMC4759269

[21]

Huijbers PM,de Jong MC,Vandenbroucke-Grauls CM.Role of the environment in the transmission of antimicrobial resistance to humans: a review.Environ Sci Technol2015;49:11993-2004

[22]

Ben W,Cao R,Zhang Y.Distribution of antibiotic resistance in the effluents of ten municipal wastewater treatment plants in China and the effect of treatment processes.Chemosphere2017;172:392-8

[23]

Stanton IC,Zhang L,Gaze WH.Evolution of antibiotic resistance at low antibiotic concentrations including selection below the minimal selective concentration.Commun Biol2020;3:467 PMCID:PMC7471295

[24]

Kraemer SA,Perron GG.Antibiotic pollution in the environment: from microbial ecology to public policy.Microorganisms2019;7:180 PMCID:PMC6616856

[25]

Leonard AF,Balfour AJ,Gaze WH.Human recreational exposure to antibiotic resistant bacteria in coastal bathing waters.Environ Int2015;82:92-100

[26]

O’Neill J. Antimicrobials in agriculture and the environment: reducing unnecessary use and waste. 2015. Available from: https://amr-review.org/sites/default/files/Antimicrobials%20in%20agriculture%20and%20the%20environment%20-%20Reducing%20unnecessary%20use%20and%20waste.pdf [Last accessed on 23 Feb 2024].

[27]

Murray AK,Yin X.Novel insights into selection for antibiotic resistance in complex microbial communities.mBio2018;9:e00969-18 PMCID:PMC6058293

[28]

Westhoff S,Qachach O,van Wezel GP.The evolution of no-cost resistance at sub-MIC concentrations of streptomycin in Streptomyces coelicolor.ISME J2017;11:1168-78 PMCID:PMC5437928

[29]

Zhang Y,Cen T.Sub-inhibitory concentrations of heavy metals facilitate the horizontal transfer of plasmid-mediated antibiotic resistance genes in water environment.Environ Pollut2018;237:74-82

[30]

Kraemer SA,Oliva A,Walsh DA.A resistome survey across hundreds of freshwater bacterial communities reveals the impacts of veterinary and human antibiotics use.Front Microbiol2022;13:995418 PMCID:PMC9629221

[31]

Yang Y,Song W.Plastics in the marine environment are reservoirs for antibiotic and metal resistance genes.Environ Int2019;123:79-86

[32]

Auguet O,Borrego CM.Sewers as potential reservoirs of antibiotic resistance.Sci Total Environ2017;605-6:1047-54

[33]

Carraro E,Bertino C,Bonetta S.Hospital effluents management: chemical, physical, microbiological risks and legislation in different countries.J Environ Manag2016;168:185-99

[34]

Fouz N,Yasir M.The contribution of wastewater to the transmission of antimicrobial resistance in the environment: implications of mass gathering settings.Trop Med Infect Dis2020;5:33 PMCID:PMC7157536

[35]

Forsberg KJ,Wang B,Sommer MO.The shared antibiotic resistome of soil bacteria and human pathogens.Science2012;337:1107-11 PMCID:PMC4070369

[36]

Andrade L,Hynds P,Majury A.Groundwater resources as a global reservoir for antimicrobial-resistant bacteria.Water Res2020;170:115360

[37]

Ramirez AJ,Usenko S.Occurrence of pharmaceuticals and personal care products in fish: results of a national pilot study in the United States.Environ Toxicol Chem2009;28:2587-97

[38]

Rovira P,Lakin SM.Characterization of the microbial resistome in conventional and “raised without antibiotics” beef and dairy production systems.Front Microbiol2019;10:1980 PMCID:PMC6736999

[39]

Doron A.The spectre of superbugs: waste, structural violence and antimicrobial resistance in India.Worldwide Waste2019;2:7

[40]

Call DR,Subbiah M.Do antibiotic residues in soils play a role in amplification and transmission of antibiotic resistant bacteria in cattle populations?.Front Microbiol2013;4:193 PMCID:PMC3708158

[41]

Amos GC,Gaze WH.Waste water effluent contributes to the dissemination of CTX-M-15 in the natural environment.J Antimicrob Chemother2014;69:1785-91 PMCID:PMC4054988

[42]

Andy IE.Occurrence and antibiogram of bacteria isolated from effluent and waste dump site soil of selected hospitals in Calabar Metropolis, Nigeria.Microbiol Res J Int2018;25:1-9

[43]

