Detection of leukocyte adhesion deficiency type 1 in an infant by high-throughput targeted exome sequencing

Sha Hong , Li-Juan Xie , Qing-Nan Yang , Tian-Wen Zhu

Journal of Translational Genetics and Genomics ›› 2018, Vol. 2 ›› Issue (1) : 8

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Journal of Translational Genetics and Genomics ›› 2018, Vol. 2 ›› Issue (1) :8 DOI: 10.20517/jtgg.2018.06
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Detection of leukocyte adhesion deficiency type 1 in an infant by high-throughput targeted exome sequencing
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Abstract

Leukocyte adhesion deficiency type 1 (LAD-I) characterized by immune-deficiency and leukocytosis is rare in infant patients. A 43-day-old boy with severe leukocytosis, recurrent infections, defective wound healing and hepatosplenomegaly associated with an acquired cytomegalovirus infection. To establish the diagnosis definitively, a high-throughput targeted exome sequencing was performed, which yielded the diagnosis of LAD-I. A homozygous mutation in integrin subunit beta 2 (ITGB2), c.817G>A (p.G273R) was identified. Though LAD-I has been thoroughly-studied, with more than 300 detailed cases and 96 mutations in ITGB2, establishing a definitive diagnosis of LAD-I in infancy is challenging because of the lack of typical clinical presentations. Better understanding the molecular characterization of this disease is necessary to increase awareness and identification of infants with LAD-I.

Keywords

Immunodeficiency / leukocyte adhesion deficiency type 1 / leukocytosis / ITGB2 gene / high-throughput targeted exome sequencing

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Sha Hong, Li-Juan Xie, Qing-Nan Yang, Tian-Wen Zhu. Detection of leukocyte adhesion deficiency type 1 in an infant by high-throughput targeted exome sequencing. Journal of Translational Genetics and Genomics, 2018, 2(1): 8 DOI:10.20517/jtgg.2018.06

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References

[1]

Hanna S.Leukocyte adhesion deficiencies.Ann N Y Acad Sci2012;1250:50-5

[2]

Schmidt S,Sperandio M.The molecular basis of leukocyte recruitment and its deficiencies.Mol Immunol2013;55:49-58

[3]

Lim EC,Lai AH,Tan ES,Ng IS.Next-generation sequencing using a pre-designed gene panel for the molecular diagnosis of congenital disorders in pediatric patients.Hum Genomics2015;9:33-43 PMCID:PMC4678573

[4]

Boqh LD.Flow cytometry instrumentation in research and clinical laboratories.Clin Lab Sci1993;6:167-73

[5]

Fernandez MA,Couce ML.NGS technologies as a turning point in rare disease research, diagnosis and treatment.Curr Med Chem2018;25:404-32

[6]

Nijman IJ,Hoogstraat M,van de Corput L,van Zon P,Elferink MG,Vermont CL,Janson E,Ploos van Amstel JK.Targeted next-generation sequencing: a novel diagnostic tool for primary immunodeficiencies.J Allergy Clin Immunol2014;133:529-34

[7]

Kuijpers TW,Hamann D,Thung LY,Verhoeven AJ.Leukocyte adhesion deficiency type 1 (LAD-I)/variant.A novel immunodeficiency syndrome characterized by dysfunctional beta2 integrins. J Clin Invest1997;100:1725-33 PMCID:PMC508355

[8]

Hodges KB,Larson RS.Rarity of genomic instability in pathogenesis of systemic anaplastic large cell lymphoma (ALCL) in immunocompetent patients.Hum Pathol1999;30:173-7

[9]

Jackson SE,Arens R,van den Berg SPH,Čičin-Šain L,Wills MR.CMV immune evasion and manipulation of the immune system with aging.Geroscience2017;39:273-91 PMCID:PMC5505894

[10]

Dana N,Pitt J,Arnaout MA.Deficiency of a surface membrane glycoprotein (Mo1) in man.J Clin Invest1984;73:153-9 PMCID:PMC424986

[11]

