Integrating Copernicus Earth Observation and Artificial Intelligence for Habitat Suitability Modeling of Pinctada radiata in Semi-Enclosed Coastal Watersheds of Central Greece

Dimitris Pafras , Alexis Conides , Dimitris Vafidis , Georgos Kapranas , Dimitris Klaoudatos

J. Watershed Ecol. ›› 2026, Vol. 1 ›› Issue (1) : 10003

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J. Watershed Ecol. ›› 2026, Vol. 1 ›› Issue (1) :10003 DOI: 10.70322/jwe.2026.10003
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Integrating Copernicus Earth Observation and Artificial Intelligence for Habitat Suitability Modeling of Pinctada radiata in Semi-Enclosed Coastal Watersheds of Central Greece
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Abstract

Semi-enclosed coastal systems are highly dynamic environments where benthic organisms are exposed to strong hydrographic gradients and increasing anthropogenic pressures. This study assessed the habitat suitability of the pearl oyster Pinctada radiata in two contrasting Mediterranean gulfs of Central Greece, the Maliakos and the South Evoikos, by integrating Copernicus Earth Observation (EO) products with an Artificial Intelligence (AI) modeling framework. Environmental variables, including sea surface temperature, salinity, chlorophyll-a concentration, current velocity, and dissolved oxygen, were derived from satellite and marine datasets and used to train a multi-algorithm ensemble combining Maximum Entropy (MaxEnt), Extreme Gradient Boosting (XGBoost), and a Convolutional Neural Network (CNN). The ensemble model showed strong predictive skill (AUC = 0.94; TSS = 0.80) and identified temperature, dissolved oxygen, and substrate type as the main drivers of habitat suitability. Spatial projections indicated that roughly two-thirds of the study area currently supports favorable conditions for P. radiata, particularly in shallow, low-energy, mesotrophic zones. Under a simulated +2 °C warming scenario, highly suitable habitats declined by about 20%, highlighting the species’ sensitivity to future thermal stress and subsequent oxygen depletion, demonstrating the value of EO-driven AI approaches for anticipating ecological change in vulnerable coastal systems.

Keywords

Copernicus / Artificial intelligence / Pinctada radiata / Habitat suitability / Semi-enclosed gulf / Mediterranean / Machine learning / Climate scenario

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Dimitris Pafras, Alexis Conides, Dimitris Vafidis, Georgos Kapranas, Dimitris Klaoudatos. Integrating Copernicus Earth Observation and Artificial Intelligence for Habitat Suitability Modeling of Pinctada radiata in Semi-Enclosed Coastal Watersheds of Central Greece. J. Watershed Ecol., 2026, 1(1): 10003 DOI:10.70322/jwe.2026.10003

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CRediT authorship contribution statement

Conceptualization, D.P. and D.K.; Methodology, D.P.; Software, D.P.; Validation, D.P., D.K., A.C., D.V. and G.K.; Formal Analysis, D.P.; Investigation, D.P.; Resources, D.K., A.C., D.V. and G.K.; Data Curation, D.P.; Writing-Original Draft Preparation, D.P.; Writing-Review & Editing, D.P., D.K., A.C., D.V. and G.K.; Visualization, D.P.; Supervision, D.K.; Project Administration, D.K.; Funding Acquisition, D.K. All authors have read and agreed to the published version of the manuscript.

Availability of data and materials

The data supporting the findings of this study are available from the corresponding author upon reasonable request. Environmental datasets used in this study were obtained from publicly accessible repositories, including the Copernicus Marine Environment Monitoring Service (CMEMS) and EMODnet. Processed datasets and model outputs generated during the study are available from the corresponding author upon reasonable request.

Funding

This research was funded by the Region of Central Greece, under the Regional Development Programme (PPA), Priority Axis 2.4 “Risk Prevention and Management”, Project Code: Π89-2.13.

Declaration of competing interest

The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Acknowledgements

This research was supported by the research program of the Region of Central Greece (Project Code: Π89-2.13), implemented under the “Regional Development Programme (PPA) of Central Greece”, Priority Axis 2.4 “Risk Prevention and Management”, entitled “Investigation of the Biology, Fisheries, Ecology, and Population Dynamics of the bivalve pearl oyster Pinctada imbricata radiata in the South Evoikos and Maliakos Gulfs”.

References

[1]

Coll M, Piroddi C, Steenbeek J, Kaschner K, Ben Rais Lasram F, Aguzzi J, et al. The biodiversity of the Mediterranean Sea: Estimates, patterns, and threats. PLoS ONE 2010, 5, e11842. DOI:10.1371/journal.pone.0011842

[2]

Bianchi CN, Morri C. Marine biodiversity of the Mediterranean Sea: Situation, problems and prospects for future research. Mar. Pollut. Bull. 2000, 40, 367-376. DOI:10.1016/S0025-326X(00)00027-8

[3]

UNEP/MAP. Mediterranean Quality Status Report 2017; United Nations Environment Programme: Athens, Greece, 2017.

