Code-based data visualization is a crucial tool for understanding and communicating experimental findings while ensuring scalability and reproducibility. However, complex programming interfaces pose a significant barrier for life scientists. To address this challenge, tidyplots provides a user-friendly code-based interface for creating customizable and insightful plots. With its consistent and intuitive syntax, tidyplots empowers researchers to leverage automated data visualization pipelines while minimizing required programming skills.
| [1] |
Wickham, Hadley, Mine Çetinkaya-Rundel, and Garrett Grolemund. 2023. “R for Data Science.” https://r4ds.hadley.nz
|
| [2] |
Wilke, Claus O. 2019. “Fundamentals of Data Visualization.” https://clauswilke.com/dataviz/
|
| [3] |
Wickham, Hadley, Mara Averick, Jennifer Bryan, Winston Chang, Lucy McGowan, Romain François, Garrett Grolemund, et al. 2019. “Welcome to the Tidyverse.” Journal of Open Source Software 4: 1686. https://doi.org/10.21105/joss.01686
|
| [4] |
Wickham, Hadley. 2016. “ggplot2: Elegant Graphics for Data Analysis.” https://ggplot2.tidyverse.org
|
| [5] |
Patil, Indrajeet. 2021. “Visualizations With Statistical Details: the ‘Ggstatsplot’ Approach.” Journal of Open Source Software 6: 3167. https://doi.org/10.21105/joss.03167
|
| [6] |
Kassambara, Alboukadel. 2023. “ggpubr: ‘ggplot2’ Based Publication Ready Plots.” https://doi.org/10.32614/cran.package.ggpubr
|
| [7] |
Schattling, Benjamin, Jan Broder Engler, Constantin Volkmann, Nicola Rothammer, Marcel S. Woo, Meike Petersen, Iris Winkler, et al. 2019. “Bassoon Proteinopathy Drives Neurodegeneration in Multiple Sclerosis.” Nature Neuroscience 22: 887-896. https://doi.org/10.1038/s41593-019-0385-4
|
| [8] |
Tamburini, Fiona B., Dylan Maghini, Ovokeraye H. Oduaran, Ryan Brewster, Michaella R. Hulley, Venesa Sahibdeen, Shane A. Norris, et al. 2022. “Short- and Long-Read Metagenomics of Urban and Rural South African Gut Microbiomes Reveal a Transitional Composition and Undescribed Taxa.” Nature Communications 13: 926. https://doi.org/10.1038/s41467-021-27917-x
|
| [9] |
Spellman, Paul T., Gavin Sherlock, Michael Q. Zhang, Vishwanath R. Iyer, Kirk Anders, Michael B. Eisen, Patrick O. Brown, David Botstein, and Bruce Futcher. 1998. “Comprehensive Identification of Cell Cycle-Regulated Genes of the Yeast Saccharomyces cerevisiae by Microarray Hybridization.” Molecular Biology of the Cell 9: 3273-3297. https://doi.org/10.1091/mbc.9.12.3273
|
| [10] |
Wickham, Hadley. 2018. “Tidy Design Principles.” https://design.tidyverse.org
|
| [11] |
Wickham, Hadley. 2019. “Advanced R.” https://adv-r.hadley.nz
|
| [12] |
Pedersen, Thomas Lin. 2024. “Patchwork: The Composer of Plots.” https://doi.org/10.32614/cran.package.patchwork
|
| [13] |
Petukhov, Viktor, Teun van den Brand, and Evan Biederstedt. 2023. “ggrastr: Raster Layers for ‘ggplot2’.” https://doi.org/10.32614/cran.package.ggrastr
|
| [14] |
Clarke, Erik, Scott Sherrill-Mix, and Charlotte Dawson. 2023. “ggbeeswarm: Categorical Scatter (Violin Point) Plots.” https://doi.org/10.32614/cran.package.ggbeeswarm
|
| [15] |
Slowikowski, Kamil. 2024. “ggrepel: Automatically Position Non-Overlapping Text Labels With ‘ggplot2’.” https://doi.org/10.32614/cran.package.ggrepel
|
RIGHTS & PERMISSIONS
2025 The Author(s). iMeta published by John Wiley & Sons Australia, Ltd on behalf of iMeta Science.