CcpA promotes Staphylococcus aureus virulence by directly controlling staphyloxanthin production

Xian Chen , Huagang Peng , Xiancai Rao , Yi Yang , Keting Zhu , Zhen Hu , Shu Li , Xiaonan Huang , Feng Lin , Jianghong Wu , Weilong Shang , Renjie Zhou , Yifan Rao

mLife ›› 2025, Vol. 4 ›› Issue (6) : 651 -663.

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mLife ›› 2025, Vol. 4 ›› Issue (6) :651 -663. DOI: 10.1002/mlf2.70040
ORIGINAL RESEARCH
CcpA promotes Staphylococcus aureus virulence by directly controlling staphyloxanthin production
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Abstract

Staphylococcus aureus is a notorious opportunistic pathogen with remarkable adaptability, enabling it to infect virtually every human tissue. Staphyloxanthin (STX), a critical virulence factor, contributes to S. aureus oxidative damage. However, the regulatory mechanism of STX production is incompletely understood. This study provides mechanistic insights into the role of catabolite control protein A (CcpA) in STX production. ccpA deletion considerably reduced STX yield in S. aureus strains with diverse genetic lineages. Western blot showed that CcpA inactivation did not alter SigB expression levels in S. aureus. Gene reporter and electrophoretic mobility shift assays revealed the direct control of CcpA on the expression of the crtOPQMN operon, which encodes enzymes for step-wise STX biosynthesis. Moreover, CcpA deficiency remarkably impaired bacterial tolerance to H2O2-mediated killing, decreased survival in whole-blood treatment, and diminished persistence in macrophages. In mouse bacteremia and skin abscess models, CcpA was shown to enhance S. aureus virulence. Notably, inhibition of CcpA with Ag+ synergized with vancomycin to combat vancomycin-intermediate S. aureus infections in vivo. Our findings establish CcpA as a SigB-independent regulator of STX production, suggesting that targeting CcpA could be a promising antibiotic synergistic strategy for the management of multidrug-resistant S. aureus infections.

Keywords

catabolite control protein A / crt operon / pathogenicity / pigmentation / Staphylococcus aureus

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Xian Chen, Huagang Peng, Xiancai Rao, Yi Yang, Keting Zhu, Zhen Hu, Shu Li, Xiaonan Huang, Feng Lin, Jianghong Wu, Weilong Shang, Renjie Zhou, Yifan Rao. CcpA promotes Staphylococcus aureus virulence by directly controlling staphyloxanthin production. mLife, 2025, 4(6): 651-663 DOI:10.1002/mlf2.70040

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References

[1]

Tong SYC, Davis JS, Eichenberger E, Holland TL, Fowler Jr. VG. Staphylococcus aureus infections: epidemiology, pathophysiology, clinical manifestations, and management. Clin Microbiol Rev. 2015; 28: 603–661.

[2]

IHME Pathogen Core Group. Global burden associated with 85 pathogens in 2019: a systematic analysis for the Global Burden of Disease Study 2019. Lancet Infect Dis. 2024; 24: 868–895.

[3]

Bochart RM, Armantrout K, Crank H, Tonelli R, Shriver-Munsch C, Swanson T, et al. Identification of vancomycin resistance in methicillin-resistant Staphylococcus aureus in two macaque species and decolonization and long-term prevention of recolonization in Cynomolgus Macaques (Macaca fascicularis). Front Immunol. 2023; 14:1244637.

[4]

Crosby HA, Tiwari N, Kwiecinski JM, Xu Z, Dykstra A, Jenul C, et al. The Staphylococcus aureus ArlRS two-component system regulates virulence factor expression through MgrA. Mol Microbiol. 2020; 113: 103–122.

[5]

Liu H, Shang W, Hu Z, Zheng Y, Yuan J, Hu Q, et al. A novel SigB(Q225P) mutation in Staphylococcus aureus retains virulence but promotes biofilm formation. Emerg Microbes Infect. 2018; 7: 1–12.

[6]

Shang W, Rao Y, Zheng Y, Yang Y, Hu Q, Hu Z, et al. β-Lactam antibiotics enhance the pathogenicity of methicillin-resistant Staphylococcus aureus via SarA-controlled lipoprotein-like cluster expression. mBio. 2019; 10:e00880-19.