[4]

Cloern JE. Our evolving conceptual model of the coastal eutrophication problem. Mar. Ecol. Prog. Ser. 2001, 210, 223-253. DOI:10.3354/meps210223

[5]

Diaz RJ, Rosenberg R. Spreading dead zones and consequences for marine ecosystems. Science 2008, 321, 926-929. DOI:10.1126/science.1156401

[6]

Solidoro C, Bastianini M, Bandelj V, Codermatz R, Cossarini G, Melaku Canu D, et al. Current state, scales of variability and trends of biogeochemical properties in the Northern Adriatic Sea. J. Geophys. Res. Ocean. 2009, 114, C07S91. DOI:10.1029/2008jc004838

[7]

Pörtner HO, Bock C, Mark FC. Oxygen- and capacity-limited thermal tolerance: Bridging ecology and physiology. J. Exp. Biol. 2017, 220, 2685-2696. DOI:10.1242/jeb.134585

[8]

Kassis D, Krasakopoulou E, Korres G, Petihakis G, Triantafyllou GS. Hydrodynamic features of the South Aegean Sea as derived from Argo T/S and dissolved oxygen profiles in the area. Ocean Dynamics 2016, 66, 1449-1466. DOI:10.1007/s10236-016-0987-2

[9]

Simboura N, Tsapakis M, Pavlidou A, Assimakopoulou G, Pagou K, Kontoyannis H, et al. Assessment of the environmental status in Hellenic coastal waters (Eastern Mediterranean): From the Water Framework Directive to the Marine Strategy Water Framework Directive. Mediterr. Mar. Sci. 2015, 16, 46-64. DOI:10.12681/mms.960

[10]

Poulos SE, Collins MB, Pattiaratchi C, Cramp A, Gull W, Tsimplis M, et al. Oceanography and sedimentation in the semi-enclosed, deep-water Gulf of Corinth (Greece). Mar. Geol. 1996, 134, 213-235. DOI:10.1016/0025-3227(96)00028-X

[11]

Zenetos A, Gofas S, Verlaque M, Çinar ME, García Raso JE, Bianchi CN, et al. Alien species in the Mediterranean Sea by 2010. A contribution to the application of European Union’s Marine Strategy Framework Directive (MSFD). Part 2. Introduction trends and pathways. Mediterr. Mar. Sci. 2012, 13, 328-352. DOI:10.12681/mms.327

[12]

Giovos I, Kleitou P, Poursanidis D, Batjakas I, Bernardi G, Crocetta F, et al. Citizen-science for monitoring marine invasions and stimulating public engagement: A case project from the eastern Mediterranean. Biol. Invasions 2019, 21, 3707-3721. DOI:10.1007/s10530-019-02083-w

[13]

Claudet J, Fraschetti S. Human-driven impacts on marine habitats: A regional meta-analysis in the Mediterranean Sea. Biol. Conserv. 2010, 143, 2195-2206. DOI:10.1016/j.biocon.2010.06.004

[14]

Oral M. Alien fish species in the Mediterranean-Black Sea basin. J. Black Sea/Mediterr. Environ. 2010, 16, 87-132. Available online: https://blackmeditjournal.org/wp-content/uploads/87-132.pdf (accessed on 7 March 2026).

[15]

Tlig-Zouari S, Rabaoui L, Irathni I, Ben Hassine OK. Distribution, habitat and population densities of the invasive species Pinctada radiata (Molluca: Bivalvia) along the Northern and Eastern coasts of Tunisia. Cah. De Biol. Mar. 2009, 50, 131-142.

[16]

Pafras D, Theocharis A, Kondylatos G, Conides A, Klaoudatos D. Population Biology of the Non-Indigenous Rayed Pearl Oyster (Pinctada radiata) in the South Evoikos Gulf, Greece. Diversity. 2024, 16, 460. DOI:10.3390/d16080460

[17]

Hoang TH, Stone DA, Duong DN, Bansemer MS, Harris JO, Qin JG. Colour change of greenlip abalone (Haliotis laevigata Donovan) fed formulated diets containing graded levels of dried macroalgae meal. Aquaculture 2017, 468, 278-285. DOI:10.1016/j.aquaculture.2016.10.027

[18]

Valero Rodriguez JM, Aguilar J, Fernandez-Gonzalez V. Species Selection of Macroalgae with Potential Bioactive Metabolites for Novel Design of IMTA in Offshore Coast Areas of the Mediterranean Sea. Available online: https://ssrn.com/abstract=5745349 (accessed on 7 March 2026).

[19]

Gavrilović A, Piria M, Guo XZ, Jug-Dujaković J, Ljubučić A, Krkić A, et al. First evidence of establishment of the rayed pearl oyster, Pinctada imbricata radiata (Leach, 1814), in the eastern Adriatic Sea. Mar. Pollut. Bull. 2017, 125, 556-560. DOI:10.1016/j.marpolbul.2017.10.045

[20]

Derbali A, Jarboui O, Ghorbel M. Distribution, Abundance and Population Structure of Pinctada radiata (Mollusca: Bivalvia) in Southern Tunisian Waters (Central Mediterranean). 2011. Available online: https://www.cabidigitallibrary.org/doi/full/10.5555/20113062770 (accessed on 7 March 2026).

