Flux Ratios for Effects of Permanent Charges on Ionic Flows with Three Ion Species: Case Study (II)

Ning Sun , Weishi Liu

Journal of Mathematical Study ›› 2024, Vol. 57 ›› Issue (1) : 1 -23.

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Journal of Mathematical Study ›› 2024, Vol. 57 ›› Issue (1) :1 -23. DOI: 10.4208/jms.v57n1.24.01
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Flux Ratios for Effects of Permanent Charges on Ionic Flows with Three Ion Species: Case Study (II)
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Abstract

In this paper, we study effects of permanent charges on ion flows through membrane channels via a quasi-one-dimensional classical Poisson-Nernst-Planck sys- tem. This system includes three ion species, two cations with different valences and one anion, and permanent charges with a simple structure, zeros at the two end re- gions and a constant over the middle region. For small permanent charges, our main goal is to analyze the effects of permanent charges on ionic flows, interacting with the boundary conditions and channel structure. Continuing from a previous work, we investigate the problem for a new case toward a more comprehensive understanding about effects of permanent charges on ionic fluxes.

Keywords

Ionic flows / permanent charges / flux ratios

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Ning Sun, Weishi Liu. Flux Ratios for Effects of Permanent Charges on Ionic Flows with Three Ion Species: Case Study (II). Journal of Mathematical Study, 2024, 57(1): 1-23 DOI:10.4208/jms.v57n1.24.01

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Acknowledgements

The authors thank the reviewers for their comments and suggestions that improve the manuscript. Ning Sun was partially supported by the Joint Ph.D. Training Program sponsored by the China Scholarship Council, a Graduate Innovation Fund of Jilin University and National Natural Science Foundation of China (No. 12301220). Weishi Liu was partially supported by Simons Foundation Mathematics and Physical Sciences-Collaboration Grants for Mathematicians 581822.

References

[1]

Abaid N, Eisenberg R S, LiuW. Asymptotic expansions of I-V relations via a Poisson-Nernst-Planck system. SIAM J. Appl. Dyn. Syst., 2008, 7: 1507-1526.

[2]

Barcilon V. Ion flow through narrow membrane channels: Part I. SIAM J. Appl. Math., 1992, 52: 1391-1404.

[3]

Barcilon V, Chen D, Eisenberg R. Ion flow through narrow membrane channels: Part II. SIAM J. Appl. Math., 1992, 52: 1405-1425.

[4]

Barcilon V, Chen D, Eisenberg R, et al. Qualitative properties of steady-state Poisson-Nernst-Planck systems: Perturbation and simulation study. SIAM J. Appl. Math., 1997, 57: 631-648.

[5]

Bates P, Wen Z, Zhang M. Small permanent charge effects on individual fluxes via Poisson¨CNernst¨CPlanck models with multiple cations. J. Nonlinear Sci., https://doi.org/10.1007/s00332-021-09715-3.

[6]

Bazant M, Chu K, Bayly B. Current-Voltage relations for electrochemical thin films. SIAM J. Appl. Math., 2005, 65: 1463-1484.

[7]

Bezanilla F. The voltage sensor in voltage-dependent ion channels. Phys. Rev., 2000, 80: 555-592.

[8]

Bikerman J J. Structure and capacity of the electrical double layer. Philos. Mag., 1942, 33: 384-397.

[9]

Chen D P, Eisenberg R S. Charges, currents and potentials in ionic channels of one conformation. Biophys. J., 1993, 64: 1405-1421.

[10]

Chen J, Wang Y, Zhang L, et al. Mathematical analysis of Poisson-Nernst-Planck models with permanent charges and boundary layers: studies on individual fluxes. Nonlinearity, 2021, 34(6): 3879-3906.

[11]

Eisenberg R S.Channels as enzymes: oxymoron and taytology. J. Memb. Biol., 1990, 115: 1-12.

[12]

Eisenberg B. Ion channels as devices. J. Comp. Electro., 2003, 2: 245-249.

[13]

Eisenberg B. Proteins, channels, and crowded Ions. Biophys. Chem., 2003, 100: 507-517.

[14]

Eisenberg B. Ions in fluctuating channels: transistors alive. Fluctuation and Noise Letters, 2012, 11: 1240001

[15]

Eisenberg B, Hyon Y, Liu C. Energy variational analysis of ions in water and channels: Field theory for primitive models of complex ionic fluids. J. Chem. Phys., 2010, 133(1-23): 104104.

[16]

Eisenberg B, Liu W. Poisson-Nernst-Planck systems for ion channels with permanent charges. SIAM J. Math. Anal., 2007, 38: 1932-1966.

[17]

Eisenberg B, Liu W, Xu H. Reversal permanent charge and reversal potential: case studies via classical Poisson-Nernst-Planck models. Nonlinearity, 2015, 28: 103-128.

