A BpbZIP4 transcription factor enhances drought resistance and root development in Betula platyphylla: insights into a gene regulatory network

Abstract

Drought is a major abiotic stress that poses a significant threat to plants. Basic leucine zipper (bZIP) transcription factors (TFs) are important for plant stress signal transduction. However, the specific functions and molecular mechanisms of bZIP TFs under drought stress are still unclear. In this study, a BpbZIP4 TF of Betula platyphylla (birch) that responds strongly to drought stress was identified. Transgenic birch plants with BpbZIP4 overexpression and RNA interference were developed for gain- and loss-of-function assays. Results from phenotypic, staining, and physiological analyses showed that BpbZIP4 significantly enhances drought resistance and promotes root growth in birch. A four-layer drought-responsive gene regulatory network (GRN) was constructed based on BpbZIP4 transgenic lines. Chromatin immunoprecipitation-polymerase chain reaction (ChIP-PCR) and quantitative reverse transcription-polymerase chain reaction (qRT-PCR) assays verified the putative interactions among genes at different hierarchical levels, confirming the reliability of the GRN. TF-Centered Y1H, ChIP, and β-glucuronidase (GUS) assays revealed that BpbZIP4 regulates the expression of second-layer TFs in the GRN by binding to two novel elements and one photosynthesis-responsive element. Furthermore, six randomly selected second-layer GRN TFs (BpMYB61, BpBEL1, BpWOX4, BpbHLH100, BpZAT11, and BpHB17), when transformed into birch plants, significantly influence birch’s drought tolerance. These results indicate that BpbZIP4 regulates second-layer TFs, thereby hierarchically relaying signals to bottom-layer functional genes, engaging multiple biological pathways, and ultimately enhancing drought resistance in birch. Collectively, these findings clarify the drought regulatory mechanism of BpbZIP4 and identify additional key genes for breeding drought-resistant birch varieties.

Acknowledgements

This project was funded by the National Natural Science Foundation of China (32471896) and Opening Project of State Key Laboratory of Tree Genetics and Breeding (K2024103).

Author contributions

H.S., writing-original draft, methodology, and formal analysis; K.X.P., data curation; X.M.Z., L.Y.W., B.R.L., and J.W.X., validation, methodology; H.Y.G. and Y.C.W., project administration, writing-review and editing, and funding acquisition.

Data availability statement

All relevant data are presented within the paper and its supplementary files. The RNA-Seq raw data can be found at NCBI (PRJNA1363668).

Conflicts of interest statement

The authors declare that they have no known competing interests or personal connections.

Supplementary material

Supplementary material is available at Horticulture Research online.

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