[21]

Lassoued M, Smaoui-Damak W, Hamza-Chaffai A. Reproductive cycle of the pearl oyster, Pinctada radiata (Mollusca: Pteridae), in the Zarat site (Gulf of Gabès, Tunisia). Euro-Mediterr. J. Environ. Integr. 2018, 3, 18. DOI:10.1007/s41207-018-0056-y

[22]

Aguilo-Arce J, Ferragut JF, Png-Gonzalez L, Carbonell A, Capa M. First genetic survey on the invasive rayed pearl oyster Pinctada radiata (Leach, 1814) populations of the Balearic Islands (Western Mediterranean). Mediterr. Mar. Sci. 2023, 24, 666-678. DOI:10.12681/mms.34195

[23]

Theodorou JA, Perdikaris C, Spinos E. On the occurrence of rayed pearl oyster Pinctada imbricata radiata (Leach, 1814) in Western Greece (Ionian Sea) and its biofouling potential. Biharean Biol. 2019, 13, 4-7. Available online: https://www.researchgate.net/profile/Costas-Perdikaris/publication/327401904_On_the_occurrence_of_rayed_pearl_oyster_Pinctada_imbricata_radiata_Leach_1814_in_Western_Greece_Ionian_Sea_and_its_biofouling_potential/links/5d10545f92851cf4404646c2/On-the-occurrence-of-rayed-pearl-oyster-Pinctada-imbricata-radiata-Leach-1814-in-Western-Greece-Ionian-Sea-and-its-biofouling-potential.pdf (accessed on 7 March 2026).

[24]

Zenetos A, Pancucci-Papadopoulou M, Zogaris S, Papastergiadou E, Vardakas L, Aligizaki K, et al.Aquatic alien species in Greece (2009): Tracking sources, patterns and effects on the ecosystem. J. Biol. Research. Sci. Ann. Sch. Biol. 2009, 12, 135-172. Available online: https://www.academia.edu/download/39261062/0046352ac476cec891000000.pdf (accessed on 7 March 2026).

[25]

Wada KT, Temkin I. Taxonomy and phylogeny of pearl oysters. In The Pearl Oyster, 2nd ed.; Southgate PC, Lucas JS, Eds.; Elsevier: The Netherlands, Amsterdam, 2008; pp. 37-75.

[26]

Southgate PC, Militz TA. Nutrient Compositions of Adductor Muscle from the Pearl Oysters Pinctada maxima and Pinctada margaritifera. J. Shellfish. Res. 2023, 42, 465-469. DOI:10.2983/035.042.0309

[27]

Galanidi M, Zenetos A, Bacher S. Assessing the socio-economic impacts of priority marine invasive fishes in the Mediterranean with the newly proposed SEICAT methodology. Mediterr. Mar. Sci. 2018, 19, 107. DOI:10.12681/mms.15940

[28]

Al Saadi A.Population Structure and Patterns of Genetic Variation in a Pearl Oyster (Pinctada radiata) Native to the Arabian Gulf. Ph.D. Dissertation, Queensland University of Technology, Brisbane, Australia, 2013.

[29]

Pafras D, Apostologamvrou C, Balatsou A, Theocharis A, Lolas A, Hatziioannou M, et al. Reproductive Biology of Pearl Oyster (Pinctada radiata, Leach 1814) Based on Microscopic and Macroscopic Assessment of Both Sexes in the Eastern Mediterranean (South Evia Island). J. Mar. Sci. Eng. 2024, 12, 1259. DOI:10.3390/jmse12081259

[30]

Brando VE, Santoleri R, Colella S, Volpe G, Di Cicco A, Sammartino M, et al. Overview of operational global and regional Ocean Colour essential ocean variables within the Copernicus marine Service. Remote Sens. 2024, 16, 4588. DOI:10.3390/rs16234588

[31]

Wolters E, Toté C, Sterckx S, Adriaensen S, Henocq C, Bruniquel J, et al.iCOR Atmospheric correction on Sentinel-3/OLCI over land: Intercomparison with AERONET, RadCalNet, and SYN Level-2. Remote Sens. 2021, 13, 654. DOI:10.3390/rs13040654

[32]

Kerr JT, Ostrovsky M. From space to species: Ecological applications for remote sensing. Trends Ecol. Evol. 2003, 18, 299-305. DOI:10.1016/S0169-5347(03)00071-5

[33]

Fingas M.Remote Sensing for Marine Management. In World Seas:An Environmental Evaluation, 2nd ed.; Sheppard C, Ed.; Elsevier:Amsterdam, The Netherlands; Academic Press: Cambridge, MA, USA, 2019; pp. 103-119. DOI:10.1016/B978-0-12-805052-1.00005-X

[34]

