[1] Akude, E., Zherebitskaya, E., Chowdhury, S.K., Smith, D.R., Dobrowsky, R.T., and Fernyhough, P. (2011). Diminished superoxide generation is associated with respiratory chain dysfunction and changes in the mitochondrial proteome of sensory neurons from diabetic rats.
Diabetes 60, 288-297 .
10.2337/db10-0818[2] Anello, M., Lupi, R., Spampinato, D., Piro, S., Masini, M., Boggi, U., Del Prato, S., Rabuazzo, A.M., Purrello, F., and Marchetti, P. (2005). Functional and morphological alterations of mitochondria in pancreatic beta cells from type 2 diabetic patients.
Diabetologia 48, 282-289 .
10.1007/s00125-004-1627-9[3] Bantscheff, M., Schirle, M., Sweetman, G., Rick, J., and Kuster, B. (2007). Quantitative mass spectrometry in proteomics: a critical review.
Anal Bioanal Chem 389, 1017-1031 .
10.1007/s00216-007-1486-6[4] Baseler, W.A., Dabkowski, E.R., Williamson, C.L., Croston, T.L., Thapa, D., Powell, M.J., Razunguzwa, T.T., and Hollander, J.M. (2010). Proteomic alterations of distinct mitochondrial subpopulations in the type 1 diabetic heart: contribution of protein import dysfunction.
Am J Physiol Regul Integr Comp Physiol 300, R186-200 .
10.1152/ajpregu.00423.2010[5] Befroy, D.E., Petersen, K.F., Dufour, S., Mason, G.F., de Graaf, R.A., Rothman, D.L., and Shulman, G.I. (2007). Impaired mitochondrial substrate oxidation in muscle of insulin-resistant offspring of type 2 diabetic patients.
Diabetes 56, 1376-1381 .
10.2337/db06-0783[6] Bindokas, V.P., Kuznetsov, A., Sreenan, S., Polonsky, K.S., Roe, M.W., and Philipson, L.H. (2003). Visualizing superoxide production in normal and diabetic rat islets of Langerhans.
J Biol Chem 278, 9796-9801 .
10.1074/jbc.M206913200[7] Boudina, S., Sena, S., Theobald, H., Sheng, X., Wright, J.J., Hu, X.X., Aziz, S., Johnson, J.I., Bugger, H., Zaha, V.G.,
. (2007). Mitochondrial energetics in the heart in obesity-related diabetes: direct evidence for increased uncoupled respiration and activation of uncoupling proteins.
Diabetes 56, 2457-2466 .
10.2337/db07-0481[8] Boushel, R., Gnaiger, E., Schjerling, P., Skovbro, M., Kraunsoe, R., and Dela, F. (2007). Patients with type 2 diabetes have normal mitochondrial function in skeletal muscle.
Diabetologia 50, 790-796 .
10.1007/s00125-007-0594-3[9] Brownlee, M. (2005). The pathobiology of diabetic complications: a unifying mechanism.
Diabetes 54, 1615-1625 .
10.2337/diabetes.54.6.1615[10] Bugger, H., and Abel, E.D. (2010). Mitochondria in the diabetic heart
. Cardiovasc Res 88, 229-240 .
10.1093/cvr/cvq239[11] Bugger, H., Boudina, S., Hu, X.X., Tuinei, J., Zaha, V.G., Theobald, H.A., Yun, U.J., McQueen, A.P., Wayment, B., Litwin, S.E.,
. (2008). Type 1 diabetic akita mouse hearts are insulin sensitive but manifest structurally abnormal mitochondria that remain coupled despite increased uncoupling protein 3.
Diabetes 57, 2924-2932 .
10.2337/db08-0079[12] Bugger, H., Chen, D., Riehle, C., Soto, J., Theobald, H.A., Hu, X.X., Ganesan, B., Weimer, B.C., and Abel, E.D. (2009). Tissue- specific remodeling of the mitochondrial proteome in type 1 diabetic akita mice.
Diabetes 58, 1986-1997 .
10.2337/db09-0259[13] Chan, D.C. (2006). Mitochondria: dynamic organelles in disease, aging, and development.
Cell 125, 1241-1252 .