Roos D,de Boer M,Weening RS,Tezcan I,Law SK.Genetic analysis of patients with leukocyte adhesion deficiency: genomic sequencing reveals otherwise undetectable mutations.Exp Hematol2002;30:252-61

[12]

Sligh JEJr,Zhu CM,Beaudet AL.An initiation codon mutation in CD18 in association with the moderate phenotype of leukocyte adhesion deficiency.J Biol Chem1992;267:714-8

[13]

van de Vijver E,Sanal Ö,Uzel G,de Boer M,Köker MY,Fischer A,Klein N,Unal E,Belohradsky BH,Somech R,Roos D.Hematologically important mutations: leukocyte adhesion deficiency (first update)..Blood Cells Mol Dis2012;48:53-61 PMCID:PMC4539347

[14]

Bernard Cher TH,Klein GF,Schadenböck-Kranzl G,Roca X.A novel 3’ splice-site mutation and a novel gross deletion in leukocyte adhesion deficiency (LAD)-1.Biochem Biophys Res Commun2011;404:1099-104

[15]

Roos D.Hematologically important mutations: leukocyte adhesion deficiency.Blood Cells Mol Dis2001;27:1000-4

[16]

Fiorini M,Schumacher RF,Bertini V,Notarangelo L,Barlati S.ITGB2 mutation combined with deleted ring 21 chromosome in a child with leukocyte adhesion deficiency.J Allergy Clin Immunol2009;124:1356-8

[17]

López Rodríguez C,Grospierre B,Fischer A,Corbí AL.Characterization of two new CD18 alleles causing severe leukocyte adhesion deficiency.Eur J Immunol1993;23:2792-8

[18]

Moore SW,Zaahl MG.The ITGB2 immunomodulatory gene (CD18), enterocolitis, and Hirschsprung's disease.J Pediatr Surg2008;43:1439-44

[19]

Hinze CH,Bove KE,Bleesing JH.Leukocyte adhesion deficiency type 1 presenting with recurrent pyoderma gangrenosum and flaccid scarring.Pediatr Dermatol2010;27:500-3

[20]

Tone Y,Shibata F,Hashida Y,Koizumi S.Somatic revertant mosaicism in a patient with leukocyte adhesion deficiency type 1.Blood2007;109:1182-4

[21]

Allende LM,Corell A,Varela P,Caragol I,Guillén-Perales J,Espa-ol T.A novel CD18 genomic deletion in a patient with severe leucocyte adhesion deficiency: a possible CD2/lymphocyte function-associated antigen-1 functional association in humans.Immunology2000;99:440-50 PMCID:PMC2327173

[22]

Parvaneh N,Rezaei A,Tamizifar B,Sherkat R,Kashef S,Isaeian A,Aghamohammadi A.Characterization of 11 new cases of leukocyte adhesion deficiency type 1 with seven novel mutations in the ITGB2 gene.J Clin Immunol2010;30:756-60

[23]

Matsuura S,Tsukahara M,Matsuda I,Kajii T.Leukocyte adhesion deficiency: identification of novel mutations in two Japanese patients with a severe form.Biochem Biophys Res Commun1992;184:1460-7

[24]

Uzel G,Rosenzweig SD,Shaw JM,Linton GF,Kirby MR,Brown MR,Law SK.Reversion mutations in patients with leukocyte adhesion deficiency type-1 (LAD-1)..Blood2008;111:209-18 PMCID:PMC2200806

[25]

Lorusso F,Jalil AK,Tan SL.Preimplantation genetic diagnosis of leukocyte adhesion deficiency type I.Fertil Steril2006;85:494.e15-8

[26]

Hogg N,Scarth SL,Shaw JM,Klein N.A novel leukocyte adhesion deficiency caused by expressed but nonfunctional beta2 integrins Mac-1 and LFA-1.J Clin Invest1999;103:97-106 PMCID:PMC407855

[27]

Wardlaw AJ,Stacker SA.Distinct mutations in two patients with leukocyte adhesion deficiency and their functional correlates.J Exp Med1990;172:335-45