Elith J, Leathwick JR. Species Distribution Models: Ecological Explanation and Prediction Across Space and Time. Annu. Rev. Ecol. Evol. Syst. 2009, 40, 677-697. DOI:10.1146/annurev.ecolsys.110308.120159

[35]

Guisan A, Zimmermann NE. Predictive habitat distribution models in ecology. Ecol. Modell. 2000, 135, 147-186. DOI:10.1016/S0304-3800(00)00354-9

[36]

Phillips SJ, Anderson RP, Schapire RE. Maximum entropy modeling of species geographic distributions. Ecol. Modell. 2006, 190, 231-259. DOI:10.1016/j.ecolmodel.2005.03.026

[37]

Franklin J. Mapping Species Distributions: Spatial Inference and Prediction; Cambridge University Press: Cambridge, UK, 2010. DOI:10.1017/S0030605310001201

[38]

Melo-Merino SM, Reyes-Bonilla H, Lira-Noriega A. Ecological niche models and species distribution models in marine environments: A literature review and spatial analysis of evidence. Ecol. Modell. 2020, 415, 108837. DOI:10.1016/j.ecolmodel.2019.108837

[39]

Olden JD, Lawler JJ, Poff NL. Machine learning methods without tears: A primer for ecologists. Q. Rev. Biol. 2008, 83, 171-193. DOI:10.1086/587826

[40]

Breiman L. Random forests. Mach. Learn. 2001, 45, 5-32. DOI:10.1023/A:1010933404324

[41]

Friedman JH. Greedy function approximation: A gradient boosting machine. Ann. Stat. 2001, 29, 1189-1232. DOI:10.1214/aos/1013203451

[42]

Chen T, Guestrin C. XGBoost: A scalable tree boosting system. In Proceedings of the 22nd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, San Francisco, CA, USA, 13-17 August 2016; pp. 785-794. DOI:10.1145/2939672.2939785

[43]

Hinton GE.Learning multiple layers of representation. Trends Cogn. Sci. 2007, 11, 428-434. DOI:10.1016/j.tics.2007.09.004

[44]

Lundberg SM, Lee S-I.A unified approach to interpreting model predictions. In Advances in Neural Information Processing Systems (NIPS); NeurIPS Proceedings: San Diego, CA, USA, 2017; pp. 4765-4774.

[45]

Selvaraju RR, Cogswell M, Das A, Vedantam R, Parikh D, Batra D. Grad-CAM: Visual explanations from deep networks. In Proceedings of the 2017 IEEE International Conference on Computer Vision (ICCV), Venice, Italy, 22-29 October 2017; pp. 618-626. DOI:10.1109/ICCV.2017.74

[46]

Hengl T, Nussbaum M, Wright MN, Heuvelink GB, Gräler B. Random forest as a generic framework for predictive modeling of spatial and spatio-temporal variables. PeerJ 2018, 6, e5518. DOI:10.7717/peerj.5518

[47]

Leroy B.Choosing presence-only species distribution models. J. Biogeogr. 2022, 50, 247-250. DOI:10.1111/jbi.14505

[48]

Souissi S, Molinero JC, Beaugrand G, Anneville O, Licandro P, Schmitt F, et al. Effects of global changes on aquatic ecosystems in Western Europe: Role of plankton communities. GLOBEC Int. Newsl. 2007, 13, 23-25. Available online: https://oceanrep.geomar.de/id/eprint/3300/1/GLOBEC_13_1_part1.pdf (accessed on 7 March 2026).

[49]

Stathopoulos N, Kalogeropoulos K, Vasileiou E, Louka P, Tsesmelis DE, Tsatsaris A. Charting the changes: Geographic Information System and Remote Sensing study on soil erosion and coastal transformations in Maliakos Gulf, Greece. In Geographical Information Science; Elsevier: Amsterdam, The Netherlands, 2024; pp. 207-230. DOI:10.1016/B978-0-443-13605-4.00005-9

[50]

Tintoré J, Pinardi N, Álvarez-Fanjul E, Aguiar E, Álvarez-Berastegui D, Bajo M, et al. Challenges for sustained observing and forecasting systems in the Mediterranean Sea. Front. Mar. Sci. 2019, 6, 568. DOI:10.3389/fmars.2019.00568

[51]

Katsanevakis S, Tempera F, Teixeira H. Mapping the impact of alien species on marine ecosystems: The Mediterranean Sea case study. Divers. Distrib. 2016, 22, 694-707. DOI:10.1111/ddi.12429

[52]

Beaugrand G, Kirby RR. Quasi-deterministic responses of marine species to climate change. Clim. Res. 2016, 69, 117-128. DOI:10.3354/cr01398

[53]

Aspioti AG, Fourniotis NT. A brief review of hydrodynamic circulation in the Mediterranean gulfs. Dynamics 2024, 4, 873-888. DOI:10.3390/dynamics4040045

[54]

Zananiri I, Vakalas I. Surficial Sediment Distribution in a Complex Marine Setting The Example of Coastal and Open Sea Areas of Evia Island, Central Aegean, Greece. Oceans 2025, 6, 8. DOI:10.3390/oceans6010008

