Enhancing L-serine production in Corynebacterium glutamicum based on increasing carbon flow from sucrose to L-serine

Yujie Gao , Xiaomei Zhang , Jian Chen , Yamin Huang , Guoqiang Xu , Xiaojuan Zhang , Hui Li , Jinsong Shi , Zhenghong Xu

Systems Microbiology and Biomanufacturing ›› 2025, Vol. 5 ›› Issue (1) : 421 -431.

PDF
Systems Microbiology and Biomanufacturing ›› 2025, Vol. 5 ›› Issue (1) :421 -431. DOI: 10.1007/s43393-024-00311-6
Original Article
research-article
Enhancing L-serine production in Corynebacterium glutamicum based on increasing carbon flow from sucrose to L-serine
Author information +
History +
PDF

Abstract

L-serine is utilized in various applications across the pharmaceutical and food industry. Corynebacterium glutamicum, a non-pathogenic strain, is extensively used in amino acid production. However, the current titer and productivity of L-serine through direct fermentation are insufficient to meet the demands of industrial production. This shortfall arises from the strain’s inadequacy sucrose utilization, which affects both L-serine productivity and sucrose consumption rate. To solve the problem, this research conducted three strategies to increase the carbon flow from sucrose to L-serine. Initially, ALE was performed using a stress of 300 g/L sucrose based on A36-pDSer, and a biosensor-assisted high-throughput screening platform was utilized to identify the mutants with higher intracellular L-serine concentration. The strain A36-mut achieved 39.0 g/L L-serine titer, marking a notable 25.3% improvement over the parent strain A36 (31.1 g/L). Subsequently, the overexpression of the L-serine exporter serE along with its transcription factor serR in strain A36-mut led to an improvement in the L-serine production, reaching 44.8 g/L. Finally, by optimizing the fed-batch fermentation process, the L-serine titer and productivity were improved to 53.7 g/L and 0.50 g/L/h, respectively. This research presented the highest L-serine titer from sucrose in C. glutamicum to date, offering the possibility for the industrialization production of L-serine by fermentation.

Keywords

L-serine / Biosensor / Adaptive laboratory evolution / L-serine exporter / Corynebacterium glutamicum

Cite this article

Download citation ▾
Yujie Gao, Xiaomei Zhang, Jian Chen, Yamin Huang, Guoqiang Xu, Xiaojuan Zhang, Hui Li, Jinsong Shi, Zhenghong Xu. Enhancing L-serine production in Corynebacterium glutamicum based on increasing carbon flow from sucrose to L-serine. Systems Microbiology and Biomanufacturing, 2025, 5(1): 421-431 DOI:10.1007/s43393-024-00311-6

登录浏览全文

4963

注册一个新账户 忘记密码

References

[1]

Tozlu Ö, Türkez H, Okkay U, Ceylan O, Bayram C, Hacımüftüoğlu A, Mardinoğlu A. Assessment of the neuroprotective potential of D-cycloserine and L-serine in aluminum chloride-induced experimental models of Alzheimer’s disease: in vivo and in vitro studies. Front Nutr. 2022, 9: 981889

[2]

Jeon H, Kim YJ, Hwang SK, Seo J, Mun JY. Restoration of cathepsin D level via L-serine attenuates PPA-induced lysosomal dysfunction in neuronal cells. Int J Mol Sci. 2022, 23(18): 10613

[3]

Handzlik MK, Metallo CM. Sources and sinks of serine in nutrition, health, and disease. Annu Rev Nutr. 2023, 43: 123-51

[4]

Zhang X, Xu G, Shi J, Koffas MAG, Xu Z. Microbial production of L-serine from renewable feedstocks. Trends Biotechnol. 2018, 36(7): 700-12

[5]

Teng Z, Pan X, Liu Y, You J, Zhang H, Zhao Z, Qiao Z, Rao Z. Engineering serine hydroxymethyltransferases for efficient synthesis of L-serine in Escherichia coli. Bioresour Technol. 2024, 393: 130153

[6]

D’Este M, Alvarado-Morales M, Angelidaki I. Amino acids production focusing on fermentation technologies - a review. Biotechnol Adv. 2018, 36(1): 14-25

[7]

Xu G, Zhang X, Xiao W, Shi J, Xu Z. Production of L-serine and its derivative L-cysteine from renewable feedstocks using Corynebacterium glutamicum: advances and perspectives. Crit Rev Biotechnol. 2023:1–14.

[8]

Liu J, Xu JZ, Rao ZM, Zhang WG. Industrial production of L-lysine in Corynebacterium glutamicum: Progress and prospects. Microbiol Res. 2022, 262: 127101

[9]

Sheng Q, Wu XY, Xu X, Tan X, Li Z, Zhang B. Production of L-glutamate family amino acids in Corynebacterium glutamicum: physiological mechanism, genetic modulation, and prospects. Synth Syst Biotechnol. 2021, 6(4): 302-25

[10]

Li Z, Wang Q, Liu H, Wang Y, Zheng Z, Zhang Y, Tan T. Engineering Corynebacterium glutamicum for the efficient production of N-acetylglucosamine. Bioresour Technol. 2023, 390: 129865

[11]

Peters-Wendisch P, Stolz M, Etterich H, Kennerknecht N, Sahm H, Eggeling L. Metabolic engineering of Corynebacterium glutamicum for L-serine production. Appl Environ Microbiol. 2005, 71(11): 7139-44

[12]

Stolz M, Peters-Wendisch P, Etterich H, Gerharz T, Faurie R, Sahm H, Fersterra H, Eggeling L. Reduced folate supply as a key to enhanced L-serine production by Corynebacterium glutamicum. Appl Environ Microbiol. 2007, 73(3): 750-5

[13]