[7]

Chen J, Lv Y, Shang W, Yang Y, Wang Y, Hu Z, et al. Loaded delta-hemolysin shapes the properties of Staphylococcus aureus membrane vesicles. Front Microbiol. 2023; 14:1254367.

[8]

Zhao N, Cheng D, Yang Z, Liu Y, Wang Y, Jian Y, et al. Virulence adaption to environment promotes the age-dependent nasal colonization of Staphylococcus aureus. Emerg Microbes Infect. 2022; 11: 1402–1415.

[9]

Hall JW, Yang J, Guo H, Ji Y. The Staphylococcus aureus AirSR two-component system mediates reactive oxygen species resistance via transcriptional regulation of staphyloxanthin production. Infect Immun. 2017; 85:e00838-16.

[10]

Chen L, Wang Z, Xu T, Ge H, Zhou F, Zhu X, et al. The role of graRS in regulating virulence and antimicrobial resistance in methicillin-resistant Staphylococcus aureus. Front Microbiol. 2021; 12:727104.

[11]

Liu Q, Yeo WS, Bae T. The SaeRS two-component system of Staphylococcus aureus. Genes. 2016; 7: 81.

[12]

Múnera-Jaramillo J, López GD, Suesca E, Carazzone C, Leidy C, Manrique-Moreno M. The role of staphyloxanthin In the regulation of membrane biophysical properties in Staphylococcus aureus. Biochim Biophys Acta Biomembr. 2024; 1866:184288.

[13]

Siems K, Runzheimer K, Rebrosova K, Etzbach L, Auerhammer A, Rehm A, et al. Identification of staphyloxanthin and derivates in yellow-pigmented Staphylococcus capitis subsp. capitis. Front Microbiol. 2023; 14:1272734.

[14]

Zamudio-Chávez L, Suesca E, López GD, Carazzone C, Manrique-Moreno M, Leidy C. Staphylococcus aureus modulates carotenoid and phospholipid content in response to oxygen-restricted growth conditions, triggering changes in membrane biophysical properties. Int J Mol Sci. 2023; 24:14906.

[15]

Vila T, Kong EF, Ibrahim A, Piepenbrink K, Shetty AC, McCracken C, et al. Candida albicans quorum-sensing molecule farnesol modulates staphyloxanthin production and activates the thiol-based oxidative-stress response in Staphylococcus aureus. Virulence. 2019; 10: 625–642.

[16]

Liu Y, McQuillen EA, Rana PSJB, Gloag ES, Parsek MR, Wozniak DJ. A bacterial pigment provides cross-species protection from H2O2- and neutrophil-mediated killing. Proc Natl Acad Sci USA. 2024; 121:e2312334121.

[17]

Pandey S, Sahukhal GS, Elasri MO. The msaABCR operon regulates the response to oxidative stress in Staphylococcus aureus. J Bacteriol. 2019; 201: e00417–e00419.

[18]

López GD, Suesca E, Álvarez-Rivera G, Rosato AE, Ibáñez E, Cifuentes A, et al. Carotenogenesis of Staphylococcus aureus: new insights and impact on membrane biophysical properties. Biochim Biophys Acta Mol Cell Biol Lipids. 2021; 1866:158941.

[19]

Liu W, Boudry P, Bohn C, Bouloc P. Staphylococcus aureus pigmentation is not controlled by Hfq. BMC Res Notes. 2020; 13: 63.

[20]

Austin CM, Garabaglu S, Krute CN, Ridder MJ, Seawell NA, Markiewicz MA, et al. Contribution of YjbIH to virulence factor expression and host colonization in Staphylococcus aureus. Infect Immun. 2019; 87:e00155-19.

[21]

Donegan NP, Manna AC, Tseng CW, Liu GY, Cheung AL. CspA regulation of Staphylococcus aureus carotenoid levels and σB activity is controlled by YjbH and Spx. Mol Microbiol. 2019; 112: 532–551.

[22]

Giachino P, Engelmann S, Bischoff M. ςB Activity depends on RsbU in Staphylococcus aureus. J Bacteriol. 2001; 183: 1843–1852.

[23]

Ding Y, Liu X, Chen F, Di H, Xu B, Zhou L, et al. Metabolic sensor governing bacterial virulence in Staphylococcus aureus. Proc Natl Acad Sci USA. 2014; 111: E4981–E4990.