[18]

Gillespie D, Nonner W, Eisenberg R S. Coupling Poisson-Nernst-Planck and density func-tional theory to calculate ion flux. J. Phys.: Condens. Matter, 2002, 14: 12129-12145.

[19]

Gillespie D, Nonner W, Eisenberg R S. Density functional theory of charged, hard-sphere fluids. Phys. Rev. E, 2003, 68(1-10): 0313503.

[20]

Gillespie D, Nonner W, Eisenberg R S. Crowded charge in biological ion channels. Nan-otech., 2003, 3: 435-438.

[21]

Hille B. Ion Channels of Excitable Membranes(3rd ed). Sinauer Associates Inc., 2001.

[22]

Hodgkin A L. The ionic basis of electrical activity in nerve and muscle. Biol. Rev., 1951, 26: 339- 409.

[23]

Hodgkin A L, Huxley A F. Currents carried by sodium and potassium ions through the membrane of the giant axon of Loligo. J. Physol., 1952, 116: 449-472.

[24]

Hodgkin A L, Huxley A F, Katz B. Ionic currents underlying activity in the giant axon of the squid. Arch. Sci. Physiol., 1949, 3: 129-150.

[25]

Hodgkin A L, Katz B. The effect of sodium ions on the electrical activity of the giant axon of the squid. J. Physiol., 1949, 108: 37-77.

[26]

Hodgkin A L, Keynes R. The potassium permeability of a giant nerve fibre. J. Physiol., 1955, 128: 61-88.

[27]

Huang W, Liu W, Yu Y. Permanent charge effects on ionic flow: a numerical study of flux ratios and their bifurcation. Commun. Comput. Phys., 2021, 30: 486-514.

[28]

Hyon Y, Eisenberg B, Liu C. A mathematical model for the hard sphere repulsion in ionic solutions. Commun. Math. Sci., 2010, 9: 459-475.

[29]

Im W, Beglov D, Roux B. Continuum solvation model: Electrostatic forces from numerical solutions to the Poisson-Boltzmann equation. Comp. Phys. Comm., 1998, 111: 59-75.

[30]

Im W, Roux B. Ion permeation and selectivity of OmpF porin: a theoretical study based on molecular dynamics, Brownian dynamics, and continuum electrodiffusion theory. J. Mol. Biol., 2002, 322: 851-869.

[31]

Ji S, Eisenberg B, Liu W. Flux ratios and channel structures. J. Dynam. Differ. Eq., 2019, 31: 1141-1183.

[32]

Ji S, Liu W. Poisson-Nernst-Planck systems for ion flow with density functional theory for hard-sphere potential: I-V relations and critical potentials. Part I: Analysis. J. Dynam. Differ. Eq., 2012, 24: 955-983.

[33]

Ji S, Liu W, Zhang M. Effects of (small) permanent charge and channel geometry on ionic flows via classical Poisson-Nernst-Planck models. SIAM J. Appl. Math., 2015, 75: 114-135.

[34]

Kilic M S, Bazant M Z, Ajdari A.Steric effects in the dynamics of electrolytes at large applied voltages. II. Modified Poisson-Nernst-Planck equations. Phys. Rev. E, 2007, 75(1-11): 021503.

[35]

Li B. Continuum electrostatics for ionic solutions with non-uniform ionic sizes. Nonlinearity, 2009: 811-833.

[36]

Lin G, Liu W, Yi Y, et al. Poisson-Nernst-Planck systems for ion flow with a local hard-sphere potential for ion size effects. SIAM J. Appl. Dyn. Syst., 2013, 12: 1613-1648.

[37]

Liu J-L, Eisenberg B. Molecular mean-field theory of ionic solutions: a Poisson-Nernst-Planck-Bikerman model. Entropy, 2020, 22(5): 550.

[38]

Liu J-L, Xie D, Eisenberg B.Poisson-Fermi formulation of nonlocal electrostatics in elec-trolyte solutions. Mol. Based Math. Biol., 2017, 5: 116-124.

[39]

Liu W. Geometric singular perturbation approach to steady-state Poisson-Nernst-Planck systems. SIAM J. Appl. Math., 2005, 65: 754-766.

[40]

Liu W. One-dimensional steady-state Poisson-Nernst-Planck systems for ion channels with multiple ion species. J. Differ. Eq., 2009, 246: 428-451.

[41]

Liu W. A flux ratio and a universal property of permanent charges effects on fluxes. Comput. Math. Biophys., 2018, 6: 28-40.

[42]

Liu W, Tu X, Zhang M. Poisson-Nernst-Planck systems for ion flow with density functional theory for hard-sphere potential: I-V relations and critical potentials. Part II: Numerics. J. Dynam. Differ. Eq., 2012, 24: 985-1004.

