MicroRNA396-mediated alteration in plant development and salinity stress response in creeping bentgrass

Shuangrong Yuan , Junming Zhao , Zhigang Li , Qian Hu , Ning Yuan , Man Zhou , Xiaoxia Xia , Rooksie Noorai , Christopher Saski , Shigui Li , Hong Luo

Horticulture Research ›› 2019, Vol. 6 ›› Issue (1) : 48

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Horticulture Research ›› 2019, Vol. 6 ›› Issue (1) :48 DOI: 10.1038/s41438-019-0130-x
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MicroRNA396-mediated alteration in plant development and salinity stress response in creeping bentgrass
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Abstract

The conserved microRNA396 (miR396) is involved in plant growth, development, and abiotic stress response in multiple plant species through regulating its targets, Growth Regulating Factor (GRF) transcription factor genes. However, the role of miR396 has not yet been characterized in perennial monocot species. In addition, the molecular mechanism of miR396-mediated abiotic stress response remains unclear. To elucidate the role of miR396 in perennial monocot species, we generated transgenic creeping bentgrass ( Agrostis stolonifera) overexpressing Osa-miR396c, a rice miRNA396 gene. Transgenic plants exhibited altered development, including less shoot and root biomass, shorter internodes, smaller leaf area, fewer leaf veins, and epidermis cells per unit area than those of WT controls. In addition, transgenics showed enhanced salt tolerance associated with improved water retention, increased chlorophyll content, cell membrane integrity, and Na+ exclusion during high salinity exposure. Four potential targets of miR396 were identified in creeping bentgrass and up-regulated in response to salt stress. RNA-seq analysis indicates that miR396-mediated salt stress tolerance requires the coordination of stress-related functional proteins (antioxidant enzymes and Na+/H+ antiporter) and regulatory proteins (transcription factors and protein kinases). This study establishes a miR396-associated molecular pathway to connect the upstream regulatory and downstream functional elements, and provides insight into the miRNA-mediated regulatory networks.

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Shuangrong Yuan, Junming Zhao, Zhigang Li, Qian Hu, Ning Yuan, Man Zhou, Xiaoxia Xia, Rooksie Noorai, Christopher Saski, Shigui Li, Hong Luo. MicroRNA396-mediated alteration in plant development and salinity stress response in creeping bentgrass. Horticulture Research, 2019, 6 (1) : 48 DOI:10.1038/s41438-019-0130-x

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References

[1]

Hasegawa, P. M., Bressan, R. A., Zhu, J. & Bohnert, H. J. Plant cellular & molecular responses to high salinity. Annu. Rev. Plant Physiol. Plant Mol. Biol. 51, 463-499 (2000).

[2]

Munns, R. & Tester, M. Mechanisms of salinity tolerance. Annu. Rev. Plant Biol. 59, 651-681 (2008).

[3]

Uozumi, N. & Schroeder, J.I. Ion channels and plant stress: past, present, and future. In Ion Channels and Plant Stress Responses (eds. Demidchik, V., Maathuis, F.) 1-22 (Springer, Berlin, 2010).

[4]

Hauser, F. & Horie, T. A conserved primary salt tolerance mechanism mediated by HKT transporters: a mechanism for sodium exclusion and maintenance of high K+/Na+ ratio in leaves during salinity stress . Plant Cell Environ. 33, 552-565 (2010).

[5]

Blumwald, E. Sodium transport and salt tolerance in plants. Curr. Opin. Cell Biol. 12, 431-434 (2000).

[6]

Zhang, H. X., Hodson, J. N., Williams, J. P. & Blumwald, E. Engineering salt-tolerant Brassica plants: characterization of yield and seed oil quality in transgenic plants with increased vacuolar sodium accumulation. Proc. Natl Acad. Sci. USA 98, 12832-12836 (2001).

