OVERVIEW OF THE HIPPO PATHWAY
Tissue homeostasis is vital for the normal development and physiology of multicellular organisms. Best characterized in
Drosophila, the Hippo signaling pathway is an evolutionarily conserved pathway for organ size control and tumor suppression in metazoans (
Edgar, 2006;
Harvey and Tapon, 2007;
Pan, 2007;
Badouel et al., 2009;
Oh and Irvine, 2010;
Zhao et al., 2010a). The core components of this tumor suppressor pathway were identified through mosaic genetic screens for overgrowth mutants in
Drosophila. These include the Ste20 family kinase Hippo (Hpo), the WW domain-containing adaptor protein Salvador (Sav), the NDR family protein kinase Warts (Wts), and the NDR family kinase activator Mats (
Justice et al., 1995;
Xu et al., 1995;
Kango-Singh et al., 2002;
Tapon et al., 2002;
Harvey et al., 2003;
Wu et al., 2003;
Lai et al., 2005) (Fig. 1).
These four tumor suppressors form two heterodimeric kinase complexes: Hpo-Sav and Wts-Mats. The activation of Hpo requires autophosphorylation of its activation loop in the kinase domain. Hpo binds Sav directly and promotes Sav phosphorylation. The Hpo-Sav complex phosphorylates both Wts and Mats, therefore promotes autophosphorylation of Wts in its activation loop and further activates the Wts-Mats complex by strengthening their association. The activated Wts-Mats complex in turn phosphorylates the transcriptional coactivator Yorki (Yki), which then binds to 14-3-3 proteins, resulting in its cytoplasmic sequestration and inactivation (
Huang et al., 2005;
Dong et al., 2007;
Zhao et al., 2007;
Oh and Irvine, 2008;
Ren et al., 2010). When the Hippo pathway is inactivated, Yki is dephosphorylated and translocates to the nucleus. Because of lacking a DNA binding domain, Yki has to interact with other transcription factors for gene expression regulation. Scalloped (Sd) is the first transcription factor (which contains a sequence-specific DNA binding domain) identified to form a functional, heterodimeric transcription factor with Yki (
Wu et al., 2008). The Yki-Sd hybrid transcription factor mediates the transcription of Hippo-responsive genes, such as the cell cycle gene
cyclin E, the anti-apoptotic gene
Diap1, and the microRNA
Bantam, thereby promoting cell growth and proliferation and inhibiting apoptosis (
Nolo et al., 2006;
Thompson and Cohen, 2006).
The upstream regulators of the Hippo pathway are less understood. Over the past few years, additional tumor suppressor genes in
Drosophila have been linked to Hippo signaling and have unveiled an intricate upstream regulatory scheme of this pathway (
Grusche et al., 2010). These include two FERM domain-containing cytoskeletal proteins, Expanded (Ex) and Merlin (Mer), and the WW- and C2-domain-containing protein Kibra (
Baumgartner et al., 2010;
Genevet et al., 2010;
Yu et al., 2010) (Fig. 1). These apical membrane-associated, cytoplasmic proteins have been suggested to form a functional complex and regulate some components of the Hippo pathway. The Ex-Mer-Kibra complex or subcomplexes may activate Hpo-Sav through direct interactions. The atypical cadherin Fat (Ft) and the apical transmembrane protein Crumbs (Crb) function as tumor suppressors and have been implicated as potential cell surface receptors for Hippo signaling (
Grzeschik et al., 2010;
Ling et al., 2010;
Robinson et al., 2010). Crb and Ex directly bind to each other, linking a transmembrane protein to an apical component of the Hippo pathway.
