Revised phylogeny of the Inula complex group (Asteraceae: Inuleae) with a recircumscription of Carpesium and establishment of a new genus Cladocarpesium

Qun Liu , Nan Lin , Dai-Gui Zhang , Xian-Han Huang , Yan-Bo Li , Ying-Ying Zheng , Umida Tojiboeva , Jian-Wen Zhang , Tao Deng

Journal of Systematics and Evolution ›› 2026, Vol. 64 ›› Issue (1) : 95 -105.

PDF
Journal of Systematics and Evolution ›› 2026, Vol. 64 ›› Issue (1) :95 -105. DOI: 10.1111/jse.70012
Research Article
Revised phylogeny of the Inula complex group (Asteraceae: Inuleae) with a recircumscription of Carpesium and establishment of a new genus Cladocarpesium
Author information +
History +
PDF

Abstract

Carpesium (Asteraceae) represents the largest Asian genus within the subtribe Inulinae of the tribe Inuleae, exhibiting maximum species diversity in China. This study presents the first comprehensive phylogenetic analysis of Carpesium, utilizing nuclear ribosomal internal transcribed spacer (ITS), specific chloroplast DNA sequences (rps16-trnQ, rpl32-trnL, and ndhF-rpl32), whole chloroplast genomes and chloroplast coding sequence (CDS). The results demonstrate that Carpesium, excluding C. abrotanoides, constitutes a monophyletic group. The Carpesium s.str. clade contains two well-supported lineages with distinct morphological characteristics. Based on morphological analyses, molecular phylogenetic evidence, and karyotypic studies, this research establishes Cladocarpesium gen. nov. to accommodate C. abrotanoides. The comprehensive sampling approach has facilitated a thorough phylogenetic reconstruction of the Inula complex, establishing a robust systematic framework that clarifies previously uncertain relationships among constituent species. This multilocus methodology provides essential insights for reassessing infrageneric classifications within this taxonomically complex group.

Keywords

Asteraceae / Carpesium / Cladocarpesium / Inuleae / molecular phylogeny

Cite this article

Download citation ▾
Qun Liu, Nan Lin, Dai-Gui Zhang, Xian-Han Huang, Yan-Bo Li, Ying-Ying Zheng, Umida Tojiboeva, Jian-Wen Zhang, Tao Deng. Revised phylogeny of the Inula complex group (Asteraceae: Inuleae) with a recircumscription of Carpesium and establishment of a new genus Cladocarpesium. Journal of Systematics and Evolution, 2026, 64(1): 95-105 DOI:10.1111/jse.70012

登录浏览全文

4963

注册一个新账户 忘记密码

References

[1]

Allan GJ, Clark C, Rieseberg LH. 1997. Distribution of parental DNA markers in Encelia virginensis (Asteraceae: Heliantheae), a diploid species of putative hybrid origin. Plant Systematics and Evolution 205: 205-221.

[2]

Anderberg AA. 1989. Phylogeny and reclassification of the tribe Inuleae (Asteraceae). Canadian Journal of Botany 67: 2277-2296.

[3]

Anderberg AA. 1991a. Taxonomy and phylogeny of the tribe Inuleae (Asteraceae). Plant Systematics and Evolution 176: 75-123.

[4]

Anderberg AA. 1991b. Taxonomy and phylogeny of the tribe Plucheeae (Asteraceae). Plant Systematics and Evolution 176: 145-177.

[5]

Anderberg AA. 2009. Inuleae. In: VA Funk, A Susanna, TF Stuessy, RJ Bayer, eds. Systematics, evolution and biogeography of Compositae. Washington DC: Smithsonian. 667-680.

[6]

Anderberg AA, Eldenas P, Bayer RJ, Englund M. 2005. Evolutionary relationships in the Asteraceae tribe Inuleae (incl. Plucheeae) evidenced by DNA sequences of ndhF; with notes on the systematic positions of some aberrant genera. Organisms Diversity & Evolution 5: 135-146.

