SeqKit2: A Swiss army knife for sequence and alignment processing

Wei Shen , Botond Sipos , Liuyang Zhao

iMeta ›› 2024, Vol. 3 ›› Issue (3) : 191

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iMeta ›› 2024, Vol. 3 ›› Issue (3) : 191 DOI: 10.1002/imt2.191
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SeqKit2: A Swiss army knife for sequence and alignment processing

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Abstract

•SeqKit2 expands its capabilities, doubling the number of subcommands from 19 to 38, and adding support for three more compression file formats.

•SeqKit2 outperforms its predecessor and maintains competitive with other tools.

•SeqKit2 improves user-friendliness with new features, like, autocompletion, progress bars, and enhanced error handling.

Keywords

performance optimization / real-time analysis / sequence processing / usability / user-friendly

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Wei Shen,Botond Sipos,Liuyang Zhao. SeqKit2: A Swiss army knife for sequence and alignment processing. iMeta, 2024, 3(3): 191 DOI:10.1002/imt2.191

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2024 The Authors. iMeta published by John Wiley & Sons Australia, Ltd on behalf of iMeta Science.

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