Thinning intensity affects microbial functional diversity and enzymatic activities associated with litter decomposition in a Chinese fir plantation

Wenya Xiao , Fei Fei , Jiaojiao Diao , Bin J. W. Chen , Qingwei Guan

Journal of Forestry Research ›› 2017, Vol. 29 ›› Issue (5) : 1337 -1350.

PDF
Journal of Forestry Research ›› 2017, Vol. 29 ›› Issue (5) : 1337 -1350. DOI: 10.1007/s11676-017-0536-y
Original Paper

Thinning intensity affects microbial functional diversity and enzymatic activities associated with litter decomposition in a Chinese fir plantation

Author information +
History +
PDF

Abstract

Microbial functional diversity and enzymatic activities are critical to maintaining material circulation during litter decomposition in forests. Thinning, an important and widely used silvicultural treatment, changes the microclimate and promotes forest renewal. However, how thinning affects microbial functional diversity and enzymatic activities during litter decomposition remains poorly understood. We conducted thinning treatments in a Chinese fir plantation in a subtropical region of China with four levels of tree stem removal (0, 30, 50, and 70%), each with three replicates, and the effects of thinning on microbial functional diversity and enzymatic activities were studied 7 years after treatment by collecting litter samples four times over a 1-year period. Microbial functional diversity and enzymatic activities were analyzed using Biolog Ecoplates (Biolog Inc., Hayward, CA, USA) based on the utilization of 31 carbon substrates. Total microbial abundance during litter decomposition was lower after the thinning treatments than without thinning. Microbial functional diversity did not differ significantly during litter decomposition, but the types of microbial carbon-source utilization did differ significantly with the thinning treatments. Microbial cellulase and invertase activities during litter decomposition were significantly higher under the thinning treatments due to changes in the litter carbon concentration and the ratios of carbon and lignin to nitrogen. The present study demonstrated the important influence of thinning on microbial activities during litter decomposition. Moderate-intensity thinning may maximize vegetation diversity and, in turn, increase the available substrate sources for microbial organisms in litter and promote nutrient cycling in forest ecosystems.

Keywords

Biology technology / Litter decomposition / Microbial enzymatic activities / Shannon diversity index

Cite this article

Download citation ▾
Wenya Xiao, Fei Fei, Jiaojiao Diao, Bin J. W. Chen, Qingwei Guan. Thinning intensity affects microbial functional diversity and enzymatic activities associated with litter decomposition in a Chinese fir plantation. Journal of Forestry Research, 2017, 29(5): 1337-1350 DOI:10.1007/s11676-017-0536-y

登录浏览全文

4963

注册一个新账户 忘记密码

References

[1]

Aber JD. Nitrogen cycling and nitrogen saturation in temperate forest ecosystems. Trends Ecol Evol, 1992, 7(7): 220-224.

[2]

Adamczyk B, Kilpeläinen P, Kitunen V, Smolander A. Potential activities of enzymes involved in N, C, P and S cycling in boreal forest soil under different tree species. Pedobiologia, 2014, 57(2): 97-102.

[3]

Adamczyk B, Adamczyk S, Kukkola M, Tamminen P, Smolander A. Logging residue harvest may decrease enzymatic activity of boreal forest soils. Soil Biol Biochem, 2015, 82: 74-80.

[4]

Alarcón-Gutiérrez E, Floch C, Augur C, Petit JL, Ziarelli F, Criquet S. Spatial variations of chemical composition, microbial functional diversity, and enzyme activities in a Mediterranean litter (Quercus ilex L.) profile. Pedobiologia, 2009, 52(6): 387-399.

[5]

Allison SD, Vitousek PM. Extracellular enzyme activities and carbon chemistry as drivers of tropical plant litter decomposition. Biotropica, 2004, 36(3): 285-296.

[6]

Andersen R, Chapman SJ, Artz RRE. Microbial communities in natural and disturbed peatlands: a review. Soil Biol Biochem, 2013, 57: 979-994.

[7]

Andersson M, Kjøller A, Struwe S. Microbial enzyme activities in leaf litter, humus and mineral soil layers of European forests. Soil Biol Biochem, 2004, 36(10): 1527-1537.

[8]

Artigas J, Majerholc J, Foulquier A, Margoum C, Volat B, Neyra M, Pesce S. Effects of the fungicide tebuconazole on microbial capacities for litter breakdown in streams. Aquat Toxicol, 2012, 122–123: 197-205.