[24]

Yu G, Xi H, Sheng T, Lin J, Luo Z, Xu J. Sub-inhibitory concentrations of tetrabromobisphenol A induce the biofilm formation of methicillin-resistant Staphylococcus aureus. Arch Microbiol. 2024; 206: 301.

[25]

B N, Omar BJ. Enhancing staphyloxanthin synthesis in Staphylococcus aureus using innovative agar media formulations. Cureus. 2024; 16:e59892.

[26]

Yang Y, Zhang L, Huang H, Yang C, Yang S, Gu Y, et al. A flexible binding site architecture provides new insights into CcpA global regulation in Gram-positive bacteria. mBio. 2017; 8:e02004-16.

[27]

Leiba J, Hartmann T, Cluzel ME, Cohen-Gonsaud M, Delolme F, Bischoff M, et al. A novel mode of regulation of the Staphylococcus aureus catabolite control protein A (CcpA) mediated by Stk1 protein phosphorylation. J Biol Chem. 2012; 287: 43607–43619.

[28]

Nuxoll AS, Halouska SM, Sadykov MR, Hanke ML, Bayles KW, Kielian T, et al. CcpA regulates arginine biosynthesis in Staphylococcus aureus through repression of proline catabolism. PLoS Pathog. 2012; 8:e1003033.

[29]

Peng H, Rao Y, Shang W, Yang Y, Tan L, Liu L, et al. Vancomycin-intermediate Staphylococcus aureus employs CcpA-GlmS metabolism regulatory cascade to resist vancomycin. MedComm–Future Med. 2024; 3:e70007.

[30]

Cai X, Li X, Qin J, Zhang Y, Yan B, Cai J. Gene rppA co-regulated by LRR, SigA, and CcpA mediates antibiotic resistance in Bacillus thuringiensis. Appl Microbiol Biotechnol. 2022; 106: 5687–5699.

[31]

Poudel S, Hefner Y, Szubin R, Sastry A, Gao Y, Nizet V, et al. Coordination of CcpA and CodY regulators in Staphylococcus aureus USA300 strains. mSystems. 2022; 7:e0048022.

[32]

Olivier AC, Lemaire S, Van Bambeke F, Tulkens PM, Oldfield E. Role of rsbU and staphyloxanthin in phagocytosis and intracellular growth of Staphylococcus aureus in human macrophages and endothelial cells. J Infect Dis. 2009; 200: 1367–1370.

[33]

Selvaraj A, Valliammai A, Muthuramalingam P, Priya A, Suba M, Ramesh M, et al. Carvacrol targets SarA and CrtM of methicillin-resistant Staphylococcus aureus to mitigate biofilm formation and staphyloxanthin synthesis: an in vitro and in vivo approach. ACS Omega. 2020; 5: 31100–31114.

[34]

Maness PF, Cone GW, Ford DA, McCulla RD. Comparison of low-density lipoprotein oxidation by hydrophilic O(3P)-precursors and lipid-O(3P)-precursor conjugates. Photochem Photobiol. 2023; 99: 1412–1419.

[35]

Hou S, Gao C, Liu J, Chen X, Wei W, Song W, et al. Med3-mediated NADPH generation to help Saccharomyces cerevisiae tolerate hyperosmotic stress. Appl Environ Microbiol. 2024; 90:e0096824.

[36]

Lan T, He S, Luo X, Pi Z, Lai W, Jiang C, et al. Disruption of NADPH homeostasis by total flavonoids from Adinandra nitida Merr. ex Li leaves triggers ROS-dependent p53 activation leading to apoptosis in non-small cell lung cancer cells. J Ethnopharmacol. 2024; 332:118340.

[37]

Elmesseri RA, Saleh SE, Elsherif HM, Yahia IS, Aboshanab KM. Staphyloxanthin as a potential novel target for deciphering promising anti-Staphylococcus aureus agents. Antibiotics. 2022; 11: 298.

[38]

Zhang LL, Li L, Wang D, Hong Y, Tang K, Hong J, et al. Rapid redox-response featured visual ascorbic acid sensor based on simple-assembled europium metal-organic framework. Food Chem. 2024; 459:140339.

[39]

Miwa Y. Evaluation and characterization of catabolite-responsive elements (cre) of Bacillus subtilis. Nucleic Acids Res. 2000; 28: 1206–1210.