[55]

ΠΟΥΛΟΣ ΣE, ΔΡΑΚΟΠΟΥΛΟΣ ΠΓ, ΛΕΟΝΤΑΡΗΣ ΣΝ, ΤΣΑΠΑΚΗΣ Ε, ΧΑΤΖΗΓΙΑΝΝΗ Ε. The Contribution of Tidal Currents to the Sedimentation of the Strait of Avlida, Southern Evoikos Gulf (Greece). Bull. Geol. Soc. Greece 2018, 34, 731-736. DOI:10.12681/bgsg.17350

[56]

Dimitriou PD, Karakassis I, Pitta P, Tsagaraki TM, Apostolaki ET, Magiopoulos I, et al. Mussel farming in Maliakos Gulf and quality indicators of the marine environment: Good benthic below poor pelagic ecological status. Mar. Pollut. Bull. 2015, 101, 784-793. DOI:10.1016/j.marpolbul.2015.09.035

[57]

Araújo MB, Peterson AT. Uses and misuses of bioclimatic envelope modeling. Ecology 2012, 93, 1527-1539. DOI:10.1890/11-1930.1

[58]

Beck HE, Zimmermann NE, McVicar TR, Vergopolan N, Berg A, Wood EF. Present and future Köppen-Geiger climate classification maps at 1-km resolution. Sci. Data. 2018, 5, 180214. DOI:10.1038/sdata.2018.214

[59]

Kuhn M, Johnson K. Applied Predictive Modeling; Springer: New York, NY, USA, 2013; Volume 26, p. 13.

[60]

Motrenko A, Strijov V. Multi-way feature selection for ECoG-based Brain-Computer Interface. Expert Syst. Appl. 2018, 114, 402-413. DOI:10.1016/j.eswa.2018.06.054

[61]

Soininen J, Luoto M. Predictability in species distributions: A global analysis across organisms and ecosystems. Glob. Ecol. Biogeogr. 2014, 23, 1264-1274. DOI:10.1111/geb.12204

[62]

Czarnoleski M, Kozlowski J, Lewandowski K, Müller T, Stanczykowska A. The Zebra Mussel in Europe; Backhuys Publishers: Leiden, The Netherlands; Margraf Publishers: Weikersheim, Germany, 2010.

[63]

Lejeusne C, Chevaldonné P, Pergent-Martini C, Boudouresque CF, Pérez T. Climate change effects on a miniature ocean: The highly diverse, highly impacted Mediterranean Sea. Trends Ecol. Evol. 2010, 25, 250-260. DOI:10.1016/j.tree.2009.10.009

[64]

Vaquer-Sunyer R, Duarte CM. Thresholds of hypoxia for marine biodiversity. Proc. Natl. Acad. Sci. USA 2008, 105, 15452-15457. DOI:10.1073/pnas.0803833105

[65]

Behrenfeld MJ, Boss ES. Resurrecting the ecological underpinnings of ocean plankton blooms. Annu. Rev. Mar. Sci. 2014, 6, 167-194. DOI:10.1146/annurev-marine-052913-021325

[66]

Scheuring CI. Impact of Ocean Acidification (OA) on the Acid-Base Regulation of Polar Cod: Time and Localized Tracking of Brain pH Changes. Ph.D. Dissertation, Universität Rostock, Rostock, Germany, 2019.

[67]

Treml EA, Halpin PN, Urban DL, Pratson LF. Modeling population connectivity by ocean currents, a graph-theoretic approach for marine conservation. Landsc. Ecol. 2008, 23 (Suppl. S1), 19-36. DOI:10.1007/s10980-007-9138-y

[68]

Speight MR, Henderson PA. Marine Ecology: Concepts and Applications; John Wiley & Sons: Hoboken, NJ, USA, 2013.

[69]

Lucena-Moya P, Gómez-Rodríguez C, Pardo I. Spatio-temporal variability in water chemistry of Mediterranean coastal lagoons and its management implications. Wetlands 2012, 32, 1033-1045. DOI:10.1007/s13157-012-0334-4

[70]

Powley HR, Van Cappellen P, Krom MD. Nutrient cycling in the Mediterranean Sea: The key to understanding how the unique marine ecosystem functions and responds to anthropogenic pressures. In Mediterranean Identities-Environment, Society, Culture; InTech: London, UK, 2017; pp. 47-77. DOI:10.5772/intechopen.70878

[71]

Stolar J, Nielsen SE, Franklin J. Accounting for spatially biased sampling effort in presence-only species distribution modelling. Divers. Distrib. 2015, 21, 595-608. DOI:10.1111/ddi.12279

[72]

Pebesma E. Simple Features for R: Standardized Support for Spatial Vector Data. R J. 2018, 10, 439. DOI:10.32614/RJ-2018-009

[73]

Katsanevakis S, Wallentinus I, Zenetos A, Leppäkoski E, Çinar ME, Ozturk B, et al. Impacts of invasive alien marine species on ecosystem services and biodiversity: A pan-European review. Aquat. Invasions 2014, 9, 391-423. DOI:10.3391/ai.2014.9.4.01

