Decoding altitude-activated regulatory mechanisms occurring during apple peel ripening

Evangelos Karagiannis , Michail Michailidis , Georgia Tanou , Federico Scossa , Eirini Sarrou , George Stamatakis , Martina Samiotaki , Stefan Martens , Alisdair R. Fernie , Athanassios Molassiotis

Horticulture Research ›› 2020, Vol. 7 ›› Issue (1) : 120

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Horticulture Research ›› 2020, Vol. 7 ›› Issue (1) :120 DOI: 10.1038/s41438-020-00340-x
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Decoding altitude-activated regulatory mechanisms occurring during apple peel ripening
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Abstract

Apple (Malus domestica Borkh) is an important fruit crop cultivated in a broad range of environmental conditions. Apple fruit ripening is a physiological process, whose molecular regulatory network response to different environments is still not sufficiently investigated and this is particularly true of the peel tissue. In this study, the influence of environmental conditions associated with low (20 m) and high (750 m) altitude on peel tissue ripening was assessed by physiological measurements combined with metabolomic and proteomic analyses during apple fruit development and ripening. Although apple fruit ripening was itself not affected by the different environmental conditions, several key color parameters, such as redness and color index, were notably induced by high altitude. Consistent with this observation, increased levels of anthocyanin and other phenolic compounds, including cyanidin-3-O-galactoside, quercetin-3-O-rhamnoside, quercetin-3-O-rutinoside, and chlorogenic acid were identified in the peel of apple grown at high altitude. Moreover, the high-altitude environment was characterized by elevated abundance of various carbohydrates (e.g., arabinose, xylose, and sucrose) but decreased levels of glutamic acid and several related proteins, such as glycine hydroxymethyltransferase and glutamate–glyoxylate aminotransferase. Other processes affected by high altitude were the TCA cycle, the synthesis of oxidative/defense enzymes, and the accumulation of photosynthetic proteins. From the obtained data we were able to construct a metabolite-protein network depicting the impact of altitude on peel ripening. The combined analyses presented here provide new insights into physiological processes linking apple peel ripening with the prevailing environmental conditions.

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Evangelos Karagiannis, Michail Michailidis, Georgia Tanou, Federico Scossa, Eirini Sarrou, George Stamatakis, Martina Samiotaki, Stefan Martens, Alisdair R. Fernie, Athanassios Molassiotis. Decoding altitude-activated regulatory mechanisms occurring during apple peel ripening. Horticulture Research, 2020, 7 (1) : 120 DOI:10.1038/s41438-020-00340-x

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References

[1]

Segura, V., Cilas, C. & Costes, E. Dissecting apple tree architecture into genetic, ontogenetic and environmental effects: Mixed linear modelling of repeated spatial and temporal measures. N. Phytol. 178, 302-314 (2008).

[2]

Eccher, G., Ferrero, S., Populin, F., Colombo, L. & Botton, A. Apple (Malus domestica L. Borkh) as an emerging model for fruit development. Plant Biosyst. 148, 157-168 (2014).

[3]

Daccord, N. et al. High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development. Nat. Genet. 49, 1099-1106 (2017).

[4]

Duan, N. et al. Genome re-sequencing reveals the history of apple and supports a two-stage model for fruit enlargement. Nat. Commun. 8, 249 (2017).

[5]

Busatto, N., Tadiello, A., Trainotti, L. & Costa, F. Climacteric ripening of apple fruit is regulated by transcriptional circuits stimulated by cross-talks between ethylene and auxin. Plant Signal. Behav. 12, e1268312 (2017).

[6]

Espley, R. V. et al. Red colouration in apple fruit is due to the activity of the MYB transcription factor, MdMYB10. Plant J. 49, 414-427 (2007).

[7]

Karagiannis, E. et al. Comparative physiological and proteomic analysis reveal distinct regulation of peach skin quality traits by altitude. Front. Plant Sci. 7, 1-14 (2016).

[8]

Voronkov, A. S., Ivanova, T. V., Kuznetsova, E. I. & Kumachova, T. K. Adaptations of Malus domestica Borkh. (Rosaceae) fruits grown at different altitudes. Russ. J. Plant Physiol. 66, 922-931 (2019).

[9]

Sugiura, T., Ogawa, H., Fukuda, N. & Moriguchi, T. Changes in the taste and textural attributes of apples in response to climate change. Sci. Rep. 3, 2418 (2013).

[10]

Lin-Wang, K. et al. High temperature reduces apple fruit colour via modulation of the anthocyanin regulatory complex. Plant Cell Environ. 34, 1176-1190 (2011).