Westphal-Settele K,Balzer F,Schmithausen R.Die umwelt als reservoir für antibiotikaresistenzen. Ein wachsendes problem für die öffentliche gesundheit? The environment as a reservoir for antimicrobial resistance: a growing problem for public health?.Bundesgesundheitsbla2018;61:533-42

[44]

Martinez JL.Environmental pollution by antibiotics and by antibiotic resistance determinants.Environ Pollut2009;157:2893-902

[45]

Berendsen BJ,Memelink J,Stolker LA.The analysis of animal faeces as a tool to monitor antibiotic usage.Talanta2015;132:258-68

[46]

Hendriksen RS,Njage P.Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage.Nat Commun2019;10:1124

[47]

Meyer E,Deja M.Antibiotic consumption and resistance: data from Europe and Germany.Int J Med Microbiol2013;303:388-95

[48]

Novo A,Viana P,Manaia CM.Antibiotic resistance, antimicrobial residues and bacterial community composition in urban wastewater.Water Res2013;47:1875-87

[49]

Health Agency of Canada; in participation with the Canadian Food Inspection Agency; Canadian Institutes of Health Research; Health Canada; Agriculture and Agri-Food Canada. Antimicrobial resistance and use in Canada: a federal framework for action.Can Commun Dis Rep2014;40:S-2

[50]

Larsson DGJ,Laxminarayan R.AMR, one health and the environment.Nat Microbiol2023;8:754-5

[51]

Tacconelli E,Harbarth S.EPI-Net COMBACTE-MAGNET GroupSurveillance for control of antimicrobial resistance.Lancet Infect Dis2018;18:e99-106

[52]

World Health Organization. Global action plan on antimicrobial resistance. 2016; pp. 1-28. Available from: https://www.who.int/publications/i/item/9789241509763 [Last accessed on 23 Feb 2024].

[53]

Grundmann H,Walsh T.A framework for global surveillance of antibiotic resistance.Drug Resist Updat2011;14:79-87

[54]

Gaze WH. Stanton I. et al. Towards developing an international environmental AMR surveillance strategy. 2022. Available from: https://www.researchgate.net/publication/363647959_Towards_developing_an_international_environmental_AMR_surveillance_strategy [Last accessed on 23 Feb 2024].

[55]

Sims N.Future perspectives of wastewater-based epidemiology: monitoring infectious disease spread and resistance to the community level.Environ Int2020;139:105689 PMCID:PMC7128895

[56]

Seale AC,Fernandes S.Supporting surveillance capacity for antimicrobial resistance: laboratory capacity strengthening for drug resistant infections in low and middle income countries.Wellcome Open Res2017;2:91 PMCID:PMC5686477

[57]

AURA 2019: third Australian report on antimicrobial use and resistance in human health. Available from: https://www.safetyandquality.gov.au/aura-2019 [Last accessed on 23 Feb 2024].

[58]

World Health Organization. Global antimicrobial resistance and use surveillance system (GLASS) report: 2022. Available from: https://www.who.int/publications/i/item/9789240062702 [Last accessed on 23 Feb 2024].

[59]

Aenishaenslin C,Ravel A,Stärk K.Evidence needed for antimicrobial resistance surveillance systems.Bull World Health Organ2019;97:283-9 PMCID:PMC6438253

[60]

Durso LM.One health and antibiotic resistance in agroecosystems.Ecohealth2019;16:414-9 PMCID:PMC6858902

[61]

Webb HE,Granier SA,Loneragan GH.Illustrative examples of probable transfer of resistance determinants from food animals to humans: streptothricins, glycopeptides, and colistin.F1000Res2017;6:1805 PMCID:PMC5686510

[62]

Canada PHAo. Canadian integrated program for antimicrobial resistance surveillance (CIPARS). Annual report 2008. Available from: https://www.phac-aspc.gc.ca/cipars-picra/2008/pdf/cipars-picra-2008-eng.pdf [Last accessed on 23 Feb 2024].

[63]

Centers for Disease Control and Prevention. National antimicrobial resistance monitoring system for enteric bacteria (NARMS). 2023. Available from: https://www.cdc.gov/narms/index.html [Last accessed on 23 Feb 2024].