[7]

Andrews S. 2010. FastQC: A quality control tool for high throughput sequence data, Babraham Bioinformatics. Cambridge: Babraham Institute.

[8]

Applequist WL. 2013. Report of the Nomenclature Committee for Vascular Plants: 65. Taxon 62: 1315-1326.

[9]

Aytac Z, Anderberg AA. 2001. A new species of Chrysophthalmum Schultz Bip. (Asteraceae-Inuleae) from Turkey. Botanical Journal of the Linnean Society 137: 211-214.

[10]

Bui QM, Heiko AS, Olga C, Dominik S, Michael DW, Arndt VH, Robert L. 2020. IQ-TREE 2: New models and efficient methods for phylogenetic inference in the genomic era. Molecular Biology and Evolution 37: 1530-1534.

[11]

Bremer K. 1987. Tribal interrelationships of the Asteraceae. Cladistics 3: 210-253.

[12]

Chen FH, Hu QM. 1974. A report of some new species of the genus Carpesium from western China. Acta Phytotaxonmica Sinica 12: 487-500.

[13]

Cho YH. 1991. Karyotype analysis of eight species and one variety of Carpesium (Compositae) in Japan. Journal of Japan Botany 66: 26-34.

[14]

Chen YS, Anderberg AA. 2011. Inuleae. In: ZY Wu, PH Raven, DY Hong, eds, Flora of China Volume 20–21 (Asteraceae). Beijing: Science Press; St. Louis: Missouri Botanical Garden Press. 820-850.

[15]

Dunja K, Lana Z, Bojan Z. 2016. Carpological and receptacular morpho-anatomical characters of Inula, Dittrichia, Limbarda and Pulicaria species (Compositae, Inuleae): Taxonomic implications. Flora 219: 48-61.

[16]

Englund M, Pornpongrungrueng P, Gustafsson M, Anderberg A. 2009. Phylogenetic relationships and generic delimitation in Inuleae subtribe Inulinae (Asteraceae) based on ITS and cpDNA sequence data. Cladistics 25: 319-352.

[17]

Eldenas P, Anderberg AA, Kallersjo M. 1998. Molecular phylogenetics of the tribe Inuleae s. str. (Asteraceae), based on ITS sequences of nuclear ribosomal DNA. Plant Systematics and Evolution 210: 159-173.

[18]

Eldenas P, Kallersjo M, Anderberg AA. 1999. Phylogenetic placement and circumscription of tribes Inuleae s. str. and Plucheeae (Asteraceae): Evidence from sequences of chloroplast gene ndhF. Molecular Phylogenetics and Evolution 13: 50-58.

[19]

Gutiérrez-Larruscain D, Santos-Vicente M, Anderberg AA, Rico E, Martínez-Ortega MM. 2018. Phylogeny of the Inula group (Asteraceae: Inuleae): Evidence from nuclear and plastid genomes and a recircumscription of Pentanema. Taxon 67: 149-164.

[20]

Grenier J, Godron DA. 1850. Flore de France. London: Besançon. 2.

[21]

Hall TA. 1999. BioEdit: A user-friendly biological sequence alignment and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41: 95-98.

[22]

Jin JJ, Yu WB, Yang JB, Song Y, dePamphilis CW, Yi TS, Li DZ. 2020. GetOrganelle: A fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biology 21: 241.

[23]

Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: Improvements in performance and usability. Molecular Biology and Evolution 30: 772-780.

[24]

Kim K. 2007. Carpesium L. In: The genera of vascular plants of Korea. Seoul: Academy Publishing Press. 997-998.

[25]

Ling R. 1997. Carpesium L. In: 编者组:FRPS, ed, Flora Reipublicae Popularis. Beijing: Science Press. 75: 293-313.