[11]

Bai, S. et al. An apple B-box protein, MdCOL11, is involved in UV-B- and temperature-induced anthocyanin biosynthesis. Planta 240, 1051-1062 (2014).

[12]

Charles, M. et al. Application of a sensory-instrumental tool to study apple texture characteristics shaped by altitude and time of harvest. J. Sci. Food Agric. 98, 1095-1104 (2018).

[13]

Giovannoni, J . Molecular biology of fruit maturation and ripening. Annu. Rev. Plant Physiol. Plant Mol. Biol. 52, 725-749 (2001).

[14]

Nath, P., Sane, V. A., Asif, M. H. H., Sane, A. P. & Trivedi, P. K. Fruit crops: omic approaches toward elucidation of abiotic stress tolerance. Improv. Crop Resist. Abiotic Stress 2, 1033-1048 (2012).

[15]

Karagiannis, E. et al. Systems-based approaches to unravel networks and individual elements involved in apple superficial scald. Front. Plant Sci. 11, 1-14 (2020).

[16]

Karagiannis, E. et al. Ethylene -dependent and -independent superficial scald resistance mechanisms in ‘Granny Smith’ apple fruit. Sci. Rep. 8, 1-16 (2018).

[17]

Molassiotis, A., Tanou, G., Filippou, P. & Fotopoulos, V. Proteomics in the fruit tree science arena: New insights into fruit defense, development, and ripening. Proteomics 13, 1871-1884 (2013).

[18]

Zhang, Z. et al. Transcriptome profiles reveal the crucial roles of hormone and sugar in the bud dormancy of Prunus mume. Sci. Rep. 8, 5090 (2018).

[19]

Okazaki, Y. et al. A chloroplastic UDP-Glucose pyrophosphorylase from Arabidopsis is the committed enzyme for the first step of sulfolipid biosynthesis. Plant Cell 21, 892-909 (2009).

[20]

Brikis, C. J. et al. Targeted quantitative profiling of metabolites and gene transcripts associated with 4-aminobutyrate (GABA) in apple fruit stored under multiple abiotic stresses. Hortic. Res. 5, 61 (2018).

[21]

Otulak-Kozieł, K., Kozieł, E. & Bujarski, J. J. Spatiotemporal changes in xylan-1/xyloglucan and xyloglucan xyloglucosyl transferase (XTH-Xet5) as a step-in of ultrastructural cell wall remodelling in potato-potato virus Y (PVYNTN) hypersensitive and susceptible reaction. Int. J. Mol. Sci. 19, 2287 (2018).

[22]

Ni, W. et al. Comparative iTRAQ proteomic profiling of susceptible and resistant apple cultivars infected by Alternaria alternata apple pathotype. Tree Genet. Genomes 13, 23 (2017).

[23]

Leterrier, M., Barroso, J. B., Palma, J. M. & Corpas, F. J. Cytosolic NADP-isocitrate dehydrogenase in Arabidopsis leaves and roots. Biol. Plant. 56, 705-710 (2012).

[24]

Sienkiewicz-Porzucek, A. et al. Mild reductions in mitochondrial NAD-dependent isocitrate dehydrogenase activity result in altered nitrate assimilation and pigmentation but do not impact growth. Mol. Plant 3, 156-173 (2010).

[25]

Pott, D. M., Osorio, S. & Vallarino, J. G. From central to specialized metabolism: an overview of some secondary compounds derived from the primary metabolism for their role in conferring nutritional and organoleptic characteristics to fruit. Front. Plant Sci. 10, 835 (2019).

[26]

Holderbaum, D. F., Kon, T., Kudo, T. & Guerra, M. P. Enzymatic browning, polyphenol oxidase activity, and polyphenols in four apple cultivars: dynamics during fruit development. HortScience 45, 1150-1154 (2010).

[27]

Łata, B., Trampczynska, A. & Paczesna, J. Cultivar variation in apple peel and whole fruit phenolic composition. Sci. Hortic. 121, 176-181 (2009).

[28]

Xie, X. Bin et al. The bHLH transcription factor MdbHLH3 promotes anthocyanin accumulation and fruit colouration in response to low temperature in apples. Plant Cell Environ. 35, 1884-1897 (2012).

[29]

Peng, J. et al. Study of physicochemical stability of anthocyanin extracts from black peanut skin and their digestion enzyme and adipogenesis inhibitory activities. LWT 107, 107-116 (2019).