[7]

Agarwal, P. K., Shukla, P. S., Gupta, K. & Jha, B. Bioengineering for salinity tolerance in plants: state of the art. Mol. Biotechnol. 54, 102-123 (2013).

[8]

Wu, S. J., Ding, L. & Zhu, J. K. SOS1, a genetic locus essential for salt tolerance and potassium acquisition. Plant Cell 8, 617-627 (1996).

[9]

Quan, R. et al. SCABP8/CBL10, a putative calcium sensor, interacts with the protein kinase SOS2 to protect Arabidopsis shoots from salt stress. Plant Cell 19, 1415-1431 (2007).

[10]

Quintero, F. J. et al. Activation of the plasma membrane Na+/H+ antiporter Salt-Overly-Sensitive 1 (SOS1) by phosphorylation of an auto-inhibitory C-terminal domain . Proc. Natl Acad. Sci. USA 108, 2611-2616 (2011).

[11]

Yang, Q. et al. Overexpression of SOS (Salt Overly Sensitive) genes increases salt tolerance in transgenic Arabidopsis. Mol. Plant 2, 22-31 (2009).

[12]

Ben Ahmed, C., Ben Rouina, B., Sensoy, S., Boukhriss, M. & Ben Abdullah, F. Exogenous proline effects on photosynthetic performance and antioxidant defense system of young olive tree. J. Agric. Food Chem. 58, 4216-4222 (2010).

[13]

Garg, A. K. et al. Trehalose accumulation in rice plants confers high tolerance levels to different abiotic stresses. Proc. Natl Acad. Sci. USA 99, 15898-15903 (2002).

[14]

Sharma, P., Jha, A. B., Dubey, R. S. & Pessarakli, M. Reactive oxygen species, oxidative damage, and antioxidative defense mechanism in plants under stressful conditions. J. Bot., Article 217037. https://doi.org/10.1155/2012/217037 (2012).

[15]

Eltayeb, A. E. et al. Overexpression of monodehydroascorbate reductase in transgenic tobacco confers enhanced tolerance to ozone, salt and polyethylene glycol stresses. Planta 225, 1255-1264 (2007).

[16]

Guan, Z., Chai, T., Zhang, Y., Xu, J. & Wei, W. Enhancement of Cd tolerance in transgenic tobacco plants overexpressing a Cd-induced catalase cDNA. Chemosphere 76, 623-630 (2009).

[17]

Ma, C., Burd, S. & Lers, A. miR408 is involved in abiotic stress responses in Arabidopsis. Plant J. 84, 169-187 (2015).

[18]

Yuan, S. et al. Constitutive expression of rice microRNA528 alters plant development and enhances tolerance to salinity stress and nitrogen starvation in creeping bentgrass. Plant Physiol. 169, 576-593 (2015).

[19]

Kim, J. H., Choi, D. & Kende, H. The AtGRF family of putative transcription factors is involved in leaf and cotyledon growth in Arabidopsis. Plant J. 36, 94-104 (2003).

[20]

Yang, F., Liang, G., Liu, D. & Yu, D. Arabidopsis miR396 mediates the development of leaves and flowers in transgenic tobacco. J. Plant Biol. 52, 475-481 (2009).

[21]

Rodriguez, R. E. et al. Control of cell proliferation in Arabidopsis thaliana by microRNA miR396. Development 137, 103-112 (2010).

[22]

Baucher, M. et al. A role for the miR396/GRF network in specification of organ type during flower development, as supported by ectopic expression of Populus trichocarpa miR396c in transgenic tobacco. Plant Biol. 15, 892-898 (2013).

[23]

Debernardi, J. M. et al. Post-transcriptional control of GRF transcription factors by microRNA miR396 and GIF co-activator affects leaf size and longevity. Plant J. 79, 413-426 (2014).

[24]

Casadevall, R., Rodriguez, R. E., Debernardi, J. M., Palatnik, J. F. & Casati, P. Repression of growth regulating factors by the microRNA396 inhibits cell proliferation by UV-B radiation in Arabidopsis leaves. Plant Cell 25, 3570-3583 (2013).