The Hippo pathway is highly conserved in mammals (
Edgar, 2006;
Harvey and Tapon, 2007;
Pan, 2007;
Reddy and Irvine, 2008;
Zeng and Hong, 2008;
Zhao et al., 2008a,
2010a;
Zhang et al., 2009b) (Fig. 1). All of its core components in
Drosophila have mammalian homologs, including MST1/2 for Hpo, WW45 for Sav, LATS1/2 for Wts, MOB1 for Mats, and YAP/TAZ for Yki. Expression of human MST2, LATS1, MOB1 and YAP proteins in fly functionally rescues the phenotypes of the corresponding
Drosophila mutants, indicating that these genes are functionally conserved through evolution (
Tao et al., 1999;
Wu et al., 2003;
Huang et al., 2005;
Lai et al., 2005;
Dong et al., 2007;
Zhao et al., 2007;
Wu et al., 2008). TEAD is the mammalian homolog of Sd and form functional, hybrid transcription factors with YAP/TAZ (
Cao et al., 2008;
Ota and Sasaki, 2008;
Wu et al., 2008;
Zhao et al., 2008b). The human or mouse genome each encodes four closely related TEAD proteins, TEAD1–4. When the mammalian Hippo pathway is activated, the MST-WW45 complex phosphorylates and activates the LATS-MOB1 complex. The activated LATS-MOB1 complex phosphorylates YAP and promotes its association with 14-3-3 proteins and cytoplasmic retention, thus preventing the formation of the YAP-TEAD hybrid transcription factors. Moreover, phosphorylation of YAP by LATS promotes its subsequent phosphorylation by CK1δ/ε (
Zhao et al., 2010b). The hyperphosphorylated YAP is recognized and ubiquitinated by the SCF
βTRCP E3 ligase, leading to YAP degradation. As in
Drosophila, when the Hippo pathway is turned off in mammals, YAP translocates to the nucleus, where it forms functional, heterodimeric transcription factors with TEAD and mediates the expression of pro-proliferative genes.
Homologs of the upstream components in the
Drosophila Hippo pathway exist in mammals, including FRMD6 for Ex, NF2 for Mer, KIBRA for Kibra, and Fat4 (Ft4) for Fat (
Grusche et al., 2010). It remains to be demonstrated, however, whether these proteins indeed regulate Hippo signaling in mammals. Moreover, the target genes of the mammalian Hippo pathway are not identical as those found in the fly. So far, only the connective tissue growth factor (CTGF) has been shown to be a direct target gene induced by YAP-TEAD to promote tissue overgrowth (
Zhao et al., 2007). YAP and TAZ also interact with other transcription factors to mediate Hippo signaling (
Hao et al., 2008;
Varelas et al., 2008;
Zhao et al., 2008b;
Alarcón et al., 2009;
Zhang et al., 2009a;
Oh and Irvine, 2010). Thus, the Hippo pathway in mammals is much more complex, with built-in redundancy to ensure tissue homeostasis. In addition, distinct mechanisms may exist to control the organ-specific tissue growth.
The Hippo signaling pathway suppresses tumor formation. Dysregulation of the Hippo pathway has been implicated in human tumorigenesis. Mutations of the pathway components, such as NF2, WW45 and MOB1, have been linked to several types of human cancers (
Tapon et al., 2002;
Lai et al., 2005;
Asthagiri et al., 2009). Downregulation of MST1/2, LATS1/2 and MOB1 has been observed in human sarcomas and various cancers (
Hisaoka et al., 2002;
Jiménez-Velasco et al., 2005;
Takahashi et al., 2005;
Kosaka et al., 2007;
Minoo et al., 2007;
Seidel et al., 2007). The main output of the Hippo pathway is to suppress the function of YAP by regulating its nuclear translocation and stability. YAP has been reported as a candidate oncogene in the human chromosome 11q22 amplicon, which is amplified in human hepatocellular carcinomas (HCC) and breast cancers (
Overholtzer et al., 2006;
Zender et al., 2006). The YAP protein is frequently overexpressed in several human cancers (
Overholtzer et al., 2006;
Zender et al., 2006;
Zhao et al., 2007;
Steinhardt et al., 2008;
Liu et al., 2010).