[64]

Ahrenfeldt J,Loft IC.Metaphylogenetic analysis of global sewage reveals that bacterial strains associated with human disease show less degree of geographic clustering.Sci Rep2020;10:3033 PMCID:PMC7033184

[65]

Hall W,Kirkbride P.An analysis of ethical issues in using wastewater analysis to monitor illicit drug use.Addiction2012;107:1767-73

[66]

Centre for Disease Control and Prevention. National wastewater surveillance system. 2023. Available from: https://www.cdc.gov/nwss/wastewater-surveillance.html [Last accessed on 23 Feb 2024].

[67]

Castrignanò E,Feil EJ.Enantiomeric profiling of quinolones and quinolones resistance gene qnrS in European wastewaters.Water Res2020;175:115653

[68]

O’Brien JW,Banks APW.A National wastewater monitoring program for a better understanding of public health: a case study using the Australian census.Environ Int2019;122:400-11

[69]

Gracia-Lor E,Hernández F,Castiglioni S.Wastewater-based epidemiology as a novel biomonitoring tool to evaluate human exposure to pollutants.Environ Sci Technol2018;52:10224-6

[70]

Choi PM,Donner E.Wastewater-based epidemiology biomarkers: past, present and future.TrAC Trends Anal Chem2018;105:453-69

[71]

Daughton CG.Illicit drugs in municipal sewage: proposed new nonintrusive tool to heighten public awareness of societal use of illicit-abused drugs and their potential for ecological consequences.ACS Symp Ser2001;791:348-64

[72]

Zuccato E,Castiglioni S,Fanelli R.Estimating community drug abuse by wastewater analysis.Environ Health Perspect2008;116:1027-32 PMCID:PMC2516581

[73]

Thomas KV,Castiglioni S.Comparing illicit drug use in 19 European cities through sewage analysis.Sci Total Environ2012;432:432-9

[74]

Choi PM,Samanipour S.Social, demographic, and economic correlates of food and chemical consumption measured by wastewater-based epidemiology.Proc Natl Acad Sci USA2019;116:21864-73 PMCID:PMC6815118

[75]

Lai FY,Hall W.Measuring spatial and temporal trends of nicotine and alcohol consumption in Australia using wastewater-based epidemiology.Addiction2018;113:1127-36

[76]

Tscharke BJ,Gerber JP.Estimates of tobacco use by wastewater analysis of anabasine and anatabine.Drug Test Anal2016;8:702-7

[77]

Halden R,Kraberger S,Steele J. Tracking harmful chemicals and pathogens using the human health observatory at ASU. 2019. Available from: https://ojphi.org/ojs/index.php/ojphi/article/view/9843 [Last accessed on 23 Feb 2024].

[78]

Boleda MR,Ventura F.Trace determination of cannabinoids and opiates in wastewater and surface waters by ultra-performance liquid chromatography-tandem mass spectrometry.J Chromatogr A2007;1175:38-48

[79]

Castiglioni S,Crisci E,Fanelli R.Identification and measurement of illicit drugs and their metabolites in urban wastewater by liquid chromatography-tandem mass spectrometry.Anal Chem2006;78:8421-9

[80]

Boogaerts T,Kinyua J,van Nuijs AL.Spatial and temporal trends in alcohol consumption in Belgian cities: a wastewater-based approach.Drug Alcohol Depend2016;160:170-6

[81]

Reid MJ,Mørland J.Analysis and interpretation of specific ethanol metabolites, ethyl sulfate, and ethyl glucuronide in sewage effluent for the quantitative measurement of regional alcohol consumption.Alcohol Clin Exp Res2011;35:1593-9

[82]

Rodríguez-Álvarez T,Rico M,Quintana JB.Assessment of local tobacco consumption by liquid chromatography-tandem mass spectrometry sewage analysis of nicotine and its metabolites, cotinine and trans-3’-hydroxycotinine, after enzymatic deconjugation.Anal Chem2014;86:10274-81

[83]

Ahmed W,Bertsch PM.SARS-CoV-2 RNA monitoring in wastewater as a potential early warning system for COVID-19 transmission in the community: a temporal case study.Sci Total Environ2021;761:144216 PMCID:PMC7718102

[84]

Bade R,Nguyen L.Determining changes in new psychoactive substance use in Australia by wastewater analysis.Sci Total Environ2020;731:139209

[85]

Reid MJ,Thomas KV.Analysis of new classes of recreational drugs in sewage: synthetic cannabinoids and amphetamine-like substances.Drug Test Anal2014;6:72-9

[86]

Daughton CG.Monitoring wastewater for assessing community health: sewage chemical-information mining (SCIM).Sci Total Environ2018;619-20:748-64 PMCID:PMC6091531

