[1] Atochina-Vasserman, E.N., Winkler, C., Abramova, H., Schaumann, F., Krug, N., Gow, A.J., Beers, M.F., and Hohlfeld, J.M. (2011). Segmental allergen challenge alters multimeric structure and function of surfactant protein D in humans.
Am J Respir Crit Care Med 183, 856-864 .
10.1164/rccm.201004-0654OC[2] Broillet, M.C. (1999). S-nitrosylation of proteins.
Cell Mol Life Sci 55, 1036-1042 .
10.1007/s000180050354[3] Carvalho-Filho, M.A., Ueno, M., Hirabara, S.M., Seabra, A.B., Carvalheira, J.B., de Oliveira, M.G., Velloso, L.A., Curi, R., and Saad, M.J. (2005). S-nitrosation of the insulin receptor, insulin receptor substrate 1, and protein kinase B/Akt: a novel mechanism of insulin resistance.
Diabetes 54, 959-967 .
10.2337/diabetes.54.4.959[4] Chanvorachote, P., Nimmannit, U., Stehlik, C., Wang, L., Jiang, B.H., Ongpipatanakul, B., and Rojanasakul, Y. (2006). Nitric oxide regulates cell sensitivity to cisplatin-induced apoptosis through S-nitrosylation and inhibition of Bcl-2 ubiquitination
. Cancer Res 66, 6353-6360 .
10.1158/0008-5472.CAN-05-4533[5] Cheah, J.H., Kim, S.F., Hester, L.D., Clancy, K.W., Patterson, S.E., 3rd, Papadopoulos, V., and Snyder, S.H. (2006). NMDA receptor-nitric oxide transmission mediates neuronal iron homeostasis via the GTPase Dexras1.
Neuron 51, 431-440 .
10.1016/j.neuron.2006.07.011[6] Chernorudskiy, A.L., Garcia, A., Eremin, E.V., Shorina, A.S., Kondratieva, E.V., and Gainullin, M.R. (2007). UbiProt: a database of ubiquitylated proteins.
BMC Bioinformatics 8, 126.
10.1186/1471-2105-8-126[7] Chung, K.K., Thomas, B., Li, X., Pletnikova, O., Troncoso, J.C., Marsh, L., Dawson, V.L., and Dawson, T.M. (2004). S-nitrosylation of parkin regulates ubiquitination and compromises parkin's protective function.
Science 304, 1328-1331 .
10.1126/science.1093891[8] Gnad, F., Ren, S., Cox, J., Olsen, J.V., Macek, B., Oroshi, M., and Mann, M. (2007). PHOSIDA (phosphorylation site database): management, structural and evolutionary investigation, and prediction of phosphosites.
Genome Biol 8, R250.
10.1186/gb-2007-8-11-r250[9] Hansen, J.E., Lund, O., Nielsen, J.O., and Brunak, S. (1996). O-GLYCBASE: a revised database of O-glycosylated proteins.
Nucleic Acids Res 24, 248-252 .
10.1093/nar/24.1.248[10] Hara, M.R., Agrawal, N., Kim, S.F., Cascio, M.B., Fujimuro, M., Ozeki, Y., Takahashi, M., Cheah, J.H., Tankou, S.K., Hester, L.D.,
. (2005). S-nitrosylated GAPDH initiates apoptotic cell death by nuclear translocation following Siah1 binding.
Nat Cell Biol 7, 665-674 .
10.1038/ncb1268[11] Hess, D.T., Matsumoto, A., Kim, S.O., Marshall, H.E., and Stamler, J.S. (2005). Protein S-nitrosylation: purview and parameters.
Nat Rev Mol Cell Biol 6, 150-166 .
10.1038/nrm1569[12] Huang da, W., Sherman, B.T., Tan, Q., Kir, J., Liu, D., Bryant, D., Guo, Y., Stephens, R., Baseler, M.W., Lane, H.C.,
. (2007). DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists.
Nucleic Acids Res 35, W169-175 .
