Involvement of the LcARF17- and LcRAP2-4-LcLOX7 regulatory modules in the biosynthesis of fresh aroma in litchi aril

Zhuoyi Liu , Yimeng Wang , Hang Zhang , Zidi He , Zhiqi Li , Ke Ma , Minglei Zhao , Jianguo Li , Xingshuai Ma

Horticulture Research ›› 2026, Vol. 13 ›› Issue (4) : 10

PDF (3456KB)
Horticulture Research ›› 2026, Vol. 13 ›› Issue (4) :10 DOI: 10.1093/hr/uhag010
ARTICLES
research-article
Involvement of the LcARF17- and LcRAP2-4-LcLOX7 regulatory modules in the biosynthesis of fresh aroma in litchi aril
Author information +
History +
PDF (3456KB)

Abstract

Fatty acid-derived volatile organic compounds (VOCs), especially C 6 and C 9 aldehydes and alcohols, are vital contributors to the fresh aroma of fruits. However, the specific volatiles responsible for this freshness and their biosynthetic regulatory mechanisms remain poorly characterized in litchi (Litchi chinensis Sonn.). In this study, we systematically characterized the VOC profiles of 24 representative litchi cultivars and identified four critical compounds- trans,cis-2,6-nonadien-1-ol, 1-hexanol, (E)-6-nonenal, and (E)-2-hexen-1-ol-as primary determinants of fresh-aroma variation. Weighted gene co-expression network analysis of the transcriptomic data, corroborated by RT-qPCR, revealed a strong positive correlation between the expression of LcLOX7 and the abundance of these key fresh-aroma volatiles. Functional characterization via LcLOX7 overexpression in litchi callus and tomato fruits validated its pivotal role in enhancing the biosynthesis of fatty acid-derived VOCs, specifically C 9 volatiles. Subsequent in vivo and in vitro assays confirmed the direct transcriptional activation of LcLOX7 by two transcription factors (TF), LcARF17 and LcRAP2-4. The expression patterns of these TFs correlated with the accumulation of key fresh-aroma volatiles across different litchi cultivars and paralleled LcLOX7 expression during fruit ripening. Moreover, overexpression and silencing of LcARF17 or LcRAP2-4 in litchi callus validated their regulatory function in promoting C 9 volatile synthesis. Our findings collectively support a regulatory model wherein the LcARF17/LcRAP2-4–LcLOX7 module orchestrates the biosynthesis of fresh aroma in litchi fruit. Notably, this study provides the first evidence that ARF transcription factor participates in the formation of fresh fruit aroma, thereby offering novel insights for the molecular breeding of flavor quality in fruit crops.

Cite this article

Download citation ▾
Zhuoyi Liu, Yimeng Wang, Hang Zhang, Zidi He, Zhiqi Li, Ke Ma, Minglei Zhao, Jianguo Li, Xingshuai Ma. Involvement of the LcARF17- and LcRAP2-4-LcLOX7 regulatory modules in the biosynthesis of fresh aroma in litchi aril. Horticulture Research, 2026, 13 (4) : 10 DOI:10.1093/hr/uhag010

登录浏览全文

4963

注册一个新账户 忘记密码

Acknowledgements

This research was funded by the China Agricultural Research System (CARS-32-05), the National Natural Science Foundation of China (grant numbers 32330092 and 32202447), and the Natural Science Foundation of Guangdong Province (grant numbers 2023A1515012661). We extend our thankful to Researchers Huang X.F. and Yuan Y. from Dongguan Botanical Garden for their valuable contributions to the collection of litchi cultivars.

Author contributions

Jianguo Li, Xingshuai Ma, and Minglei Zhao conceived and designed the study; Zhuoyi Liu performed all of the experiments; Yimeng Wang, Ke Ma, Zidi He, Zhiqi Li, and Hang Zhang provided technical assistance; Zhuoyi Liu, Xingshuai Ma, Minglei Zhao, and Jianguo Li drafted and revised the manuscript.

Data availability

All data generated or analyzed during this study are included in this published article and its supplementary information files.

Conflicts of interest statement

The authors declare no competing interests.

Supplementary material

Supplementary material is available at Horticulture Research online.