[87]

O’Brien JW,Bade R.A wastewater-based assessment of the impact of a minimum unit price (MUP) on population alcohol consumption in the Northern Territory, Australia.Addiction2022;117:243-9

[88]

Aarestrup FM.Using sewage for surveillance of antimicrobial resistance.Science2020;367:630-2

[89]

Robins K,Farkas K.Research needs for optimising wastewater-based epidemiology monitoring for public health protection.J Water Health2022;20:1284-313

[90]

Holton E,Archer E,Wolfaardt G.Quantifying community-wide antibiotic usage via urban water fingerprinting: focus on contrasting resource settings in South Africa.Water Res2023;240:120110

[91]

Xu L,Cong W.Assessment of community-wide antimicrobials usage in Eastern China using wastewater-based epidemiology.Water Res2022;222:118942

[92]

Rahman Z,Stapleton L.Wastewater-based monitoring reveals geospatial-temporal trends for antibiotic-resistant pathogens in a large urban community.Environ Pollut2023;325:121403

[93]

Thai PK,Banks APW.Evaluating the in-sewer stability of three potential population biomarkers for application in wastewater-based epidemiology.Sci Total Environ2019;671:248-53

[94]

Berendonk TU,Merlin C.Tackling antibiotic resistance: the environmental framework.Nat Rev Microbiol2015;13:310-7

[95]

Laht M,Voolaid V.Abundances of tetracycline, sulphonamide and beta-lactam antibiotic resistance genes in conventional wastewater treatment plants (WWTPs) with different waste load.PLoS One2014;9:e103705 PMCID:PMC4118896

[96]

Li J,He C.Direct injection liquid chromatography-tandem mass spectrometry as a sensitive and high-throughput method for the quantitative surveillance of antimicrobials in wastewater.Sci Total Environ2023;900:165825

[97]

Ort C,Rieckermann J.Sampling for pharmaceuticals and personal care products (PPCPs) and illicit drugs in wastewater systems: are your conclusions valid? A critical review.Environ Sci Technol2010;44:6024-35

[98]

Lin X,Thompson J.Systematic evaluation of the in-sample stability of selected pharmaceuticals, illicit drugs, and their metabolites in wastewater.Environ Sci Technol2021;55:7418-29

[99]

Schiebelhut LM,Gómez Daglio LE,Dawson MN.A comparison of DNA extraction methods for high-throughput DNA analyses.Mol Ecol Resour2017;17:721-9

[100]

Tanase AM,Chiciudean I.Comparison of total DNA extraction methods for microbial community form polluted soil.Agric Agric Sci Procedia2015;6:616-22

[101]

Zielińska S,Blendowska A,Łoś JM.The choice of the DNA extraction method may influence the outcome of the soil microbial community structure analysis.Microbiologyopen2017;6:e00453 PMCID:PMC5552907

[102]

Berendsen BJ,Stolker AA.Determination of the stability of antibiotics in matrix and reference solutions using a straightforward procedure applying mass spectrometric detection.Food Addit Contam Part A Chem Anal Control Expo Risk Assess2011;28:1657-66

[103]

McCall AK,Kinyua J.Critical review on the stability of illicit drugs in sewers and wastewater samples.Water Res2016;88:933-47

[104]

Yang Z,Estrela P,Kasprzyk-Hordern B.Community sewage sensors towards evaluation of drug use trends: detection of cocaine in wastewater with DNA-directed immobilization aptamer sensors.Sci Rep2016;6:21024 PMCID:PMC4753446

[105]

Tscharke BJ,Ort C.Harnessing the power of the census: characterizing wastewater treatment plant catchment populations for wastewater-based epidemiology.Environ Sci Technol2019;53:10303-11

[106]

O’Brien JW,Eaglesham G.A model to estimate the population contributing to the wastewater using samples collected on census day.Environ Sci Technol2014;48:517-25

[107]

Dutta E,Deal CA.Development of a multiplex real-time PCR assay for predicting macrolide and tetracycline resistance associated with bacterial pathogens of bovine respiratory disease.Pathogens2021;10:64 PMCID:PMC7828349

[108]

Ciannella S,Gomez-Pastora J.Recent progress on wastewater-based epidemiology for COVID-19 surveillance: a systematic review of analytical procedures and epidemiological modeling.Sci Total Environ2023;878:162953 PMCID:PMC10028212

[109]

Jiménez-Rodríguez MG,Parra-Arroyo L.Biosensors for the detection of disease outbreaks through wastewater-based epidemiology.Trends Anal Chem2022;155:116585 PMCID:PMC8898787

[110]

Bauer S.Societal and ethical issues in human biomonitoring-a view from science studies.Environ Health2008;7:S10 PMCID:PMC2423460

[111]

Prichard J,Zuccato E. Ethical research guidelines for wastewater-based epidemiology and related fields. 2015. Available from: https://qaehs.centre.uq.edu.au/files/880/WBE%20Ethical%20Guidelines.pdf [Last accessed on 23 Feb 2024].