[25]

Young, M. D., Wakefield, M. J., Smyth, G. K. & Oshlack, A. Method gene ontology analysis for RNA-seq: accounting for selection bias. Genome Biol. 11, R14 (2010).

[26]

Chen, L., Luan, Y. & Zhai, J. Sp-miR396a-5p acts as a stress-responsive genes regulator by conferring tolerance to abiotic stresses and susceptibility to Phytophthora nicotianae infection in transgenic tobacco. Plant Cell Rep. 34, 2013-2025. https://doi.org/10.1007/s00299-015-1847-0. (2015).

[27]

Gao, P. et al. Over-expression of osa-MIR396c decreases salt and alkali stress tolerance. Planta 231, 991-1001 (2010).

[28]

Xiao, H. et al. Functional analysis of the rice AP3 homologue OsMADS16 by RNA interference. Plant Mol. Biol. 52, 957-966 (2003).

[29]

Luo, H., Hu, Q., Nelson, K., Longo, C. & Kausch, A.P. Controlling Transgene Escape in Genetically Modified Grasses. In: Hopkins, A., Wang, Z.Y., Mian, R., Sledge, M., & Barker, R.E. (eds) Molecular Breeding of Forage and Turf. Developments in Plant Breeding, Vol. 11. 245-254 (Springer, Dordrecht, 2004).

[30]

Luo, H. et al. Agrobacterium tumefaciens-mediated creeping bentgrass (Agrostis stolonifera L.) transformation using phosphinothricin selection results in a high frequency of single-copy transgene integration. Plant Cell Rep. 22, 645-652 (2004).

[31]

Li, Z., Baldwin, C. M., Hu, Q., Liu, H. & Luo, H. Heterologous expression of Arabidopsis H-pyrophosphatase enhances salt tolerance in transgenic creeping bentgrass (Agrostis stolonifera L.). Plant Cell Environ. 33, 272-289 (2010).

[32]

Conesa, A. et al. Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21, 3674-3676 (2005).

[33]

Liao, Y., Smyth, G. K. & Shi, W. Feature Counts: an efficient general purpose program for assigning sequence reads to genomic features. Bioinformatics 30, 923-930 (2014).

[34]

Zhou, J. et al. Expression profile of miRNAs in Populus cathayana L. and Salix matsudana Koidz under salt stress. Mol. Biol. Rep. 39, 8645-8654 (2012).

[35]

Qin, Z., Chen, J., Jin, L., Duns, G. J. & Ouyang, P. Differential expression of miRNAs under salt stress in Spartina alterniflora leaf tissues. J. Nanosci. Nanotechnol. 15, 1554-1561 (2015).

[36]

Hare, P. D. & Cress, W. A. Metabolic implications of stress-induced proline accumulation in plants. Plant Growth Regul. 21, 79-102 (1997).

[37]

Kishor, K. P. B. & Sreenivasulu, N. Is proline accumulation per se correlated with stress tolerance or is proline homeostasis a more critical issue?. Plant Cell Environ. 37, 300-311 (2014).

[38]

Debernardi, J. M., Rodriguez, R. E., Mecchia, M. A. & Palatnik, J. F. Functional specialization of the plant miR396 regulatory network through distinct microRNA-target interactions. PLoS Genet. 8, e1002419 (2012).

[39]

Liu, H. et al. OsmiR396d-regulated OsGRFs function in floral organogenesis in rice through binding to their targets OsJMJ706 and OsCR4. Plant Physiol. 165, 160-174 (2014).

[40]

Omidbakhshfard, M. A., Proost, S., Fujikura, U. & Mueller-Roeber, B. Growth-regulating factors (GRFs): a small transcription factor family with important functions in plant biology. Mol. Plant 8, 998-1010 (2015).