10.1016/j.cell.2006.06.010[14] Chomentowski, P., Coen, P.M., Radikova, Z., Goodpaster, B.H., and Toledo, F.G. (2011). Skeletal muscle mitochondria in insulin resistance: differences in intermyofibrillar versus subsarcolemmal subpopulations and relationship to metabolic flexibility
. J Clin Endocrinol Metab 96, 494-503 .
10.1210/jc.2010-0822[15] Choo, H.J., Kim, J.H., Kwon, O.B., Lee, C.S., Mun, J.Y., Han, S.S., Yoon, Y.S., Yoon, G., Choi, K.M., and Ko, Y.G. (2006). Mitochondria are impaired in the adipocytes of type 2 diabetic mice.
Diabetologia 49, 784-791 .
10.1007/s00125-006-0170-2[16] Chowdhury, S.K., Smith, D.R., and Fernyhough, P. (2012). The role of aberrant mitochondrial bioenergetics in diabetic neuropathy.
Neurobiol Dis (In Press).
10.1016/j.nbd.2012.03.016[17] Cui, Z., Hou, J., Chen, X., Li, J., Xie, Z., Xue, P., Cai, T., Wu, P., Xu, T., and Yang, F. (2010). The profile of mitochondrial proteins and their phosphorylation signaling network in INS-1 beta cells.
J Proteome Res 9, 2898-2908 .
10.1021/pr100139z[18] D'Hertog, W., Mathieu, C., and Overbergh, L. (2006). Type 1 diabetes: entering the proteomic era.
Expert Rev Proteomics 3, 223-236 .
10.1586/14789450.3.2.223[19] Dabkowski, E.R., Baseler, W.A., Williamson, C.L., Powell, M., Razunguzwa, T.T., Frisbee, J.C., and Hollander, J.M. (2010). Mitochondrial dysfunction in the type 2 diabetic heart is associated with alterations in spatially distinct mitochondrial proteomes.
Am J Physiol Heart Circ Physiol 299, H529-540 .
10.1152/ajpheart.00267.2010[20] Dabkowski, E.R., Williamson, C.L., Bukowski, V.C., Chapman, R.S., Leonard, S.S., Peer, C.J., Callery, P.S., and Hollander, J.M. (2009). Diabetic cardiomyopathy-associated dysfunction in spatially distinct mitochondrial subpopulations.
Am J Physiol Heart Circ Physiol 296, H359-369 .
10.1152/ajpheart.00467.2008[21] Deng, W.J., Nie, S., Dai, J., Wu, J.R., and Zeng, R. (2010). Proteome, phosphoproteome and hydroxyproteome of liver mitochondria in diabetic rats at early pathogenic stages.
Mol Cell Proteomics 9, 110-116 .
10.1074/mcp.M900020-MCP200[22] Duchen, M.R. (2004). Mitochondria in health and disease: perspectives on a new mitochondrial biology.
Mol Aspects Med 25, 365-451 .
10.1016/j.mam.2004.03.001[23] Eyrich, B., Sickmann, A., and Zahedi, R.P. (2011). Catch me if you can: mass spectrometry-based phosphoproteomics and quantification strategies.
Proteomics 11, 554-570 .
10.1002/pmic.201000489[24] Fernyhough, P., Roy Chowdhury, S.K., and Schmidt, R.E. (2010). Mitochondrial stress and the pathogenesis of diabetic neuropathy.
Expert Rev Endocrinol Metab 5, 39-49 .
[25] Forbes, J.M., Coughlan, M.T., and Cooper, M.E. (2008). Oxidative stress as a major culprit in kidney disease in diabetes.
Diabetes 57, 1446-1454 .
10.2337/db08-0057[26] Graier, W.F., Malli, R., and Kostner, G.M. (2009). Mitochondrial protein phosphorylation: instigator or target of lipotoxicity?
Trends Endocrinol Metab 20, 186-193 .
10.1016/j.tem.2009.01.004[27] Greenacre, S.A., and Ischiropoulos, H. (2001). Tyrosine nitration: localisation, quantification, consequences for protein function and signal transduction.
Free Radic Res 34, 541-581 .
10.1080/10715760100300471[28] Gregersen, N., Hansen, J., and Palmfeldt, J. (2012). Mitochondrial proteomics-a tool for the study of metabolic disorders.
J Inherit Metab Dis .
[29] Guilherme, A., Virbasius, J.V., Puri, V., and Czech, M.P. (2008). Adipocyte dysfunctions linking obesity to insulin resistance and type 2 diabetes.