[112]

Carneiro J,Semedo M.Mapping human pathogens in wastewater using a metatranscriptomic approach.Environ Res2023;231:116040 PMCID:PMC10172761

[113]

Schaeffer J,Besnard A.Looking into sewage: how far can metagenomics help to detect human enteric viruses?.Front Microbiol2023;14:1161674 PMCID:PMC10166864

[114]

da Silva M, Vaz-Moreira I, Gonzalez-Pajuelo M, Nunes OC, Manaia CM. Antimicrobial resistance patterns in Enterobacteriaceae isolated from an urban wastewater treatment plant.FEMS Microbiol Ecol2007;60:166-76

[115]

Savin M,Hammerl JA.Antibiotic-resistant bacteria and antimicrobial residues in wastewater and process water from German pig slaughterhouses and their receiving municipal wastewater treatment plants.Sci Total Environ2020;727:138788

[116]

Varela AR,Nunes OC.Insights into the relationship between antimicrobial residues and bacterial populations in a hospital-urban wastewater treatment plant system.Water Res2014;54:327-36

[117]

Coutu S,Wynn HK,Barry DA.Temporal dynamics of antibiotics in wastewater treatment plant influent.Sci Total Environ2013;458-60:20-6

[118]

Golovko O,Fedorova G,Grabic R.Seasonal changes in antibiotics, antidepressants/psychiatric drugs, antihistamines and lipid regulators in a wastewater treatment plant.Chemosphere2014;111:418-26

[119]

Ekwanzala MD,Kasonga TK,Momba MNB.Environmental dissemination of selected antibiotics from hospital wastewater to the aquatic environment.Antibiotics2020;9:431 PMCID:PMC7400012

[120]

Li Y,McKenzie C.A SPE-HPLC-MS/MS method for the simultaneous determination of prioritised pharmaceuticals and EDCs with high environmental risk potential in freshwater.J Environ Sci2021;100:18-27

[121]

Serra-Compte A,Elferink A.Combining an effect-based methodology with chemical analysis for antibiotics determination in wastewater and receiving freshwater and marine environment.Environ Pollut2021;271:116313

[122]

Keshaviah A,Henry M.Developing a flexible national wastewater surveillance system for COVID-19 and beyond.Environ Health Perspect2021;129:45002

[123]

Nourbakhsh S,Li M.A wastewater-based epidemic model for SARS-CoV-2 with application to three Canadian cities.Epidemics2022;39:100560 PMCID:PMC8993419

[124]

Field E,Hewett M.Development of the COVID-19 real-time information system for preparedness and epidemic response (CRISPER), Australia.Front Public Health2021;9:753493 PMCID:PMC8631999

[125]

Fernandez-Cassi X,Martínez-Puchol S.Metagenomics for the study of viruses in urban sewage as a tool for public health surveillance.Sci Total Environ2018;618:870-80

[126]

Petrovich ML,Kaplan A.Microbial and viral communities and their antibiotic resistance genes throughout a hospital wastewater treatment system.Front Microbiol2020;11:153 PMCID:PMC7042388

[127]

Yasir M.Analysis of microbial communities and pathogen detection in domestic sewage using metagenomic sequencing.Diversity2021;13:6

[128]

Yoo K,Lee J,Park J.Exploring the antibiotic resistome in activated sludge and anaerobic digestion sludge in an urban wastewater treatment plant via metagenomic analysis.J Microbiol2020;58:123-30

[129]

Smith R.The true cost of antimicrobial resistance.BMJ2013;346:f1493

[130]

Alekshun MN.Molecular mechanisms of antibacterial multidrug resistance.Cell2007;128:1037-50

[131]

Mao D,Rysz M.Prevalence and proliferation of antibiotic resistance genes in two municipal wastewater treatment plants.Water Res2015;85:458-66

[132]