[9]

Baldrian P, Kolarik M, Stursova M, Kopecky J, Valaskova V, Vetrovsky T, Zifcakova L, Snajdr J, Ridl J, Vlcek C, Voriskova J. Active and total microbial communities in forest soil are largely different and highly stratified during decomposition. ISME J, 2012, 6(2): 248-258.

[10]

Bardgett RD, Jones AC, Jones DL, Kemmitt SJ, Cook R, Hobbs PJ. Soil microbial community patterns related to the history and intensity of grazing in sub-montane ecosystems. Soil Biol Biochem, 2001, 33(12–13): 1653-1664.

[11]

Bartelt-Ryser J, Joshi J, Schmid B, Brandl H, Balser T. Soil feedbacks of plant diversity on soil microbial communities and subsequent plant growth. Perspect Plant Ecol Evol Syst, 2005, 7(1): 27-49.

[12]

Bates D, Bolker B, Walker S, Christensen RHB, Singmann H, Dai B, Grothendieck G (2016) lme4: linear mixed-effects models using Eigen and S4. R package version 1 (1.1 − 12)

[13]

Berga M, Szekely AJ, Langenheder S. Effects of disturbance intensity and frequency on bacterial community composition and function. PLoS ONE, 2012 7 5 e36959

[14]

Blanco JA, Imbert JB, Castillo FJ. Influence of site characteristics and thinning intensity on litterfall production in two Pinus sylvestris L. forests in the western Pyrenees. For Ecol Manag, 2006, 237(1–3): 342-352.

[15]

Boerner R, Giai C, Huang J, Miesel J. Initial effects of fire and mechanical thinning on soil enzyme activity and nitrogen transformations in eight North American forest ecosystems. Soil Biol Biochem, 2008, 40(12): 3076-3085.

[16]

Bolat İ. The effect of thinning on microbial biomass C, N and basal respiration in black pine forest soils in Mudurnu, Turkey. Eur J For Res, 2013, 133(1): 131-139.

[17]

Bowman WD, Steltzer H, Rosenstiel TN, Cleveland CC, Meier CL. Litter effects of two co-occurring alpine species on plant growth, microbial activity and immobilization of nitrogen. Oikos, 2004, 104: 336-344.

[18]

Bray SR, Kitajima K, Mack MC. Temporal dynamics of microbial communities on decomposing leaf litter of 10 plant species in relation to decomposition rate. Soil Biol Biochem, 2012, 49: 30-37.

[19]

Bundschuh M, Zubrod JP, Kosol S, Maltby L, Stang C, Duester L, Schulz R. Fungal composition on leaves explains pollutant-mediated indirect effects on amphipod feeding. Aquat Toxicol, 2011, 104(1–2): 32-37.

[20]

Chen XL, Wang D, Chen X, Wang J, Diao JJ, Zhang JY, Guan QW. Soil microbial functional diversity and biomass as affected by different thinning intensities in a Chinese fir plantation. Appl Soil Ecol, 2015, 92: 35-44.

[21]

Chen XL, Chen HYH, Chen X, Wang J, Chen B, Wang D, Guan QW. Soil labile organic carbon and carbon-cycle enzyme activities under different thinning intensities in Chinese fir plantations. Appl Soil Ecol, 2016, 107: 162-169.

[22]

Cleveland CC, Reed SC, Keller AB, Nemergut DR, O’Neill SP, Ostertag R, Vitousek PM. Litter quality versus soil microbial community controls over decomposition: a quantitative analysis. Oecologia, 2014, 174(1): 283-294.

[23]

Cookson WR, O’Donnell AJ, Grant CD, Grierson PF, Murphy DV. Impact of ecosystem management on microbial community level physiological profiles of postmining forest rehabilitation. Microb Ecol, 2008, 55(2): 321-332.

[24]

Creamer CA, de Menezes AB, Krull ES, Sanderman J, Newton-Walters R, Farrell M. Microbial community structure mediates response of soil C decomposition to litter addition and warming. Soil Biol Biochem, 2015, 80: 175-188.

[25]

Deng SP, Tabatabai MA. Cellulase activity of soils. Soil Biol Biochem, 1994, 26(10): 1347-1354.