[43]

Liu W, Wang B.Poisson-Nernst-Planck systems for narrow tubular-like membrane channels. J. Dynam. Differ. Eq., 2010, 22: 413-437.

[44]

Liu W, Xu H. A complete analysis of a classical Poisson-Nernst-Planck model for ionic flow. J. Differ. Eq., 2015, 258: 1192-1228.

[45]

Mofidi H, Eisenberg B, Liu W. Effects of diffusion coefficients and permanent charge on reversal potentials in ionic channels. Entropy, 2020, 22(1-23): 325.

[46]

Mofidi H, Liu W. Reversal potential and reversal permanent charge with unequal diffusion coefficients via classical Poisson-Nernst-Planck models. SIAM J. Appl. Math., 2020, 80: 1908-1935.

[47]

Nonner W, Eisenberg R S. Ion permeation and glutamate residues linked by Poisson-Nernst-Planck theory in L-type calcium channels. Biophys J, 1998, 75: 1287-1305.

[48]

Park J-K, Jerome J W. Qualitative properties of steady-state Poisson-Nernst-Planck systems: Mathematical study. SIAM J. Appl. Math., 1997, 57: 609-630.

[49]

Rosenfeld Y. Free-energy model for the inhomogeneous hard-sphere fluid mixture and Density-Functional theory of freezing. Phys. Rev. Lett., 1989, 63: 980-983.

[50]

Rosenfeld Y. Free energy model for the inhomogeneous fluid mixtures: Yukawa-charged hard spheres, general interactions, and plasmas. J. Chem. Phys., 1993, 98: 8126-8148.

[51]

Rubinstein I. Electro-Diffusion of Ions. SIAM Studies Appl. Math., 1990, 11: 203-249.

[52]

Sakmann B, Neher E. Single Channel Recording ( 2nd Ed.). Plenum, 1995.

[53]

Schmidt M, Löwen H, Brader J M, et al. Density functional theory for a model colloid-polymer mixture: Bulk fluid phases. J. Phys.: Condens. Matter, 2002, 14: 9353-9382.

[54]

Singer A, Norbury J. A Poisson-Nernst-Planck model for biological ion channels-an asymp-totic analysis in a three-dimensional narrow funnel. SIAM J. Appl. Math., 2009, 70: 949-968.

[55]

Singer A, Gillespie D, Norbury J, et al. Singular perturbation analysis of the steady-state Poisson-Nernst-Planck system: applications to ion channels. European J. Appl. Math., 2008, 19: 541-560.

[56]

Sun L, Liu W. Non-localness of excess potentials and boundary value problems of Poisson-Nernst-Planck systems for ionic flow: a case study. J. Dynam. Differ. Eq., 2018, 30: 779-797.

[57]

Sun N, Liu W. Flux ratios for effects of permanent charges on ionic flows with three ion species: New phenomena from a case study. J. Dynam. Differ. Eq., 2024, 36: 27-62.

[58]

Tarazona P, Rosenfeld Y. From zero-dimension cavities to free-energy functionals for hard disks and hard spheres. Phys. Rev. E, 1997, 55: R4873-R4876.

[59]

Ussing H H. The distinction by means of tracers between active transport and diffusion. Acta Physiol. Scand., 1949, 19: 43-56.

[60]

Ussing H H. Interpretation of the exchange of radio-sodium in isolated muscle. Nature, 1947, 160: 262-263.

[61]

Wang X-S, He D, Wylie J, et al. Singular perturbation solutions of steady-state Pois-sonCNernstCPlanck systems. Phys. Rev. E, 2014, 89: 022722.

[62]

Wei G-W, Zheng Q, Chen Z, et al. Variational multiscale models for charge transport. SIAM Rev., 2012, 54: 699-754.

[63]

Wen Z, Zhang L, Zhang M. Dynamics of classical Poisson-Nernst-Planck systems with mul-tiple cations and boundary layers. J. Dynam. Differ. Eq., 2021, 33: 211-234.

[64]

Yan L, Xu H, Liu W. Poisson-Nernst-Planck models for three ion species: Monotonic profiles vs. oscillatory profiles. J. Appl. Anal. Comput., 2022, 12: 1211-1233.

[65]

Zhang L, Eisenberg B, Liu W. An effect of large permanent charge: decreasing flux with increasing transmembrane potential. Eur. Phys. J. Special Topics, 2019, 227: 2575-2601.

[66]

Zhang L, Liu W. Effects of large permanent charges on ionic flows via Poisson-Nernst-Planck models. SIAM J. Appl. Dyn. Syst., 2020, 19: 1993-2029.

[67]

Zhang M. Competition between cations via classical Poisson-Nernst-Planck models with nonzero but small permanent charges. Membranes, 2021, 11(4): 236.

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