Detecting differential transcript usage across multiple conditions for RNA-seq data based on the smoothed LDA model

Jing LI , Xuejun LIU , Daoqiang ZHANG

Front. Comput. Sci. ›› 2021, Vol. 15 ›› Issue (3) : 153319

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Front. Comput. Sci. ›› 2021, Vol. 15 ›› Issue (3) : 153319 DOI: 10.1007/s11704-020-9348-x
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Detecting differential transcript usage across multiple conditions for RNA-seq data based on the smoothed LDA model

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Jing LI, Xuejun LIU, Daoqiang ZHANG. Detecting differential transcript usage across multiple conditions for RNA-seq data based on the smoothed LDA model. Front. Comput. Sci., 2021, 15(3): 153319 DOI:10.1007/s11704-020-9348-x

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Trapnell C, Roberts A, Goff L, Pertea G, Kim D, Kelley D R, Pimentel H, Salzberg S L, Rinn J L, Pachter L. Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nature Protocols, 2012, 7(3): 562

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