[74]

Occhipinti-Ambrogi A, Marchini A, Cantone G, Castelli A, Chimenz C, Cormaci M, et al. Alien species along the Italian coasts: An overview. Biol. Invasions 2011, 13, 215-237. DOI:10.1007/s10530-010-9803-y

[75]

Rotter A, Klun K, Francé J, Mozetič P, Orlando-Bonaca M. Non-indigenous species in the Mediterranean Sea: Turning from pest to source by developing the 8Rs model, a new paradigm in pollution mitigation. Front. Mar. Sci. 2020, 7, 178. DOI:10.3389/fmars.2020.00178

[76]

Silverman BW. Density Estimation for Statistics and Data Analysis; Routledge: London, UK, 2018. DOI:10.1201/9781315140919

[77]

Phillips SJ, Dudík M, Elith J, Graham CH, Lehmann A, Leathwick J, et al. Sample selection bias and presence-only distribution models: Implications for background and pseudo-absence data. Ecol. Appl. 2009, 19, 181-197. DOI:10.1890/07-2153.1

[78]

Dormann CF, Elith J, Bacher S, Buchmann C, Carl G, Carré G, et al. Collinearity: A review of methods to deal with it and a simulation study evaluating their performance. Ecography 2013, 36, 27-46. DOI:10.1111/j.1600-0587.2012.07348.x

[79]

Zuur AF, Ieno EN, Elphick CS. A protocol for data exploration to avoid common statistical problems. Methods Ecol. Evol. 2010, 1, 3-14. DOI:10.1111/j.2041-210X.2009.00001.x

[80]

Guisan A, Thuiller W, Zimmermann NE. Habitat Suitability and Distribution Models: With Applications in R; Cambridge University Press: Cambridge, UK, 2017.

[81]

Breiner FT, Guisan A, Bergamini A, Nobis MP. Overcoming limitations of modelling rare species by using ensembles of small models. Methods Ecol. Evol. 2015, 6, 1210-1218. DOI:10.1111/2041-210X.12403

[82]

Bivand RS, Pebesma E, Gómez-Rubio V. Applied Spatial Data Analysis with R, 2nd ed.; Springer: Berlin/Heidelberg, Germany, 2013. DOI:10.1007/978-0-387-78171-6_8

[83]

Legendre P, Legendre L. Numerical Ecology, 3rd ed.; Elsevier: Amsterdam, The Netherlands, 2012.

[84]

Araújo MB, New M.Ensemble forecasting of species distributions. Trends Ecol. Evol. 2007, 22, 42-47. DOI:10.1016/j.tree.2006.09.010

[85]

Thuiller W, Lafourcade B, Engler R, Araújo MB. BIOMOD—A platform for ensemble forecasting of species distributions. Ecography 2009, 32, 369-373. DOI:10.1111/j.1600-0587.2008.05742.x

[86]

Schneider F.Adaptation of Baccharis L. in Chile to environmental factors on a landscape scale. In Evolution in the Genus Baccharis L.; Verlagsname nicht ermittelbar: Dresden, Germany, 2025; p. 137.

[87]

Phillips SJ, Dudík M. Modeling of species distributions with Maxent: New extensions and a comprehensive evaluation. Ecography 2008, 31, 161-175. DOI:10.1111/j.0906-7590.2008.5203.x

[88]

Temlyakov V. Sparse sampling recovery by greedy algorithms. IMA J. Numer. Anal. 2025, 45, draf054. DOI:10.1093/imanum/draf054

[89]

Lecun Y, Bengio Y, Hinton G. Deep learning. Nature 2015, 521, 436-444. DOI:10.1038/nature14539

[90]

Vamosi SM, Heard SB, Vamosi JC, Webb CO. Emerging patterns in the comparative analysis of phylogenetic community structure. Mol. Ecol. 2009, 18, 572-592. DOI:10.1111/j.1365-294X.2008.04001.x

[91]

Marmion M, Parviainen M, Luoto M, Heikkinen RK, Thuiller W. Evaluation of consensus methods in predictive species distribution modelling. Divers. Distrib. 2009, 15, 59-69. DOI:10.1111/j.1472-4642.2008.00491.x

[92]

Hao T, Elith J, Guillera-Arroita G, Lahoz-Monfort JJ, Serra‐Diaz J. A review of evidence about use and performance of species distribution modelling ensembles like BIOMOD. Divers. Distrib. 2019, 25, 839-852. DOI:10.1111/ddi.12892

[93]

Valavi R, Elith J, Lahoz-Monfort JJ, Guillera-Arroita G. blockCV: An R package for generating spatially or environmentally separated folds for k-fold cross-validation of species distribution models. Methods Ecol. Evol. 2019, 10, 225-232. DOI:10.1101/357798

[94]

Demler OV, Pencina MJ, D’Agostino RB, Sr. Misuse of the DeLong test to compare AUCs for nested models. Stat. Methods Med. Res. 2012, 21, 361-373. DOI:10.1002/sim.5328

[95]

Peterson AT, Papes M, Soberón J. Rethinking receiver operating characteristic analysis: Ecological niche modeling evaluation. Ecol. Model. 2008, 213, 63-72. DOI:10.1016/j.ecolmodel.2007.11.008

[96]

Molnar C.Interpretable Machine Learning, 2nd ed.; Lulu.com: Morrisville, NC, USA, 2022.