References

[1]

Hu G , Feng J , Xiang X , et al. Two divergent haplotypes from a highly heterozygous lychee genome suggest independent domestication events for early and late-maturing cultivars. Nat Genet. 2022; 54: 73-83

[2]

Gous A , Almli V , Coetzee V , et al. Effects of varying the color, aroma, bitter, and sweet levels of a grapefruit-like model beverage on the sensory properties and liking of the consumer. Nutrients. 2019; 11: 464

[3]

Liu Z , Zhao M , Li J . Aroma volatiles in litchi fruit: a mini-review. Horticulturae. 2022; 8: 1166

[4]

Dong C , Li J , Zheng X , et al. Analysis on the flesh fragrance ingredient of ‘Bingli’, the new litchi specie by adopting HS-SPME/GC-MS. South China Agricult. 2022; 16: 12-6

[5]

Lin F . The key technology of high-yield and high-quality cultivation of ‘Guiwei’ lychee in southern Fujian. Fujian Sci Technol Trop Crops. 2024; 49: 45-7

[6]

Ma K , Gu C , Yin J , et al. An analysis of volatile components in ‘Guanyinlü’ litchi by headspace solid-phase microextraction with GC-MS. J South China Agricult Univ. 2015; 36: 113-6

[7]

El Hadi M , Zhang F , Wu F , et al. Advances in fruit aroma volatile research. Molecules. 2013; 18: 8200-29

[8]

Shen Y , Rao Y , Ma M , et al. Coordination among flower pigments, scents and pollinators in ornamental plants. Hortic Adv. 2024; 2: 1-18

[9]

Dudareva N , Klempien A , Muhlemann J , et al. Biosynthesis, function and metabolic engineering of plant volatile organic compounds. New Phytol. 2013; 198: 16-32

[10]

Qiao Z , Song X , Kong Y , et al. Molecular mechanisms regulating ornamental traits and scent production in snapdragon (Antirrhinum majus L.). Hortic Adv. 2023; 1: 1-17

[11]

Leng L , Huang R , Wu Z , et al. Metabolome and transcriptome reveal dynamic patterns of floral scent release and gene expression during flower development in carnation. Hortic Adv. 2025; 3: 1-14

[12]

Ma Q , Xu Y , Xiao H , et al. Rethinking of botanical volatile organic compounds applied in food preservation: challenges in acquisition, application, microbial inhibition and stimulation. Trends Food Sci Tech. 2022; 125: 166-84

[13]

Wen Y , He F , Zhu B , et al. Free and glycosidically bound aroma compounds in cherry (Prunus avium L.). Food Chem. 2014; 152: 29-36

[14]

Sun Y , Li X , Wang H , et al. The CsDof1.8-CsLIPOXYGENASE09 module regulates C9 aroma production in cucumber. Plant Physiol. 2024; 196: 338-51

[15]

Gong C , Diao W , Zhu H , et al. Metabolome and transcriptome integration reveals insights into flavor formation of ’crimson’ watermelon flesh during fruit development. Front Plant Sci. 2021; 12: 629361

[16]

Jiang Y , Qi Y , Chen X , et al. Identification of volatile compounds and analysis of aroma characteristics in litchi fruits of 6 special-early maturing and early maturing germplasms. J Fruit Sci. 2023; 40: 1915-31

[17]

Li J , Li W , Wang Y , et al. GC-MS analysis of aroma components in ‘Jingganghongnuo’ litchi pulp. South China Fruits. 2023; 52: 54-65

[18]

Liavonchanka A , Feussner I . Lipoxygenases: occurrence, functions and catalysis. J Plant Physiol. 2006; 163: 348-57

[19]

Liu S , Liu X , Jiang L , et al. Genome-wide identification, phylogeny and expression analysis of the lipoxygenase gene family in cucumber. Genet Mol Res. 2011; 10: 2613-36

[20]

Matsui K , Minami A , Hornung E , et al. Biosynthesis of fatty acid derived aldehydes is induced upon mechanical wounding and its products show fungicidal activities in cucumber. Phytochemistry. 2006; 67: 649-57

[21]

Gigot C , Ongena M , Fauconnier M , et al. The lipoxygenase metabolic pathway in plants: potential for industrial production of natural green leaf volatiles. Biotechnol Agron Soc Environ. 2010; 14: 451-60

[22]