[13] Huang, Y., Man, H.Y., Sekine-Aizawa, Y., Han, Y., Juluri, K., Luo, H., Cheah, J., Lowenstein, C., Huganir, R.L., and Snyder, S.H. (2005). S-nitrosylation of N-ethylmaleimide sensitive factor mediates surface expression of AMPA receptors.
Neuron 46, 533-540 .
10.1016/j.neuron.2005.03.028[14] Lane, P., Hao, G., and Gross, S.S. (2001). S-nitrosylation is emerging as a specific and fundamental posttranslational protein modification: head-to-head comparison with O-phosphorylation.
Sci STKE 2001, re1.
10.1126/stke.2001.86.re1[15] Liu, Z., Cao, J., Gao, X., Zhou, Y., Wen, L., Yang, X., Yao, X., Ren, J., and Xue, Y. (2011). CPLA 1.0: an integrated database of protein lysine acetylation.
Nucleic Acids Res 39, D1029-1034 .
10.1093/nar/gkq939[16] Mannick, J.B., Hausladen, A., Liu, L., Hess, D.T., Zeng, M., Miao, Q.X., Kane, L.S., Gow, A.J., and Stamler, J.S. (1999). Fas-induced caspase denitrosylation.
Science 284, 651-654 .
10.1126/science.284.5414.651[17] Marozkina, N.V., Yemen, S., Borowitz, M., Liu, L., Plapp, M., Sun, F., Islam, R., Erdmann-Gilmore, P., Townsend, R.R., Lichti, C.F.,
. (2010). Hsp 70/Hsp 90 organizing protein as a nitrosylation target in cystic fibrosis therapy.
Proc Natl Acad Sci U S A 107, 11393-11398 .
10.1073/pnas.0909128107[18] Mohr, S., Stamler, J.S., and Brune, B. (1996). Posttranslational modification of glyceraldehyde-3-phosphate dehydrogenase by S-nitrosylation and subsequent NADH attachment.
J Biol Chem 271, 4209-4214 .
10.1074/jbc.271.8.4209[19] Molina y Vedia, L., McDonald, B., Reep, B., Brune, B., Di Silvio, M., Billiar, T.R., and Lapetina, E.G. (1992). Nitric oxide-induced S-nitrosylation of glyceraldehyde-3-phosphate dehydrogenase inhibits enzymatic activity and increases endogenous ADP-ribosylation.
J Biol Chem 267, 24929-24932 .
[20] Nakamura, T., Wang, L., Wong, C.C., Scott, F.L., Eckelman, B.P., Han, X., Tzitzilonis, C., Meng, F., Gu, Z., Holland, E.A.,
. (2010). Transnitrosylation of XIAP regulates caspase-dependent neuronal cell death.
Mol Cell 39, 184-195 .
10.1016/j.molcel.2010.07.002[21] Saura, M., Zaragoza, C., McMillan, A., Quick, R.A., Hohenadl, C., Lowenstein, J.M., and Lowenstein, C.J. (1999). An antiviral mechanism of nitric oxide: inhibition of a viral protease.
Immunity 10, 21-28 .
10.1016/S1074-7613(00)80003-5[22] Seth, D., and Stamler, J.S. (2011). The SNO-proteome: causation and classifications.
Curr Opin Chem Biol 15, 129-136 .
10.1016/j.cbpa.2010.10.012[23] Sun, J., Picht, E., Ginsburg, K.S., Bers, D.M., Steenbergen, C., and Murphy, E. (2006). Hypercontractile female hearts exhibit increased S-nitrosylation of the L-type Ca2+ channel alpha1 subunit and reduced ischemia/reperfusion injury.
Circ Res 98, 403-411 .
10.1161/01.RES.0000202707.79018.0a[24] Uys, J.D., Xiong, Y., and Townsend, D.M. (2011). Nitrosative stress-induced S-glutathionylation of protein disulfide isomerase
. Methods Enzymol 490, 321-332 .
10.1016/B978-0-12-385114-7.00018-0