Nat Rev Mol Cell Biol 9, 367-377 .
10.1038/nrm2391[30] Hojlund, K., Wrzesinski, K., Larsen, P.M., Fey, S.J., Roepstorff, P., Handberg, A., Dela, F., Vinten, J., McCormack, J.G., Reynet, C.,
. (2003). Proteome analysis reveals phosphorylation of ATP synthase beta-subunit in human skeletal muscle and proteins with potential roles in type 2 diabetes.
J Biol Chem 278, 10436-10442 .
10.1074/jbc.M212881200[31] Hood, D.A. (2001). Invited Review: contractile activity-induced mitochondrial biogenesis in skeletal muscle.
J Appl Physiol 90, 1137-1157 .
[32] Hu, Y., Suarez, J., Fricovsky, E., Wang, H., Scott, B.T., Trauger, S.A., Han, W., Oyeleye, M.O., and Dillmann, W.H. (2009). Increased enzymatic O-GlcNAcylation of mitochondrial proteins impairs mitochondrial function in cardiac myocytes exposed to high glucose.
J Biol Chem 284, 547-555 .
10.1074/jbc.M808518200[33] Kanwar, M., Chan, P.S., Kern, T.S., and Kowluru, R.A. (2007). Oxidative damage in the retinal mitochondria of diabetic mice: possible protection by superoxide dismutase.
Invest Ophthalmol Vis Sci 48, 3805-3811 .
10.1167/iovs.06-1280[34] Kartha, G.K., Moshal, K.S., Sen, U., Joshua, I.G., Tyagi, N., Steed, M.M., and Tyagi, S.C. (2008). Renal mitochondrial damage and protein modification in type-2 diabetes.
Acta Diabetol 45, 75-81 .
10.1007/s00592-008-0025-z[35] Kelley, D.E., He, J., Menshikova, E.V., and Ritov, V.B. (2002). Dysfunction of mitochondria in human skeletal muscle in type 2 diabetes.
Diabetes 51, 2944-2950 .
10.2337/diabetes.51.10.2944[36] Kim, J.A., Wei, Y., and Sowers, J.R. (2008). Role of mitochondrial dysfunction in insulin resistance.
Circ Res 102, 401-414 .
10.1161/CIRCRESAHA.107.165472[37] Kotronen, A., Seppala-Lindroos, A., Bergholm, R., and Yki-Jarvinen, H. (2008). Tissue specificity of insulin resistance in humans: fat in the liver rather than muscle is associated with features of the metabolic syndrome.
Diabetologia 51, 130-138 .
10.1007/s00125-007-0867-x[38] Lamson, D.W., and Plaza, S.M. (2002). Mitochondrial factors in the pathogenesis of diabetes: a hypothesis for treatment.
Altern Med Rev 7, 94-111 .
[39] Leinninger, G.M., Backus, C., Sastry, A.M., Yi, Y.B., Wang, C.W., and Feldman, E.L. (2006a). Mitochondria in DRG neurons undergo hyperglycemic mediated injury through Bim, Bax and the fission protein Drp1.
Neurobiol Dis 23, 11-22 .
10.1016/j.nbd.2006.01.017[40] Leinninger, G.M., Edwards, J.L., Lipshaw, M.J., and Feldman, E.L. (2006b). Mechanisms of disease: mitochondria as new therapeutic targets in diabetic neuropathy.
Nat Clin Pract Neurol 2, 620-628 .
10.1038/ncpneuro0320[41] Lesnefsky, E.J., Slabe, T.J., Stoll, M.S., Minkler, P.E., and Hoppel, C.L. (2001). Myocardial ischemia selectively depletes cardiolipin in rabbit heart subsarcolemmal mitochondria.
Am J Physiol Heart Circ Physiol 280, H2770-2778 .
[42] Lewis, E.J., and Lewis, J.B. (2003). Treatment of diabetic nephropathy with angiotensin II receptor antagonist.
Clin Exp Nephrol 7, 1-8 .
10.1007/s101570300000[43] Li, J., Cai, T., Wu, P., Cui, Z., Chen, X., Hou, J., Xie, Z., Xue, P., Shi, L., Liu, P.,
. (2009). Proteomic analysis of mitochondria from Caenorhabditis elegans.