The TEAD proteins are major partners of YAP and are required for the YAP-mediated gene expression program that promotes cell proliferation and inhibits apoptosis (
Zhao et al., 2008b). Thus, understanding how TEAD interacts with YAP will provide insights into how the Hippo pathway regulates the YAP-TEAD transcription factors and may lead to strategies that control the oncogenic activity of YAP in tumor cells. In this review, I summarize the biochemical and structural data on the function and regulation of the TEAD-YAP hybrid transcription factor, and propose a model to explain how YAP phosphorylation might differentially regulate its binding to 14-3-3 or TEAD.
STRUCTURES OF YAP WW DOMAINS AND TEAD DNA BINDING DOMAIN
Human YAP protein contains an N-terminal TEAD binding domain (TBD), two WW domains, and a C-terminal acidic transactivation domain (Fig. 2A). The WW domain consists of about 30 amino acids with two highly conserved tryptophan residues. Similar to SH3 domains, WW domains are protein-interacting modules frequently found in diverse, intracellular signaling proteins, and bind to proline-rich motifs with dissociation constants in the µM range. The structure of one of the WW domains of YAP in complex with a PPXY motif-containing peptide was determined first (
Macias et al., 1996). It contains a β-sheet with three anti-parallel strands. The PPXY peptide binds on the concave side of the β-sheet. The structure nicely explains the specificity of the YAP WW domain toward PPXY motifs.
The role of WW domains in YAP appears to be complicated, however. They are required for both cytoplasmic retention and transcriptional activity of YAP (
Oh and Irvine, 2010;
Zhao et al., 2010a). On the one hand, the WW domains of YAP bind to PPXY motifs in LATS, enabling efficient LATS-mediated phosphorylation of YAP and its cytoplasmic retention (
Hao et al., 2008;
Oka et al., 2008). On the other hand, the WW domains of YAP interact with PPXY-containing transcription factors in the nucleus to promote gene expression in a cell-type-dependent manner (
Zhao et al., 2009). Finally, YAP has an N-terminal proline-rich region (Fig. 2A). It will be interesting to test whether that this N-terminal region of YAP binds to its own WW domains intramolecularly to autoinhibit the function of WW domains.
All four human TEAD proteins have an N-terminal TEA DNA binding domain and a C-terminal YAP binding domain (YBD). The structure of the TEA DNA binding domain of TEAD proteins was determined (
Anbanandam et al., 2006). It consists of a three-helix bundle with a homeodomain fold. Based on biochemical and NMR studies, it has been suggested that the TEA domain specifically recognizes the promoter regions of its target genes through interactions between its C-terminal H3 helix and the major groove of DNA.
STRUCTURES OF THE YAP-TEAD INTERACTION
The YAP-TEAD heterodimeric transcription factor represents the first well-characterized hybrid transcription system. TEAD provides sequence-specific DNA binding to the promoters of the target genes while the YAP transactivation domain helps to recruit other components of the transcriptional machinery to initiate gene transcription. This elegant system requires the cooperativity between YAP and TEAD for function and increases the complexity of regulation by other cellular partners. Recent structural studies have revealed the interactions between YAP and TEAD in atomic details (
Chen et al., 2010;
Li et al., 2010;
Tian et al., 2010).
The crystal structure of the YAP binding domain (YBD) of human TEAD2 showed that the molecule adopted an immunoglobulin (IgG)-like fold with two β-sheets packing against each other to form a β-sandwich (Fig. 2). One β-sheet contains five anti-parallel strands, including β1, β2, β5, β8 and β9, while the other contains seven parallel and anti-parallel strands, including β3, β4, β6, β7, and β10–12. In addition to the two main β sheets, TEAD2 YBD contains two helix-turn-helix motifs that are absent in the IgG fold. One helix-turn-helix motif consists of αA and αB, and connects β3 and β4. This motif, along with the β2–β3 loop, encircles the C-terminal β12 strand, forming an unusual pseudo-knot structure. The second helix-turn-helix motif consists of αC and αD, and connects β9 and β10.