[30]

Henry-Kirk, R. A. et al. Solar UV light regulates flavonoid metabolism in apple (Malus x domestica). Plant Cell Environ. 41, 675-688 (2018).

[31]

Schiller, D. et al. A dual positional specific lipoxygenase functions in the generation of flavor compounds during climacteric ripening of apple. Hortic. Res. 2, 15003 (2015).

[32]

Sadali, N. M., Sowden, R. G., Ling, Q. & Jarvis, R. P. Differentiation of chromoplasts and other plastids in plants. Plant Cell Rep. 38, 803-818 (2019).

[33]

Lytovchenko, A. et al. Tomato fruit photosynthesis is seemingly unimportant in primary metabolism and ripening but plays a considerable role in seed development. Plant Physiol. 157, 1650-1663 (2011).

[34]

Smillie, R. M. & Hetherington, S. E. Photoabatement by anthocyanin shields photosynthetic systems from light stress. Photosynthetica 36, 451-463 (1999).

[35]

Spinardi, A., Cola, G., Gardana, C. S. & Mignani, I. Variation of anthocyanin content and profile throughout fruit development and ripening of highbush blueberry cultivars grown at two different altitudes. Front. Plant Sci. 10, 1-14 (2019).

[36]

Forde, B. G. & Lea, P. J. Glutamate in plants: metabolism, regulation, and signalling. J. Exp. Bot. 58, 2339-2358 (2007).

[37]

Dennison, K. L. & Spalding, E. P. Glutamate-gated calcium fluxes in Arabidopsis. Plant Physiol. 124, 1511-1514 (2000).

[38]

Walch-Liu, P. et al. Nitrogen regulation of root branching. Ann. Bot. 97, 875-881 (2006).

[39]

Smith, A. M. & Zeeman, S. C. Quantification of starch in plant tissues. Nat. Protoc. 1, 1342-1345 (2006).

[40]

Karagiannis, E. et al. Postharvest responses of sweet cherry fruit and stem tissues revealed by metabolomic profiling. Plant Physiol. Biochem. 127, 478-484 (2018).

[41]

Michailidis, M. et al. An integrated metabolomic and gene expression analysis identifies heat and calcium metabolic networks underlying postharvest sweet cherry fruit senescence. Planta 250, 2009-2022 (2019).

[42]

Lombardo, V. A. et al. Metabolic profiling during peach fruit development and ripening reveals the metabolic networks that underpin each developmental stage. Plant Physiol. 157, 1696-1710 (2011).

[43]

Luedemann, A., Strassburg, K., Erban, A. & Kopka, J. TagFinder for the quantitative analysis of gas chromatography - Mass spectrometry (GC-MS)-based metabolite profiling experiments. Bioinformatics 24, 732-737 (2008).

[44]

Hummel, J., Strehmel, N., Selbig, J., Walther, D. & Kopka, J. Decision tree supported substructure prediction of metabolites from GC-MS profiles. Metabolomics 6, 322-333 (2010).

[45]

Roessner, U., Wagner, C., Kopka, J., Trethewey, R. N. & Willmitzer, L. Simultaneous analysis of metabolites in potato tuber by gas chromatography-mass spectrometry. Plant J. 23, 131-142 (2000).

[46]

Vrhovsek, U. et al. A versatile targeted metabolomics method for the rapid quantification of multiple classes of phenolics in fruits and beverages. J. Agric. Food Chem. 60, 8831-8840 (2012).

[47]

Arapitsas, P., Perenzoni, D., Nicolini, G. & Mattivi, F. Study of sangiovese wines pigment profile by UHPLC-MS/MS. J. Agric. Food Chem. 60, 10461-10471 (2012).

[48]

Ainalidou, A. et al. Integrated analysis of metabolites and proteins reveal aspects of the tissue-specific function of synthetic cytokinin in kiwifruit development and ripening. J. Proteom. 143, 318-333 (2016).

[49]

Kuhn, M. et al. STITCH 4: integration of protein-chemical interactions with user data. Nucleic Acids Res. 42, D401-D407 (2014).

[50]

Minas, I. S., Tanou, G., Karagiannis, E., Belghazi, M. & Molassiotis, A. Coupling of physiological and proteomic analysis to understand the ethylene- and chilling-induced kiwifruit ripening syndrome. Front. Plant Sci. 7, 120 (2016).

[51]

Perez-Riverol, Y. et al. The PRIDE database and related tools and resources in 2019: improving support for quantification data. Nucleic Acids Res. 47, 442-450 (2019).

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