Proteomics 9, 4539-4553 .
10.1002/pmic.200900101[44] Lieber, C.S., Leo, M.A., Mak, K.M., Xu, Y., Cao, Q., Ren, C., Ponomarenko, A., and DeCarli, L.M. (2004). Model of nonalcoholic steatohepatitis.
Am J Clin Nutr 79, 502-509 .
[45] Lopez-Sanchez, L.M., Lopez-Pedrera, C., and Rodriguez-Ariza, A. (2012). Proteomics insights into deregulated protein S-nitrosylation and disease.
Expert Rev Proteomics 9, 59-69 .
10.1586/epr.11.74[46] Lowell, B.B., and Shulman, G.I. (2005). Mitochondrial dysfunction and type 2 diabetes.
Science 307, 384-387 .
10.1126/science.1104343[47] Madsen-Bouterse, S.A., and Kowluru, R.A. (2008). Oxidative stress and diabetic retinopathy: pathophysiological mechanisms and treatment perspectives.
Rev Endocr Metab Disord 9, 315-327 .
10.1007/s11154-008-9090-4[48] Maechler, P., Carobbio, S., and Rubi, B. (2006). In beta-cells, mitochondria integrate and generate metabolic signals controlling insulin secretion.
Int J Biochem Cell Biol 38, 696-709 .
10.1016/j.biocel.2005.12.006[49] Maechler, P., Li, N., Casimir, M., Vetterli, L., Frigerio, F., and Brun, T. (2010). Role of mitochondria in beta-cell function and dysfunction.
Adv Exp Med Biol 654, 193-216 .
10.1007/978-90-481-3271-3_9[50] Maechler, P., and Wollheim, C.B. (2001). Mitochondrial function in normal and diabetic beta-cells.
Nature 414, 807-812 .
10.1038/414807a[51] Mariappan, N., Elks, C.M., Sriramula, S., Guggilam, A., Liu, Z., Borkhsenious, O., and Francis, J. (2009). NF-kappaB-induced oxidative stress contributes to mitochondrial and cardiac dysfunction in type II diabetes.
Cardiovasc Res 85, 473-483 .
10.1093/cvr/cvp305[52] Mogensen, M., Sahlin, K., Fernstrom, M., Glintborg, D., Vind, B.F., Beck-Nielsen, H., and Hojlund, K. (2007). Mitochondrial respiration is decreased in skeletal muscle of patients with type 2 diabetes.
Diabetes 56, 1592-1599 .
10.2337/db06-0981[53] Mollica, M.P., Lionetti, L., Crescenzo, R., D'Andrea, E., Ferraro, M., Liverini, G., and Iossa, S. (2006). Heterogeneous bioenergetic behaviour of subsarcolemmal and intermyofibrillar mitochondria in fed and fasted rats.
Cell Mol Life Sci 63, 358-366 .
10.1007/s00018-005-5443-2[54] Mootha, V.K., Lindgren, C.M., Eriksson, K.F., Subramanian, A., Sihag, S., Lehar, J., Puigserver, P., Carlsson, E., Ridderstrale, M., Laurila, E.,
. (2003). PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes.
Nat Genet 34, 267-273 .
10.1038/ng1180[55] Moreira, P.I., and Oliveira, C.R. (2011). Mitochondria as potential targets in antidiabetic therapy.
Handb Exp Pharmacol , 331-356 .
[56] Moreira, P.I., Santos, M.S., Sena, C., Nunes, E., Seica, R., and Oliveira, C.R. (2005a). CoQ10 therapy attenuates amyloid beta-peptide toxicity in brain mitochondria isolated from aged diabetic rats.
Exp Neurol 196, 112-119 .
10.1016/j.expneurol.2005.07.012[57] Moreira, P.I., Santos, M.S., Sena, C., Seica, R., and Oliveira, C.R. (2005b). Insulin protects against amyloid beta-peptide toxicity in brain mitochondria of diabetic rats.
Neurobiol Dis 18, 628-637 .
10.1016/j.nbd.2004.10.017[58] Morino, K., Petersen, K.F., Dufour, S., Befroy, D., Frattini, J., Shatzkes, N., Neschen, S., White, M.F., Bilz, S., Sono, S.,
. (2005). Reduced mitochondrial density and increased IRS-1 serine phosphorylation in muscle of insulin-resistant offspring of type 2 diabetic parents.