[97]

Zimmer AC. A model for the interpretation of verbal predictions. Int. J. Man-Mach. Stud. 1984, 20, 121-134. DOI:10.1016/S0020-7373(84)80009-7

[98]

Debray TP, Damen JA, Snell KI, Ensor J, Hooft L, Reitsma JB, et al. A guide to systematic review and meta-analysis of prediction model performance. BMJ 2017, 356, i6460. DOI:10.1136/bmj.i6460

[99]

Ribeiro MT, Singh S, Guestrin C. “Why Should I Trust You?” Explaining the predictions of any classifier. In Proceedings of the 22nd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, San Francisco, CA, USA, 13-17 August 2016; pp. 1135-1144. DOI:10.1145/2939672.2939778

[100]

Zhao F, Luo H, Geng H, Sun Q. An RSSI gradient-based AP localization algorithm. China Commun. 2014, 11, 100-108. DOI:10.1109/CC.2014.6821742

[101]

Johnson LB. Analyzing spatial and temporal phenomena using geographical information systems: A review of ecological applications. Landsc. Ecol. 1990, 4, 31-43. DOI:10.1007/BF02573949

[102]

Elith J, Kearney M, Phillips SJ. The art of modelling range-shifting species. Methods Ecol. Evol. 2010, 1, 330-342. DOI:10.1111/j.2041-210X.2010.00036.x

[103]

Biecek P. Explanatory Model Analysis; Chapman & Hall/CRC Press: Boca Raton, FL, USA, 2021. DOI:10.1201/9780429027192

[104]

Murphy K. Probabilistic Machine Learning: Advanced Topics; MIT Press: Cambridge, MA, USA, 2023.

[105]

Liu C, White M, Newell G, Pearson R. Selecting thresholds for the prediction of species occurrence with presence-only data. J. Biogeogr. 2013, 40, 778-789. DOI:10.1111/jbi.12058

[106]

Roberts DR, Bahn V, Ciuti S, Boyce MS, Elith J, Guillera‐Arroita G, et al. Cross-validation strategies for data with temporal, spatial, hierarchical, or phylogenetic structure. Ecography 2017, 40, 913-929. DOI:10.1111/ecog.02881

[107]

Beale CM, Lennon JJ, Gimona A. Opening the climate envelope reveals no macroscale associations with climate in European birds. Proc. Natl. Acad. Sci. USA 2008, 105, 14908-14912. DOI:10.1073/pnas.0803506105

[108]

Forrestal FC, Schirripa M, Goodyear CP, Arrizabalaga H, Babcock EA, Coelho R, et al. Testing robustness of CPUE standardization and inclusion of environmental variables with simulated longline catch datasets. Fish. Res. 2019, 210, 1-13. DOI:10.1016/j.fishres.2018.09.025

[109]

Maréchaux I, Fischer FJ, Schmitt S, Chave J. TROLL 4.0: Representing water and carbon fluxes, leaf phenology and intraspecific trait variation in a mixed-species individual-based forest dynamics model-Part 1: Model description. Geosci. Model Dev. 2025, 18, 5143-5204. DOI:10.5194/gmd-18-5143-2025

[110]

Anselin L. An Introduction to Spatial Autocorrelation Analysis with GeoDa; Spatial Analysis Laboratory, University of Illinois, Champagne-Urbana: Champaign, IL, USA, 2003.

[111]

Thuiller W, Münkemüller T.Habitat suitability modeling. In Effects of Climate Change on Birds; Oxford University Press: Oxford, UK, 2010; pp. 77-85.

[112]

Hijmans RJ, Elith J. Species Distribution Modeling with R. R Cran Project. 2013. Available online: https://www.researchgate.net/profile/Mohamed-Mourad-Lafifi/post/How_to_loop_multiple_maxent_models/attachment/5f4c3571ce377e00016fe61a/AS%3A930374343483392%401598829937118/download/Species+distribution+modeling+with+R.pdf (accessed on 7 March 2026).

[113]

Zurell D, Franklin J, König C, Bouchet PJ, Dormann CF, Elith J, et al. A standard protocol for reporting species distribution models. Ecography 2020, 43, 1261-1277. DOI:10.1111/ecog.04960

[114]

Butitta VL. Natural History and Conservation of Freshwater Mussels (Order: Unionida) of Wisconsin; The University of Wisconsin-Madison: Madison, WI, USA, 2022.