The crystal structures of two TEAD-YAP complexes have also been solved, including human TEAD1 YBD bound to human YAP TBD, and mouse TEAD4 YBD bound to mouse YAP TBD. In the two TEAD-YAP complexes, the structures of TEAD YBD are highly similar to that of TEAD2 YBD in the absence of YAP (Fig. 2), indicating that YAP binds to a preformed binding pocket on TEAD and does not induce substantial conformational changes of TEAD. In both cases, YAP TBD occupies very similar positions, wrapping around an extended surface on TEAD and forming multiple contacts between the main chain amides and side chains of residues in helices αA, αC and αD, and strands β3, β4, β7, β11 and β12 (Fig. 2).
In the hTEAD1-YAP structure, there are three interfaces between TEAD and YAP. In interface 1, the N-terminal β-strand of YAP forms an edge-on interaction with β7 of TEAD. Interface 2 is formed by α1 of YAP nestling in the hydrophobic groove between helices αC and αD of TEAD. Interface 3 lies between the α2 region of YAP and a pocket formed by helices αA and αD, and strands β3, β4, β11 and β12 of TEAD. The mTEAD4-YAP structure reveals that the proteins interact through the two latter interfaces. The edge-on interaction between TEAD1 β7 and the N-terminal β1 of the YAP TBD is absent.
Based on mutagenesis data, interfaces 1 and 2 are not important for YAP binding because mutations of residues in these interfaces have little effect on the TEAD-YAP interaction. For example, a YAP fragment that lacks strand β1 (interface 1) and helix α1 (interface 2) still binds to TEAD. By contrast, mutations of the residues at interface 3 dramatically weaken or abolish the TEAD-YAP interaction, indicating that this interface contributes most of the binding energy between TEAD and YAP (Fig. 3). A rare eye disease-causing mutation, Y421H in TEAD1, that is known to disrupt the TEAD-YAP interaction is located at interface 3 (
Kitagawa, 2007). TEAD Y421 forms a hydrogen bond with YAP S94, mutation of which also disrupts the TEAD-YAP interaction. Furthermore, among all structure-based mutants of TEAD, only 12 mutants lose binding to YAP, and they are located at interface 3 (Fig. 3A). Correspondingly, mutations of residues in the α2 region of YAP, which lie at interface 3, diminish TEAD binding. Collectively, interface 3 provides a major anchoring point for YAP binding to TEAD and likely contributes most of the binding energy between the two proteins.
Given the relatively small energetic contributions from interfaces 1 and 2, why then do TEAD proteins use such extensive interfaces to interact with YAP? I envision two non-exclusive possibilities. In the first possibility, these weak binding interfaces might contribute to the binding specificities between YAP/TAZ and TEAD1–4 proteins. For example, a PXXΦP motif in the loop connecting α1 and α2 of YAP is important for TEAD4 binding and for the transforming activity of YAP. However, this PXXΦP motif is not conserved in TAZ and is obviously not involved in mediating TAZ binding to TEAD proteins. Therefore, the extensive interface between YAP and TEAD affords an opportunity to fine-tune the binding specificity among the various YAP/TAZ and TEAD homologs. In the second possibility, interfaces 1 and 2 might allow TEAD proteins to disfavor certain residues at key positions in potential ligands, thus contributing to ligand specificity through negative selection. For example, proteins with short motifs that resemble the YAP sequence that binds at interface 3 may contain residues that generate destabilizing interactions at interfaces 1 and 2. These proteins will not bind to TEAD. This type of negative selection has been observed in other protein-protein interactions, such as the interaction among histone binding modules and histone tails (
Couture et al., 2007).
Regardless of the reason, the fact that interface 3 contributes most of the binding energy between YAP and TEAD suggests a feasible strategy for disrupting the YAP-TEAD interaction with small molecules. TEAD has a conspicuous, preexisting surface pocket at this interface. Chemical compounds that bind to this pocket may disrupt the YAP-TEAD interactions. These compounds may kill cancer cells through blocking the YAP-dependent pro-proliferative and pro-survival gene expression program.