J Clin Invest 115, 3587-3593 .
10.1172/JCI25151[59] Munusamy, S., Saba, H., Mitchell, T., Megyesi, J.K., Brock, R.W., and Macmillan-Crow, L.A. (2009). Alteration of renal respiratory Complex-III during experimental type-1 diabetes.
BMC Endocr Disord 9, 2.
10.1186/1472-6823-9-2[60] Nishikawa, T., and Araki, E. (2007). Impact of mitochondrial ROS production in the pathogenesis of diabetes mellitus and its complications.
Antioxid Redox Signal 9, 343-353 .
10.1089/ars.2006.1458[61] Nishikawa, T., Edelstein, D., Du, X.L., Yamagishi, S., Matsumura, T., Kaneda, Y., Yorek, M.A., Beebe, D., Oates, P.J., Hammes, H.P.,
. (2000). Normalizing mitochondrial superoxide production blocks three pathways of hyperglycaemic damage.
Nature 404, 787-790 .
10.1038/35008121[62] Ong, S.E., Blagoev, B., Kratchmarova, I., Kristensen, D.B., Steen, H., Pandey, A., and Mann, M. (2002). Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics.
Mol Cell Proteomics 1, 376-386 .
10.1074/mcp.M200025-MCP200[63] Pagliarini, D.J., Calvo, S.E., Chang, B., Sheth, S.A., Vafai, S.B., Ong, S.E., Walford, G.A., Sugiana, C., Boneh, A., Chen, W.K.,
. (2008). A mitochondrial protein compendium elucidates complex I disease biology.
Cell 134, 112-123 .
10.1016/j.cell.2008.06.016[64] Pagliarini, D.J., and Dixon, J.E. (2006). Mitochondrial modulation: reversible phosphorylation takes center stage?
Trends Biochem Sci 31, 26-34 .
10.1016/j.tibs.2005.11.005[65] Pan, S., Chen, R., Aebersold, R., and Brentnall, T.A. (2010). Mass spectrometry based glycoproteomics-from a proteomics perspective.
Mol Cell Proteomics 10, R110003251.
[66] Patti, M.E., Butte, A.J., Crunkhorn, S., Cusi, K., Berria, R., Kashyap, S., Miyazaki, Y., Kohane, I., Costello, M., Saccone, R.,
. (2003). Coordinated reduction of genes of oxidative metabolism in humans with insulin resistance and diabetes: Potential role of PGC1 and NRF1.
Proc Natl Acad Sci U S A 100, 8466-8471 .
10.1073/pnas.1032913100[67] Patti, M.E., and Corvera, S. (2010). The role of mitochondria in the pathogenesis of type 2 diabetes.
Endocr Rev 31, 364-395 .
10.1210/er.2009-0027[68] Patton, W.F. (2000). A thousand points of light: the application of fluorescence detection technologies to two-dimensional gel electrophoresis and proteomics.
Electrophoresis 21, 1123-1144 .
10.1002/(SICI)1522-2683(20000401)21:6<1123::AID-ELPS1123>3.0.CO;2-E[69] Petersen, K.F., Dufour, S., Befroy, D., Garcia, R., and Shulman, G.I. (2004). Impaired mitochondrial activity in the insulin-resistant offspring of patients with type 2 diabetes.
N Engl J Med 350, 664-671 .
10.1056/NEJMoa031314[70] Phillips, C.A., and Molitch, M.E. (2002). The relationship between glucose control and the development and progression of diabetic nephropathy.
Curr Diab Rep 2, 523-529 .
10.1007/s11892-002-0123-1[71] Rabilloud, T., Chevallet, M., Luche, S., and Lelong, C. (2010). Two-dimensional gel electrophoresis in proteomics: Past, present and future.
J Proteomics 73, 2064-2077 .
10.1016/j.jprot.2010.05.016[72] Rezaul, K., Wu, L., Mayya, V., Hwang, S.I., and Han, D. (2005). A systematic characterization of mitochondrial proteome from human T leukemia cells.
Mol Cell Proteomics 4, 169-181 .
10.1074/mcp.M400115-MCP200[73] Ritov, V.B., Menshikova, E.V., He, J., Ferrell, R.E., Goodpaster, B.H., and Kelley, D.E. (2005). Deficiency of subsarcolemmal mitochondria in obesity and type 2 diabetes.