[40]

Walsh L, Johnson CN, Hill C, Ross RP. Efficacy of phage- and bacteriocin-based therapies in combatting nosocomial MRSA infections. Front Mol Biosci. 2021; 8:654038.

[41]

Fortuna A, Collalto D, Schiaffi V, Pastore V, Visca P, Ascenzioni F, et al. The Pseudomonas aeruginosa DksA1 protein is involved in H2O2 tolerance and within-macrophages survival and can be replaced by DksA2. Sci Rep. 2022; 12:10404.

[42]

Bentley WE, Mirjalili N, Andersen DC, Davis RH, Kompala DS. Plasmid-encoded protein: the principal factor in the “metabolic burden” associated with recombinant bacteria. Biotechnol Bioeng. 1990; 35: 668–681.

[43]

Rao Y, Peng H, Shang W, Hu Z, Yang Y, Tan L, et al. A vancomycin resistance-associated WalK(S221P) mutation attenuates the virulence of vancomycin-intermediate Staphylococcus aureus. J Adv Res. 2022; 40: 167–178.

[44]

Powers ME, Kim HK, Wang Y, Bubeck Wardenburg J. ADAM10 mediates vascular injury induced by Staphylococcus aureus α-hemolysin. J Infect Dis. 2012; 206: 352–356.

[45]

Seidl K, Stucki M, Ruegg M, Goerke C, Wolz C, et al. Staphylococcus aureus CcpA affects virulence determinant production and antibiotic resistance. Antimicrob Agents Chemother. 2006; 50: 1183–1194.

[46]

Gudeta DD, Lei MG, Lee CY. Contribution of hla regulation by SaeR to Staphylococcus aureus USA300 pathogenesis. Infect Immun. 2019; 87:e00231-19.

[47]

Jin Y, Zhou W, Ge Q, Shen P, Xiao Y. Epidemiology and clinical features of skin and soft tissue infections caused by PVL-positive and PVL-negative methicillin-resistant Staphylococcus aureus isolates in inpatients in China: a single-center retrospective 7-year study. Emerg Microbes Infect. 2024; 13:2316809.

[48]

Zhu K, Chen S, Sysoeva TA, You L. Universal antibiotic tolerance arising from antibiotic-triggered accumulation of pyocyanin in Pseudomonas aeruginosa. PLoS Biol. 2019; 17:e3000573.

[49]

Liao X, Yang F, Wang R, He X, Li H, Kao RYT, et al. Identification of catabolite control protein A from Staphylococcus aureus as a target of silver ions. Chem Sci. 2017; 8: 8061–8066.

[50]

Zhang X, Hu Q, Yuan W, Shang W, Cheng H, Yuan J, et al. First report of a sequence type 239 vancomycin-intermediate Staphylococcus aureus isolate in Mainland of China. Diagn Microbiol Infect Dis. 2013; 77: 64–68.

[51]

Yang Y, Wang H, Zhou H, Hu Z, Shang W, Rao Y, et al. Protective effect of the golden staphyloxanthin biosynthesis pathway on Staphylococcus aureus under cold atmospheric plasma treatment. Appl Environ Microbiol. 2020; 86:e01998-19.

[52]

Liu Y, Mu C, Ying X, Li W, Wu N, Dong J, et al. RNAIII activates map expression by forming an RNA-RNA complex in Staphylococcus aureus. FEBS Lett. 2011; 585: 899–905.

[53]

Zheng Y, Shang W, Peng H, Rao Y, Zhao X, Hu Z, et al. Virulence determinants are required for brain abscess formation through Staphylococcus aureus infection and are potential targets of antivirulence factor therapy. Front Microbiol. 2019; 10: 682.

[54]

Shang W, Hu Q, Yuan W, Cheng H, Yang J, Hu Z, et al. Comparative fitness and determinants for the characteristic drug resistance of ST239-MRSA-III-t030 and ST239-MRSA-III-t037 strains isolated in China. Microb Drug Resist. 2016; 22: 185–192.

[55]

Martini KM, Boddu SS, Nemenman I, Vega NM. Maximum likelihood estimators for colony-forming units. Microbiol Spectr. 2024; 12:e0394623.

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2025 The Author(s). mLife published by John Wiley & Sons Australia, Ltd on behalf of Institute of Microbiology, Chinese Academy of Sciences.

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