[26]

Mark EW, Loren HR. 2002. Habitat divergence between a homoploid hybrid sunflower species, Helianthus paradoxus (Asteraceae), and its progenitors. American Journal of Botany 89: 472-478.

[27]

Matthew K, Richard M, Amy W, Steven S-H, Matthew C, Shane S, Simon B, Alex C, Sidney M, Chris D, Tobias T, Bruce A, Peter M, Alexei D. 2012. Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28: 1647-1649.

[28]

Nishikawa T. 1978. Chromosome counts of flowering plants of Hokkaido (1). Report Taisetsuzan Institute of Science 13: 13-19.

[29]

Nylander J. 2004. MrModeltest v2. C program for selecting DNA substitution models using PAUP*. Systematic Zoology, EBC, Uppsala University. Available from: http://paup.csit.fsu.edu

[30]

Nylinder S, Anderberg AA. 2015. Phylogeny of the tribe Inuleae (Asteraceae) with special emphasis on the Inuleae-Plucheinae. Taxon 64: 110-130.

[31]

Pornpongrungrueng P, Borchsenius F, Englund M, Anderberg AA, Gustafsson M. 2007. Phylogenetic relationships in Blumea (Asteraceae: Inuleae) as evidenced by molecular and morphological data. Plant Systematics and Evolution 269: 223-243.

[32]

Reichenbach HG. 1853. (“1854”). Icones florae germanicae et helveticae. In: Lipsiae [Leipzig]: Sumptibus Ambrosii Abel. 16. https://doi.org/10.5962/bhl.title.6353.

[33]

Rice A, Glick L, Abadi S, Einhorn M, Kopelman NM, Salman-Minkov A, Mayzel J, Chay O, Mayrose I. 2015. The chromosome counts database (CCDB)—a community resource of plant chromosome numbers. New Phytologist 206: 19-26.

[34]

Ronquist F, Teslenko M, Mark P, Ayres D, Darling A, Höhna S, Larget B, Liu L, Suchard M, Huelsenbeck J. 2012. MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539-542.

[35]

Santos-Vicente M, Martínez-Ortega MM, Rico E. 2012. Proposal to conserve the name Inula (Asteraceae) with a conserved type. Taxon 61: 1331-1332.

[36]

Schur P. 1866. Enumeratio plantarum Transsilvaniae. Vindobonae [Vienna]: Apud Guilielmum Braumüller. https://doi.org/10.5962/bhl.title.9958

[37]

Siri F, Marte HJ, Mari K, Liv B. 2009. A molecular study of hybridization and homoploid hybrid speciation in Argyranthemum (Asteraceae) on Tenerife, the Canary Islands. Botanical Journal of the Linnean Society 159: 19-31.

[38]

Sun WG, Ma XG, Zhang JW, Su FM, Zhang YH, Li ZM. 2017. Karyotypes of nineteen species of Asteraceae in the Hengduan Mountains and adjacent regions. Plant Diversity 39: 194-201.

[39]

Xu YL, Zhang HW, Lu YF. 2021. Carpesium zhejiangense (Asteraceae, Trib. Inuleae), a new species from Zhejiang. Journal of Hangzhou Normal University (Natural Science Edition) 20: 262-268.

[40]

Yoo KP, Park SJ. 2012. A phylogenetic study of Korean Carpesium L. based on nrDNA ITS sequences. Korean Journal of Plant Resources 25: 96-104.

[41]

Zhang YZ, Deng T, Li YB, Zhang XS, Tojibaev K, Zhang JW, Sun H. 2018. Taxonomic revision of Carpesium linearibracteatum (Asteraceae: Inulinae) from China. Phytotaxa 371: 111-118.

RIGHTS & PERMISSIONS

2025 The Author(s). Journal of Systematics and Evolution published by John Wiley & Sons Australia, Ltd on behalf of Institute of Botany, Chinese Academy of Sciences.

PDF

5

Accesses

0

Citation

Detail

Sections
Recommended

/