Diabetes 54, 8-14 .
10.2337/diabetes.54.1.8[74] Rosen, E.D., and Spiegelman, B.M. (2006). Adipocytes as regulators of energy balance and glucose homeostasis.
Nature 444, 847-853 .
10.1038/nature05483[75] Ross, P.L., Huang, Y.N., Marchese, J.N., Williamson, B., Parker, K., Hattan, S., Khainovski, N., Pillai, S., Dey, S., Daniels, S.,
. (2004). Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents.
Mol Cell Proteomics 3, 1154-1169 .
10.1074/mcp.M400129-MCP200[76] Ruiz-Romero, C., and Blanco, F.J. (2009). Mitochondrial proteomics and its application in biomedical research.
Mol Biosyst 5, 1130-1142 .
10.1039/b906296n[77] Santos, J.M., Mohammad, G., Zhong, Q., and Kowluru, R.A. (2010). Diabetic retinopathy, superoxide damage and antioxidants.
Curr Pharm Biotechnol 12, 352-361 .
10.2174/138920111794480507[78] Santos, J.M., Tewari, S., Goldberg, A.F., and Kowluru, R.A. (2011). Mitochondrial biogenesis and the development of diabetic retinopathy.
Free Radic Biol Med 51, 1849-1860 .
10.1016/j.freeradbiomed.2011.08.017[79] Satapati, S., He, T., Inagaki, T., Potthoff, M., Merritt, M.E., Esser, V., Mangelsdorf, D.J., Kliewer, S.A., Browning, J.D., and Burgess, S.C. (2008). Partial resistance to peroxisome proliferator-activated receptor-alpha agonists in ZDF rats is associated with defective hepatic mitochondrial metabolism.
Diabetes 57, 2012-2021 .
10.2337/db08-0226[80] Schmeichel, A.M., Schmelzer, J.D., and Low, P.A. (2003). Oxidative injury and apoptosis of dorsal root ganglion neurons in chronic experimental diabetic neuropathy.
Diabetes 52, 165-171 .
10.2337/diabetes.52.1.165[81] Shen, X., Zheng, S., Thongboonkerd, V., Xu, M., Pierce, W.M., Jr., Klein, J.B., and Epstein, P.N. (2004). Cardiac mitochondrial damage and biogenesis in a chronic model of type 1 diabetes.
Am J Physiol Endocrinol Metab 287, E896-905 .
10.1152/ajpendo.00047.2004[82] Sivitz, W.I., and Yorek, M.A. (2009). Mitochondrial dysfunction in diabetes: from molecular mechanisms to functional significance and therapeutic opportunities.
Antioxid Redox Signal 12, 537-577 .
10.1089/ars.2009.2531[83] Sparre, T., Larsen, M.R., Heding, P.E., Karlsen, A.E., Jensen, O.N., and Pociot, F. (2005). Unraveling the pathogenesis of type 1 diabetes with proteomics: present and future directions.
Mol Cell Proteomics 4, 441-457 .
10.1074/mcp.R500002-MCP200[84] Suh, J.H., Heath, S.H., and Hagen, T.M. (2003). Two subpopulations of mitochondria in the aging rat heart display heterogenous levels of oxidative stress.
Free Radic Biol Med 35, 1064-1072 .
10.1016/S0891-5849(03)00468-4[85] Suzuki, Y., Atsumi, Y., Matsuoka, K., Nishimaki, K., Ohta, S., Taniyama, M., and Muramatsu, T. (2005). Mitochondrial tRNA(Leu(UUR)) mutation at position 3243 detected in patients with type 1 diabetes.
Diabetes Res Clin Pract 67, 92-94 .
10.1016/j.diabres.2004.09.010[86] Taylor, S.W., Fahy, E., Zhang, B., Glenn, G.M., Warnock, D.E., Wiley, S., Murphy, A.N., Gaucher, S.P., Capaldi, R.A., Gibson, B.W.,
. (2003). Characterization of the human heart mitochondrial proteome.
Nat Biotechnol 21, 281-286 .
10.1038/nbt793[87] Tewari, S., Santos, J.M., and Kowluru, R.A. (2012). Damaged mitochondrial DNA replication system and the development of diabetic retinopathy.
Antioxid Redox Signal 17, 492-504 .