Li Z , Wang Z , Wang K , et al. Co-expression network analysis uncovers key candidate genes related to the regulation of volatile esters accumulation in woodland strawberry. Planta. 2020; 252: 55

[23]

Contreras C , Schwab W , Mayershofer M , et al. Volatile compound and gene expression analyses reveal temporal and spatial production of LOX-derived volatiles in Pepino (Solanum muricatum Aiton) fruit and LOX specificity. J Agric Food Chem. 2017; 65: 6049-57

[24]

Huang D , Ma F , Wu B , et al. Genome-wide association and expression analysis of the lipoxygenase gene family in Passiflora edulis revealing PeLOX4 might be involved in fruit ripeness and ester formation. Int J Mol Sci. 2022; 23: 12496

[25]

Qian X , Sun L , Xu X , et al. Differential expression of VvLOXA diversifies C6 volatile profiles in some Vitis vinifera table grape cultivars. Int J Mol Sci. 2017; 18: 2705

[26]

Lu H , Li L , Xu Y , et al. FaLEC2 repressing FaLOX2 promoter involved in the metabolism of LOX-derived volatiles during strawberry ripening. Sci Hortic. 2022; 303: 111188

[27]

Lu H , Luo Z , Li D , et al. FaMYB11 promotes the accumulation of volatile esters by regulating FaLOX5 during strawberry (Fragaria × ananassa) ripening. Postharvest Biol Technol. 2021; 178: 111560

[28]

Liu Y , He H , Song H . Comparison of fresh watermelon juice aroma characteristics of five varieties based on gas chromatography-olfactometry-mass spectrometry. Food Res Int. 2018; 107: 119-29

[29]

Zhu J , Wang L , Xiao Z , et al. Characterization of the key aroma compounds in mulberry fruits by application of gas chromatography-olfactometry (GC-O), odor activity value (OAV), gas chromatography-mass spectrometry (GC-MS) and flame photometric detection (FPD). Food Chem. 2018; 245: 775-85

[30]

Meijboom P , Jongenotter G . Flavor perceptibility of straight chain, unsaturated aldehydes as a function of double-bond position and geometry. J Am Oil Chem. 1981; 58: 680-2

[31]

Yu A , Yang Y , Yang Y , et al. Free and bound volatile compounds in the Rubus coreanus fruits of different ripening stages. J Food Biochem. 2019; 43: e12964

[32]

Li J , Chen C , Zeng Z , et al. SapBase: a central portal for functional and comparative genomics of Sapindaceae species. J Integr Plant Biol. 2024; 66: 1561-70

[33]

Carlomagno A , Schubert A , Ferrandino A . Screening and evolution of volatile compounds during ripening of ‘Nebbiolo’, ‘Dolcetto’ and ‘Barbera’ (Vitis vinifera L.) neutral grapes by SBSE-GC/MS. Eur Food Res Technol. 2016; 242: 1221-33

[34]

Chen S , Zhang R , Hao L , et al. Profiling of volatile compounds and associated gene expression and enzyme activity during fruit development in two cucumber cultivars. PLoS One. 2015; 10: e0119444

[35]

Api A , Belsito D , Bhatia S , et al. RIFM fragrance ingredient safety assessment, (2E,6Z)-Nona-2,6-dien-1-ol, CAS registry number 28069-72-9. Food Chem Toxicol. 2015; 84: S57-65

[36]

Api A , Belsito D , Botelho D , et al. RIFM fragrance ingredient safety assessment, trans-2-hexenol, CAS registry number 928-95-0. Food Chem Toxicol. 2018; 118: S49-58

[37]

Cândido da Silva M , Cardoso Viana A , Araújo Carvalho A , et al. Impact of sulfite use and acidification on chemical quality components in thermally processed watermelon juices. Food Res Int. 2024; 180: 114088

[38]

Kaczmarska K , Chandra-Hioe M , Frank D , et al. Aroma characteristics of lupin and soybean after germination and effect of fermentation on lupin aroma. LWT-Food Sci Technol. 2018; 87: 225-33

[39]

Deshpande A , Chidley H , Oak P , et al. Isolation and characterization of 9-lipoxygenase and epoxide hydrolase 2 genes: insight into lactone biosynthesis in mango fruit (Mangifera indica L.). Phytochemistry. 2017; 138: 65-75