[28]

Back AL,Hickstein DD.Identification of two molecular defects in a child with leukocyte adherence deficiency.J Biol Chem1992;267:5482-7

[29]

Yassaee VR,Boosaliki S.Mutation spectra of the ITGB2 gene in Iranian families with leukocyte adhesion deficiency type 1.Hum Immunol2016;77:191-5

[30]

Arnaout MA,Gupta SK,Fathallah DM.Point mutations impairing cell surface expression of the common beta subunit (CD18) in a patient with leukocyte adhesion molecule (Leu-CAM) deficiency.J Clin Invest1990;85:977-81 PMCID:PMC296520

[31]

Tone Y,Shibata F,Hashida Y,Koizumi S.Somatic revertant mosaicism in a patient with leukocyte adhesion deficiency type 1.Blood2007;109:1182-4

[32]

Ohashi Y,Tsuchiya S,Konno T.Familial genetic defect in a case of leukocyte adhesion deficiency.Hum Mutat1993;2:458-67

[33]

Cox DP.Leukocyte adhesion deficiency type 1: an important consideration in the clinical differential diagnosis of prepubertal periodontitis.A case report and review of the literature. Oral Surg Oral Med Oral Pathol Oral Radiol Endod2008;105:86-90

[34]

Nelson C,Arnaout MA.Genetic cause of leukocyte adhesion molecule deficiency.Abnormal splicing and a missense mutation in a conserved region of CD18 impair cell surface expression of beta 2 integrins. J Biol Chem1992;267:3351-7

[35]

Shaw JM,Boxer LA,Dodds AW,Nolan SM,Roos D,Simmons DL,Law SK.Characterization of four CD18 mutants in leucocyte adhesion deficient (LAD) patients with differential capacities to support expression and function of the CD11/CD18 integrins LFA-1, Mac-1 and p150,95.Clin Exp Immunol2001;126:311-8 PMCID:PMC1906209

[36]

Back AL,Baker D,Embree LJ.A point mutation associated with leukocyte adhesion deficiency type 1 of moderate severity.Biochem Biophys Res Commun1993;193:912-8

[37]

Li L,Cao RM.A novel point mutation in CD18 causing leukocyte adhesion deficiency in a Chinese patient.Chin Med J (Engl).2010;123:1278-82

[38]

Bruno DL,Amor DJ,Butler K,Francis D,Hills L,O'Rielly D,Savarirayan R,Salce N.Extending the scope of diagnostic chromosome analysis: detection of single gene defects using high-resolution SNP microarrays.Hum Mutat2011;32:1500-6

[39]

Kishimoto TK,Springer TA.Leukocyte adhesion deficiency.Aberrant splicing of a conserved integrin sequence causes a moderate deficiency phenotype. J Biol Chem1989;264:3588-95

[40]

Wright AH,Taylor GM,Higgins D,Law SK.Molecular characterization of leukocyte adhesion deficiency in six patients.Eur J Immunol1995;25:717-22

[41]

Fathallah DM,Barbouche MR,Hariz MB.Two novel frame shift, recurrent and de novo mutations in the ITGB2 (CD18) gene causing leukocyte adhesion deficiency in a highly inbred North African population.J Biomed Biotechnol2001;1:114-21 PMCID:PMC129056

[42]

Hixson P,Shurin SB.Unique CD18 mutations involving a deletion in the extracellular stalk region and a major truncation of the cytoplasmic domain in a patient with leukocyte adhesion deficiency type 1.Blood2004;103:1105-13

[43]

Fiorini M,Facchetti F,Alessandri G,Caruso A,Ugazio AG,Badolato R.Defective migration of monocyte-derived dendritic cells in LAD-1 immunodeficiency.J Leukoc Biol2002;72:650-6

[44]

Roos D,de Boer M,Weening RS,Tezcan I,Law SK.Genetic analysis of patients with leukocyte adhesion deficiency: genomic sequencing reveals otherwise undetectable mutations.Exp Hematol2002;30:252-61

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