10.1089/ars.2011.4333[88] Thomson, M. (2002). Evidence of undiscovered cell regulatory mechanisms: phosphoproteins and protein kinases in mitochondria.
Cell Mol Life Sci 59, 213-219 .
10.1007/s00018-002-8417-7[89] Trudeau, K., Molina, A.J., Guo, W., and Roy, S. (2010). High glucose disrupts mitochondrial morphology in retinal endothelial cells: implications for diabetic retinopathy.
Am J Pathol 177, 447-455 .
10.2353/ajpath.2010.091029[90] Turko, I.V., Li, L., Aulak, K.S., Stuehr, D.J., Chang, J.Y., and Murad, F. (2003). Protein tyrosine nitration in the mitochondria from diabetic mouse heart. Implications to dysfunctional mitochondria in diabetes.
J Biol Chem 278, 33972-33977 .
10.1074/jbc.M303734200[91] Turko, I.V., and Murad, F. (2003). Quantitative protein profiling in heart mitochondria from diabetic rats.
J Biol Chem 278, 35844-35849 .
10.1074/jbc.M303139200[92] Turner, N., and Heilbronn, L.K. (2008). Is mitochondrial dysfunction a cause of insulin resistance?
Trends Endocrinol Metab 19, 324-330 .
10.1016/j.tem.2008.08.001[93] Verkhratsky, A., and Fernyhough, P. (2008). Mitochondrial malfunction and Ca2+ dyshomeostasis drive neuronal pathology in diabetes.
Cell Calcium 44, 112-122 .
10.1016/j.ceca.2007.11.010[94] Vial, G., Dubouchaud, H., Couturier, K., Cottet-Rousselle, C., Taleux, N., Athias, A., Galinier, A., Casteilla, L., and Leverve, X.M. (2010). Effects of a high-fat diet on energy metabolism and ROS production in rat liver.
J Hepatol 54, 348-356 .
10.1016/j.jhep.2010.06.044[95] Wallace, D.C. (1999). Mitochondrial diseases in man and mouse.
Science 283, 1482-1488 .
10.1126/science.283.5407.1482[96] Wang, Y., Peng, F., Tong, W., Sun, H., Xu, N., and Liu, S. (2010). The nitrated proteome in heart mitochondria of the db/db mouse model: characterization of nitrated tyrosine residues in SCOT.
J Proteome Res 9, 4254-4263 .
10.1021/pr100349g[97] Whiting, D.R., Guariguata, L., Weil, C., and Shaw, J. (2011). IDF diabetes atlas: global estimates of the prevalence of diabetes for 2011 and 2030.
Diabetes Res Clin Pract 94, 311-321 .
10.1016/j.diabres.2011.10.029[98] Wiederkehr, A., and Wollheim, C.B. (2006). Minireview: implication of mitochondria in insulin secretion and action.
Endocrinology 147, 2643-2649 .
10.1210/en.2006-0057[99] Wilson-Fritch, L., Nicoloro, S., Chouinard, M., Lazar, M.A., Chui, P.C., Leszyk, J., Straubhaar, J., Czech, M.P., and Corvera, S. (2004). Mitochondrial remodeling in adipose tissue associated with obesity and treatment with rosiglitazone.
J Clin Invest 114, 1281-1289 .
[100] Yu, T., Sheu, S.S., Robotham, J.L., and Yoon, Y. (2008). Mitochondrial fission mediates high glucose-induced cell death through elevated production of reactive oxygen species.
Cardiovasc Res 79, 341-351 .
10.1093/cvr/cvn104[101] Zhu, W., Smith, J.W., and Huang, C.M. (2010). Mass spectrometry- based label-free quantitative proteomics.
J Biomed Biotechnol 2010, 840518.
10.1155/2010/840518[102] Zimmet, P., Alberti, K.G., and Shaw, J. (2001). Global and societal implications of the diabetes epidemic.
Nature 414, 782-787 .
10.1038/414782a[103] Zischka, H., Weber, G., Weber, P.J., Posch, A., Braun, R.J., Buhringer, D., Schneider, U., Nissum, M., Meitinger, T., Ueffing, M.,
. (2003). Improved proteome analysis of Saccharomyces cerevisiae mitochondria by free-flow electrophoresis.
Proteomics 3, 906-916 .
10.1002/pmic.200300376