[40]

Feng K , Hou X , Xing G , et al. Advances in AP2/ERF super-family transcription factors in plant. Crit Rev Biotechnol. 2020; 40: 750-76

[41]

Li Y , Han S , Qi Y . Advances in structure and function of auxin response factor in plants. J Int Plant Biol. 2023; 65: 617-32

[42]

Tobaruela E , Gomes B , Bonato V , et al. Ethylene and auxin: hormonal regulation of volatile compound production during tomato (Solanum lycopersicum L.) fruit ripening. Front Plant Sci. 2021; 12: 765897

[43]

Zhong H , Chen J , Li C , et al. Selection of reliable reference genes for expression studies by reverse transcription quantitative real-time PCR in litchi under different experimental conditions. Plant Cell Rep. 2011; 30: 641-53

[44]

Løvdal T , Lillo C . Reference gene selection for quantitative real-time PCR normalization in tomato subjected to nitrogen, cold, and light stress. Anal Biochem. 2009; 387: 238-42

[45]

Langfelder P , Horvath S . WGCNA: an R package for weighted correlation network analysis. BMC Bioinformatics. 2008; 9: 559

[46]

Rauluseviciute I , Riudavets-Puig R , Blanc-Mathieu R , et al. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res. 2024; 52: D174-82

[47]

Bannenberg G , Martínez M , Hamberg M , et al. Diversity of the enzymatic activity in the lipoxygenase gene family of Arabidopsis thaliana. Lipids. 2009; 44: 85-95

[48]

Potter S , Luciani A , Eddy S , et al. HMMER web server: 2018 update. Nucleic Acids Res. 2018; 46: W200-4

[49]

Madeira F , Pearce M , Tivey A , et al. Search and sequence analysis tools services from EMBL-EBI in 2022. Nucleic Acids Res. 2022; 50: W276-9

[50]

Minh B , Schmidt H , Chernomor O , et al. IQ-TREE 2: new models and efficient methods for phylogenetic inference in the genomic era. Mol Biol Evol. 2020; 37: 1530-4

[51]

Letunic I , Bork P . Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation. Nucleic Acids Res. 2021; 49: W293-6

[52]

Chen C , Wu Y , Li J , et al. TBtools-II: a “one for all, all for one” bioinformatics platform for biological big-data mining. Mol Plant. 2023; 16: 1733-42

[53]

He Z , Ma X , Wang F , et al. LcERF10 functions as a positive regulator of litchi fruitlet abscission. Int J Biol Macromol. 2023; 250: 126264

[54]

Hellens R , Allan A , Friel E , et al. Transient expression vectors for functional genomics, quantification of promoter activity and RNA silencing in plants. Plant Methods. 2005; 1: 13

[55]

Ma X , Li C , Huang X , et al. Involvement of HD-ZIP I transcription factors LcHB2 and LcHB3 in fruitlet abscission by promoting transcription of genes related to the biosynthesis of ethylene and ABA in litchi. Tree Physiol. 2019; 39: 1600-13

[56]

Ma X , Xie X , He Z , et al. A LcDOF5.6-LcRbohD regulatory module controls the reactive oxygen species-mediated fruitlet abscission in litchi. Plant J. 2023; 113: 954-68

[57]

Qin Y , Zhang B , Luo X , et al. Development of an Agrobacterium tumefaciens-mediated transformation system for somatic embryos and transcriptome analysis of LcMYB1’s inhibitory effect on somatic embryogenesis in Litchi chinensis. J Integr Agric. 2025; 24: 594-609

[58]

Zhao M , Li C , Ma X , et al. KNOX protein KNAT1 regulates fruitlet abscission in litchi by repressing ethylene biosynthetic genes. J Exp Bot. 2020; 71: 4069-82

[59]

Schutze K , Harter K , Chaban C . Bimolecular fluorescence complementation (BiFC) to study protein-protein interactions in living plant cells. Methods Mol Biol. 2009; 479: 189-202

[60]

Wang F , Liang Z , Ma X , et al. LcMPK3 and LcMPK6 positively regulate fruitlet abscission in litchi. Mol Hortic. 2024; 4: 1-18

PDF (3456KB)

0

Accesses

0

Citation

Detail

Sections
Recommended

/