REGULATION OF THE YAP-TEAD INTERACTION BY PHOSPHORYLATION
LATS directly phosphorylates YAP at five HXRXXS consensus sites both in vitro and in vivo, including S61, S109, S127, S164 and S397 (
Oh and Irvine, 2009;
Zhao et al., 2009,
2010b). Phosphorylation at S127 creates a 14-3-3 binding site with the consensus of RXXpSXP. Binding of 14-3-3 to this site leads to cytoplasmic retention of YAP and its spatial separation from TEAD (
Zhao et al., 2007;
Oh and Irvine, 2008). Phosphorylation at S397 of YAP promotes the subsequent phosphorylation at S400 and possibly S403 by CK1, thus creating a phosphodegron with the consensus of DpSGXpS (
Zhao et al., 2010b). This phosphodegron is recognized by βTRCP, leading to the polyubiquitination of YAP by SCF
βTRCP and its eventually degradation by the proteosome. The Hippo pathway thus regulates YAP through two mechanisms, cytoplasmic retention and ubiquitin-dependent proteolysis, both of which require phosphorylation of YAP at specific sites.
The mechanism by which 14-3-3 retains phospho-YAP in the cytoplasm is unclear at present. Again, several possible models exist. In the first model, 14-3-3 binding to YAP prevents TEAD from binding YAP by shielding the TEAD binding domain or creating steric hindrance or both. Along this vein, the 14-3-3 binding site S127 is in close proximity to YAP TBD (Fig. 2A). Furthermore, 14-3-3 exists as dimers and each 14-3-3 dimer has two binding sites for phospho-serine-containing peptides. It has been proposed that one 14-3-3 monomer binds to an optimal phospho-serine site as a gatekeeper and the other monomer binds to an adjacent, suboptimal phospho-serine site (
Yaffe, 2002). This bivalent binding mode between 14-3-3 and phospho-serine containing proteins greatly enhances their binding affinities and is likely to induce conformational changes of the proteins to mediate their biological function. Because YAP is phosphorylated at multiple sites, simultaneous engagement of two phospho-serine residues by a 14-3-3 dimer might physically shield YAP TBD away from TEAD or stabilize a conformation of YAP TBD (which is natively unfolded based on NMR data) that is incompatible for TEAD binding.
In the second model, 14-3-3 does not prevent TEAD from binding to phosphorylated YAP. The cytoplasmic retention of phospho-YAP is the result of a delicate balance between dynamic nuclear import and export. YAP does not have a nuclear localization signal (NLS) and needs to bind TEAD (which has an NLS) for nuclear import. 14-3-3 binding to phospho-YAP may shield the NLS of TEAD. Moreover, YAP has several putative nuclear export signals (NES). Phosphorylation of YAP may promote its nuclear export by Crm1 (
Ren et al., 2010). 14-3-3 also contains an NES and may further enhance the nuclear export of phospho-YAP. The diminished nuclear import or enhanced nuclear export or both can explain the cytoplasmic retention of phospho-YAP by 14-3-3.
CONCLUSIONS
The evolutionarily conserved Hippo pathway controls tissue homeostasis in multicellular organisms by restricting cell proliferation and promoting cell death. Malfunction of the Hippo pathway results in hyperplasia and cancer. The YAP-TEAD hybrid transcription factors are key downstream effectors of the Hippo pathway. In particular, the YAP-TEAD interaction is tightly regulated through YAP phosphorylation that is mediated by a kinase cascade in this pathway. Structural studies of the YAP-TEAD interaction have revealed the atomic details of this interaction and suggested a strategy for targeting this interaction with small molecules. How the YAP-TEAD interaction is regulated by phosphorylation and how 14-3-3 retains phospho-YAP in the cytoplasm remain significant, open questions in this field, however. Future structural and biochemical studies aimed at addressing these questions will undoubtedly advance our understanding of the molecular inner workings of this important tumor suppressor pathway and reveal nodes in this pathway that are potential points of pharmaceutical intervention.
Higher Education Press and Springer-Verlag Berlin Heidelberg 2010