Rodriguez-Mozaz S,Marti E.Occurrence of antibiotics and antibiotic resistance genes in hospital and urban wastewaters and their impact on the receiving river.Water Res2015;69:234-42

[133]

Sun Y,Liang P,Yang Y.Multiple antibiotic resistance genes distribution in ten large-scale membrane bioreactors for municipal wastewater treatment.Bioresour Technol2016;222:100-6

[134]

Gao P,Xagoraraki I.Correlation of tetracycline and sulfonamide antibiotics with corresponding resistance genes and resistant bacteria in a conventional municipal wastewater treatment plant.Sci Total Environ2012;421-2:173-83

[135]

Sims N,Holton E.Antimicrobials and antimicrobial resistance genes in a one-year city metabolism longitudinal study using wastewater-based epidemiology.Environ Pollut2023;333:122020

[136]

Xu J,Wang H.Occurrence of antibiotics and antibiotic resistance genes in a sewage treatment plant and its effluent-receiving river.Chemosphere2015;119:1379-85

[137]

Elder FCT,Barden R.Spatiotemporal profiling of antibiotics and resistance genes in a river catchment: Human population as the main driver of antibiotic and antibiotic resistance gene presence in the environment.Water Res2021;203:117533

[138]

BioRender. Adapted from “FullTemplateName”. 2023. Available from: https://www.biorender.com/ [Last accessed on 23 Feb 2024].

[139]

Holton E,Jagadeesan K,Kasprzyk-Hordern B.Quantifying community-wide antimicrobials usage via wastewater-based epidemiology.J Hazard Mater2022;436:129001

[140]

Manoharan RK,Shanmugam G.Shotgun metagenomic analysis reveals the prevalence of antibiotic resistance genes and mobile genetic elements in full scale hospital wastewater treatment plants.J Environ Manag2021;296:113270

[141]

Prieto Riquelme MV,Gupta S.Demonstrating a comprehensive wastewater-based surveillance approach that differentiates globally sourced resistomes.Environ Sci Technol2022;56:14982-93

[142]

Che Y,Liu L,Yang Y.Mobile antibiotic resistome in wastewater treatment plants revealed by Nanopore metagenomic sequencing.Microbiome2019;7:44 PMCID:PMC6429696

[143]

Makowska N,Dabert M.Metagenomic analysis of β-lactamase and carbapenemase genes in the wastewater resistome.Water Res2020;170:115277

[144]

Rhoads A.PacBio sequencing and its applications.Genom Proteom Bioinf2015;13:278-89 PMCID:PMC4678779

[145]

Kanwar N,Chen IA.PacBio sequencing output increased through uniform and directional fivefold concatenation.Sci Rep2021;11:18065 PMCID:PMC8433307

[146]

Zhang L,Zeng Z.Advances in metagenomics and its application in environmental microorganisms.Front Microbiol2021;12:766364 PMCID:PMC8719654

[147]

New FN.What is metagenomics teaching us, and what is missed?.Annu Rev Microbiol2020;74:117-35

[148]

Al-Jassim N,Harb M.Removal of bacterial contaminants and antibiotic resistance genes by conventional wastewater treatment processes in Saudi Arabia: is the treated wastewater safe to reuse for agricultural irrigation?.Water Res2015;73:277-90

[149]

Quintela-Baluja M,Romalde J.Spatial ecology of a wastewater network defines the antibiotic resistance genes in downstream receiving waters.Water Res2019;162:347-57 PMCID:PMC6650630

[150]

Munk P,Møller FD.Global Sewage Surveillance ConsortiumGenomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance.Nat Commun2022;13:7251

[151]

Majlander J,Nurmi W,Tiedje J.Routine wastewater-based monitoring of antibiotic resistance in two finnish hospitals: focus on carbapenem resistance genes and genes associated with bacteria causing hospital-acquired infections.J Hosp Infect2021;117:157-64

[152]

Wang Q,Yang Q.Occurrence and diversity of antibiotic resistance in untreated hospital wastewater.Sci Total Environ2018;621:990-9

[153]

Mtetwa HN,Kumari S,Reddy P.Wastewater-based surveillance of antibiotic resistance genes associated with tuberculosis treatment regimen in kwazulu natal, South Africa.Antibiotics2021;10:1362 PMCID:PMC8614817

[154]

Ou Y,Zhang J,Yang Z.Droplet microfluidics on analysis of pathogenic microbes for wastewater-based epidemiology.Trends Anal Chem2021;143:116333 PMCID:PMC8547957

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