[41]

Long, J. A., Moan, E. I., Medford, J. I. & Barton, M. K. A member of the KNOTTED class of homeodomain proteins encoded by the STM gene of Arabidopsis. Nature 379, 66-69 (1996).

[42]

Vollbrecht, E., Reiser, L. & Hake, S. Shoot meristem size is dependent on inbred background and presence of the maize homeobox gene, knotted1. Development 127, 3161-3172 (2000).

[43]

Kuijt, S. J. et al. Interaction between the GROWTH-REGULATING FACTOR and KNOTTED1-LIKE HOMEOBOX families of transcription factors. Plant Physiol. 164, 1952-1966 (2014).

[44]

Osnato, M. et al. Cross talk between the KNOX and ethylene pathways is mediated by intron-binding transcription factors in barley. Plant Physiol. 154, 1616-1632 (2010).

[45]

Bazin, J. et al. miR396 affects mycorrhization and root meristem activity in the legume Medicago truncatula. Plant J. 74, 920-934 (2013).

[46]

An, J. et al. The over-expression of Chrysanthemum crassum CcSOS1 improves the salinity tolerance of chrysanthemum. Mol. Biol. Rep. 41, 4155-4162 (2014).

[47]

Yue, Y., Zhang, M., Zhang, J., Duan, L. & Li, Z. SOS1 gene overexpression increased salt tolerance in transgenic tobacco by maintaining a higher K+/Na+ ratio . Plant Physiol. 169, 255-261 (2012).

[48]

Rubio, F., Gassmann, W. & Schroeder, J. I. Sodium-driven potassium uptake by the plant potassium transporter HKT1 and mutations conferring salt tolerance. Science 270, 1660-1663 (1995).

[49]

Gassmann, W., Rubio, F. & Schroeder, J. I. Alkali cation selectivity of the wheat root high-affinity potassium transporter HKT1. Plant J. 10, 869-882 (1996).

[50]

Ali, Z. et al. TsHKT1;2, a HKT1 homolog from the extremophile Arabidopsis relative Thellungiella salsuginea, shows K+ specificity in the presence of NaCl . Plant Physiol. 158, 1463-1474 (2012).

[51]

Yamaguchi, T., Hamamoto, S. & Uozumi, N. Sodium transport system in plant cells. Front. Plant Sci. 4, 410 (2013).

[52]

Ren, Z. H. et al. A rice quantitative trait locus for salt tolerance encodes a sodium transporter. Nat. Genet. 37, 1141-1146 (2005).

[53]

Wang, X. et al. Expression of TaWRKY44, a wheat WRKY gene, in transgenic tobacco confers multiple abiotic stress tolerances. Front. Plant Sci. 6, 615 (2015).

[54]

Zhao, T. et al. Expression and functional analysis of WRKY transcription factors in Chinese wild hazel, Corylus heterophylla Fisch. PLoS ONE 10, e0135315 (2015).

[55]

Arora, R. et al. MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress. BMC Genom. 8, 242 (2007).

[56]

Akhtar, M. et al. DREB1/CBF transcription factors: their structure, function and role in abiotic stress tolerance in plants. J. Genet. 91, 385-395 (2012).

[57]

Yang, C. Y. et al. MicroRNA396-targeted SHORT VEGETATIVE PHASE is required to repress flowering and is related to the development of abnormal flower symptoms by the Phyllody Symptoms1 Effector. Plant Physiol. 168, 1702-1716 (2015).

[58]

Kuijt, S. J. et al. Interaction between the GROWTH-REGULATING FACTOR and KNOTTED1-LIKE HOMEOBOX families of transcription factors. Plant Physiol. 164, 1952-1966 (2014).

[59]

Kim, J. S. et al. Arabidopsis growth-regulating factor7 functions as a transcriptional repressor of abscisic acid- and osmotic stress-responsive genes, including DREB2A. Plant Cell 24, 3393-3405 (2012).

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