[115]

Anestis A, Lazou A, Pörtner HO, Michaelidis B. Behavioral, metabolic, and molecular stress responses of marine bivalve Mytilus galloprovincialis during long-term acclimation at increasing ambient temperature. Am. J. Physiol.-Regul. Integr. Comp. Physiol. 2007, 293, R911-R921. DOI:10.1152/ajpregu.00124.2007

[116]

Bruhns T.Metabolic Responses to Multiple Stressors (Oxygen, Temperature and Pollutants) in Benthic Marine Invertebrates. Ph.D. Dissertation, Universität Rostock, Rostock, Germany, 2024.

[117]

Skoulikidis NT, Mentzafou A. Freshwater and matter inputs in the Aegean coastal system. In The Aegean Sea Environment:The Geodiversity of the Natural System; Springer International Publishing: Cham, Switzerland, 2021; pp. 73-114. DOI:10.1007/698_2020_732

[118]

Lagaria A, Mandalakis M, Mara P, Frangoulis C, Karatsolis BT, Pitta P, et al. Phytoplankton dynamics and community structure in relation to hydrographic features in the NE Aegean frontal area (NE Mediterranean). Cont. Shelf Res. 2017, 149, 124-137. DOI:10.1016/j.csr.2016.07.014

[119]

Anagnostou C, Kostianoy A, Mariolakos I, Panayotidis P, Soilemezidou M, Tsaltas G. The Aegean Sea:A “water way” connecting the diverse marine ecosystems of the Black Sea and the eastern Mediterranean Sea. In The Aegean Sea Environment:The Geodiversity of the Natural System; Springer International Publishing: Cham, Switzerland, 2022; pp. 3-48. DOI:10.1007/698_2022_902

[120]

Hayer CA.Fish Assemblage Structure, Trophic Ecology, and Potential Effects of Invading Asian Carps in Three Missouri River Tributaries, South Dakota. Ph.D. Dissertation, Natural Resource Management Department, South Dakota State University, Brookings, SD, USA, 2014.

[121]

Mostafa S, Mondal D, Panjvani K, Kochian L, Stavness I. Explainable deep learning in plant phenotyping. Front. Artif. Intell. 2023, 6, 1203546. DOI:10.3389/frai.2023.1203546

[122]

Cheung WW, Maire E, Oyinlola MA, Robinson JP, Graham NA, Lam VW, et al. Climate change exacerbates nutrient disparities from seafood. Nat. Clim. Change 2023, 13, 1242-1249. DOI:10.1038/s41558-023-01822-1

[123]

Moglia S, Betti F, Boero F, Canessa M, Camillo CGD, Enrichetti F, et al. Climate-driven shifts in a Mediterranean hydrozoan assemblage over 44 years. ICES J. Mar. Sci. 2025, 82, fsaf113. DOI:10.1093/icesjms/fsaf113

[124]

Vargas-Yáñez M, García MJ, Salat J, García-Martínez MDC, Pascual J, Moya F. Warming trends and decadal variability in the Western Mediterranean shelf. Glob. Planet. Change 2008, 63, 177-184. DOI:10.1016/j.gloplacha.2007.09.001

[125]

Otsu K, Maso J. Digital Twins for Research and Innovation in Support of the European Green Deal Data Space: A Systematic Review. Remote Sens. 2024, 16, 3672. DOI:10.3390/rs16193672

[126]

Duarte CM, Agustı́ S, Kennedy H, Vaqué D. The Mediterranean climate as a template for Mediterranean marine ecosystems: The example of the northeast Spanish littoral. Prog. Oceanogr. 1999, 44, 245-270. DOI:10.1016/S0079-6611(99)00028-2

[127]

Macias D, Garcia-Gorriz E, Stips A. Deep winter convection and phytoplankton dynamics in the NW Mediterranean Sea under present climate and future (horizon 2030) scenarios. Sci. Rep. 2018, 8, 6626. DOI:10.1038/s41598-018-24965-0

[128]

Micheli F, Levin N, Giakoumi S, Katsanevakis S, Abdulla A, Coll M, et al. Setting priorities for regional conservation planning in the Mediterranean Sea. PLoS ONE 2013, 8, e59038. DOI:10.1371/journal.pone.0059038

[129]

Macias DM, Garcia-Gorriz E, Stips A. Productivity changes in the Mediterranean Sea for the twenty-first century in response to changes in the regional atmospheric forcing. Front. Mar. Sci. 2015, 2, 79. DOI:10.3389/fmars.2015.00079

[130]

Carré A, Abdul Malak D, Isabel Marín A, Trombetti M, Ruf K, Hennekens S, et al. Comparative Analysis of EUNIS Habitats Modelling and Extended Ecosystem Mapping: Toward a Shared and Multifunctional Map of European Wetland and Coastal Ecosystems; ETC/BD Report to the EEA; European Topic Centre on Biological Diversity: Paris, France, 2021.

[131]

Fisher BF.Collective Memory, the Media, and the Social Construction of Postmodern War. Ph.D. Dissertation, Rutgers the State University of New Jersey, School of Graduate Studies, New Brunswick, NJ, USA, 2004.

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