Zhang X, Xu G, Li H, Dou W, Xu Z. Effect of cofactor folate on the growth of Corynebacterium glutamicum SYPS-062 and L-serine accumulation. Appl Biochem Biotechnol. 2014, 173(7): 1607-17

[14]

Zhu Q, Zhang X, Luo Y, Guo W, Xu G, Shi J, Xu Z. L-serine overproduction with minimization of by-product synthesis by engineered Corynebacterium glutamicum. Appl Microbiol Biotechnol. 2015, 99(4): 1665-73

[15]

Guo W, Chen Z, Zhang X, Xu G, Zhang X, Shi J, Xu Z. A novel aceE mutation leading to a better growth profile and a higher L-serine production in a high-yield L-serine-producing Corynebacterium glutamicum strain. J Ind Microbiol Biotechnol. 2016, 43(9): 1293-301

[16]

Zhang X, Zhang X, Xu G, Zhang X, Shi J, Xu Z. Integration of ARTP mutagenesis with biosensor-mediated high-throughput screening to improve L-serine yield in Corynebacterium glutamicum. Appl Microbiol Biotechnol. 2018, 102(14): 5939-51

[17]

Yun J, Zabed HM, Zhang Y, Zhang G, Zhao M, Qi X. Improving tolerance and 1,3-propanediol production of Clostridium butyricum using physical mutagenesis, adaptive evolution and genome shuffling. Bioresour Technol. 2022, 363: 127967

[18]

Godara A, Kao KC. Adaptive laboratory evolution for growth coupled microbial production. World J Microbiol Biotechnol. 2020, 36(11): 175

[19]

Mavrommati M, Daskalaki A, Papanikolaou S, Aggelis G. Adaptive laboratory evolution principles and applications in industrial biotechnology. Biotechnol Adv. 2022, 54: 107795

[20]

Mahr R, Gätgens C, Gätgens J, Polen T, Kalinowski J, Frunzke J. Biosensor-driven adaptive laboratory evolution of L-valine production in Corynebacterium glutamicum. Metab Eng. 2015, 32: 184-94

[21]

Seok JY, Han YH, Yang JS, Yang J, Lim HG, Kim SG, Seo SW, Jung GY. Synthetic biosensor accelerates evolution by rewiring carbon metabolism toward a specific metabolite. Cell Rep. 2021, 36(8): 109589

[22]

Zeng W, Guo L, Xu S, Chen J, Zhou J. High-throughput screening technology in industrial biotechnology. Trends Biotechnol. 2020, 38(8): 888-906

[23]

Gwon DA, Seok JY, Jung GY, Lee JW. Biosensor-assisted adaptive laboratory evolution for violacein production. Int J Mol Sci. 2021;22(12).

[24]

Wendisch VF. Metabolic engineering advances and prospects for amino acid production. Metab Eng. 2020, 58: 17-34

[25]

Yin L, Shi F, Hu X, Chen C, Wang X. Increasing L-isoleucine production in Corynebacterium glutamicum by overexpressing global regulator Lrp and two-component export system BrnFE. J Appl Microbiol. 2013, 114(5): 1369-77

[26]

Lv Q, Hu M, Tian L, Liu F, Wang Q, Xu M, Rao Z. Enhancing L-glutamine production in Corynebacterium glutamicum by rational metabolic engineering combined with a two-stage pH control strategy. Bioresour Technol. 2021, 341: 125799

[27]

Moraskie M, Roshid MHO, O’Connor G, Dikici E, Zingg JM, Deo S, Daunert S. Microbial whole-cell biosensors: current applications, challenges, and future perspectives. Biosens Bioelectron. 2021, 191: 113359

[28]

Sandberg TE, Salazar MJ, Weng LL, Palsson BO, Feist AM. The emergence of adaptive laboratory evolution as an efficient tool for biological discovery and industrial biotechnology. Metab Eng. 2019, 56: 1-16

[29]

Lee S, Kim P. Current status and applications of adaptive laboratory evolution in industrial microorganisms. J Microbiol Biotechnol. 2020, 30(6): 793-803

[30]

Binder S, Schendzielorz G, Stäbler N, Krumbach K, Hoffmann K, Bott M, Eggeling L. A high-throughput approach to identify genomic variants of bacterial metabolite producers at the single-cell level. Genome Biol. 2012, 13(5): R40

[31]

Ding N, Zhou S, Deng Y. Transcription-factor-based biosensor engineering for applications in synthetic biology. ACS Synth Biol. 2021, 10(5): 911-22

[32]

Simic P, Sahm H, Eggeling L. L-threonine export: use of peptides to identify a new translocator from Corynebacterium glutamicum. J Bacteriol. 2001, 183(18): 5317-24

[33]

Zhang X, Gao Y, Chen Z, Xu G, Zhang X, Li H, Shi J, Koffas MAG, Xu Z. High-yield production of L-serine through a novel identified exporter combined with synthetic pathway in Corynebacterium glutamicum. Microb Cell Fact. 2020, 19(1): 115

[34]

Gao Y, Zhang X, Xu G, Zhang X, Li H, Shi J, Xu Z. Enhanced L-serine production by Corynebacterium glutamicum based on novel insights into L-serine exporters. Biotechnol J. 2023:e2300136.

[35]

Zhang XM, Yao LP, Xu GQ, Zhu JF, Zhang XJ, Shi JS, Xu ZH. Enhancement of fructose utilization from sucrose in the cell for improved L-serine production in engineered Corynebacterium glutamicum. Biochem Eng J. 2017, 118: 113-22

Funding

Innovative Research Group Project of the National Natural Science Foundation of China(32171470)

RIGHTS & PERMISSIONS

Jiangnan University

PDF

716

Accesses

0

Citation

Detail

Sections
Recommended

/