Crystal structures of N-terminal WRKY transcription factors and DNA complexes
Published date: 15 Mar 2020
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Yong ping Xu , Hua Xu , Bo Wang , Xiao Dong Su . Crystal structures of N-terminal WRKY transcription factors and DNA complexes[J]. Protein & Cell, 2020 , 11(3) : 208 -213 . DOI: 10.1007/s13238-019-00670-0
1 |
Agarwal P, Reddy MP, Chikara J (2011) WRKY: its structure,evolutionary relationship, DNA-binding selectivity, role in stress tolerance and development of plants. Mol Biol Rep 38:3883–3896
|
2 |
Berg OG, Winter RB, von Hippel PH (1981) Diffusion-driven mechanisms of protein translocation on nucleic acids. 1. Models and theory. Biochemistry 20:6929–6948
|
3 |
Brand LH, Fischer NM, Harter K,Kohlbacher O, Wanke D (2013) Elucidating the evolutionary conserved DNA-binding specificities of WRKY transcription factors by molecular dynamics and in vitro binding assays. Nucleic Acids Res 41:9764–9778
|
4 |
Cheng X,Zhao Y, Jiang Q,Yang J,Zhao W, Taylor IA, Peng YL, Wang D, Liu J(2019) Structural basis of dimerization and dual W-box DNA recognition by rice WRKY domain. Nucleic Acids Res 47:4308–4318
|
5 |
Ciolkowski I, Wanke D, Birkenbihl RP,Somssich IE (2008) Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function. Plant Mol Biol 68:81–92
|
6 |
de Pater S, Greco V, Pham K, Memelink J, Kijne J (1996) Characterization of a zinc-dependent transcriptional activator from Arabidopsis. Nucleic Acids Res 24:4624–4631
|
7 |
Duan MR, Nan J, Liang YH, Mao P,Lu L, Li L, Wei C, Lai L, Li Y, Su XD (2007) DNA binding mechanism revealed by high resolution crystal structure of Arabidopsis thaliana WRKY1 protein. Nucleic Acids Res 35:1145–1154
|
8 |
Eulgem T,Rushton PJ, Robatzek S, Somssich IE (2000) The WRKY superfamily of plant transcription factors. Trends Plant Sci 5:199–206
|
9 |
Eulgem T, Rushton PJ, Schmelzer E, Hahlbrock K, Somssich IE (1999) Early nuclear events in plant defence signalling: rapid gene activation by WRKY transcription factors. EMBO J 18:4689–4699
|
10 |
Ishiguro S, Nakamura K (1994) Characterization of a Cdna-encoding a novel DNA-binding protein, Spf1, that recognizes Sp8 sequences in the 5’ upstream regions of genes-coding for sporamin and beta-amylase from sweet-potato. Mol Gen Genet 244:563–571
|
11 |
Qiao Z, Li CL, Zhang W (2016) WRKY1 regulates stomatal movement in drought-stressed Arabidopsis thaliana. Plant Mol Biol 91:53–65
|
12 |
Ulker B,Somssich IE (2004) WRKY transcription factors: from DNA binding towards biological function. Curr Opin Plant Biol 7:491–498
|
13 |
Xu H, Shi X, Wang Z, Gao C, Wang C, Wang Y (2017) Transcription factor ThWRKY4 binds to a novel WLS motif and a RAV1A element in addition to the W-box to regulate gene expression. Plant Sci 261:38–49
|
14 |
Yamasaki K, Kigawa T, Inoue M, Tateno M, Yamasaki T,Yabuki T, Aoki M, Seki E, Matsuda T,Tomo Y
|
15 |
Yamasaki K, Kigawa T, Watanabe S, Inoue M, Yamasaki T,Seki M,Shinozaki K, Yokoyama S (2012) Structural basis for sequencespecific DNA recognition by an Arabidopsis WRKY transcription factor. J Biol Chem 287:7683–7691
|
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