[26]

Dong WY, Zhang XY, Liu XY, Fu XL, Chen FS, Wang HM, Sun XM, Wen XF. Responses of soil microbial communities and enzyme activities to nitrogen and phosphorus additions in Chinese fir plantations of subtropical China. Biogeosci Discuss, 2015, 12(13): 10359-10387.

[27]

Fanin N, Hättenschwiler S, Barantal S, Schimann H, Fromin N. Does variability in litter quality determine soil microbial respiration in an Amazonian rainforest?. Soil Biol Biochem, 2011, 43(5): 1014-1022.

[28]

Fernandez D, Voss K, Bundschuh M, Zubrod JP, Schafer RB. Effects of fungicides on decomposer communities and litter decomposition in vineyard streams. Sci Total Environ, 2015, 533: 40-48.

[29]

Fioretto A, Papa S, Pellegrino A, Fuggi A. Decomposition dynamics of Myrtus communis and Quercus ilex leaf litter: mass loss, microbial activity and quality change. Appl Soil Ecol, 2007, 36(1): 32-40.

[30]

Floudas D, Binder M, Riley R, Barry K, Blanchette RA, Henrissat B, Martínez AT, Otillar R, Spatafora JW, Yadav JS, Aerts A, Benoit I, Boyd A, Carlson A, Copeland A, Coutinho PM, de Vries RP, Ferreira P, Findley K, Foster B, Gaskell J, Glotzer D, Górecki P, Heitman J, Hesse C, Hori C, Igarashi K, Jurgens JA, Kallen N, Kersten P, Kohler A, Kües U, Kumar TKA, Kuo A, LaButti K, Larrondo LF, Lindquist E, Ling A, Lombard V, Lucas S, Lundell T, Martin R, McLaughlin DJ, Morgenstern I, Morin E, Murat C, Nagy LG, Nolan M, Ohm RA, Patyshakuliyeva A, Rokas A, Ruiz-Dueñas FJ, Sabat G, Salamov A, Samejima M, Schmutz J, Slot JC, St. John F, Stenlid J, Sun H, Sun S, Syed K, Tsang A, Wiebenga A, Young D, Pisabarro A, Eastwood DC, Martin F, Cullen D, Grigoriev IV, Hibbett DS. The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science, 2012, 336(6089): 1715-1719.

[31]

Food and Agriculture Organization of the United Nations. World reference base for soil resources 2006-A framework for international classification, correlation and communication, 2006, Rome: Food and Agriculture Organization of the United Nations.

[32]

Garland JL. Analytical approaches to the characterization of samples of microbial communities using patterns of potential C source utilization. Soil Biol Biochem, 1996, 28: 213-221.

[33]

Geng Y, Dighton J, Gray D. The effects of thinning and soil disturbance on enzyme activities under pitch pine soil in New Jersey Pinelands. Appl Soil Ecol, 2012, 62: 1-7.

[34]

Griffiths BS, Ritz K, Wheatley R, Kuan HL, Boag B, Christensen S, Ekelund F, Sørensen SJ, Muller S, Bloem J. An examination of the biodiversity-ecosystem function relationship in arable soil microbial communities. Soil Biol Biochem, 2001, 33(12–13): 1713-1722.

[35]

Hassett JE, Zak DR. Aspen harvest intensity decreases microbial biomass, extracellular enzyme activity, and soil nitrogen cycling. Soil Sci Soc Am J, 2005, 69: 227-235.

[36]

Herman J, Moorhead D, Berg B. The relationship between rates of lignin and cellulose decay in aboveground forest litter. Soil Biol Biochem, 2008, 40(10): 2620-2626.

[37]

Holden SR, Gutierrez A, Treseder KK. Changes in soil fungal communities, extracellular enzyme activities, and litter decomposition across a fire chronosequence in Alaskan boreal forests. Ecosystems, 2013, 16: 34-46.

[38]

Huang ZQ, He ZM, Wan XH, Hu ZH, Fan SH, Yang YS. Harvest residue management effects on tree growth and ecosystem carbon in a Chinese fir plantation in subtropical China. Plant Soil, 2012, 364(1–2): 303-314.

[39]

Kaye JP, Hart SC. Competition for nitrogen between plants and soil microorganisms. Trends Ecol Evol, 1997, 12(4): 139-143.

[40]

Keeler BL, Hobbie SE, Kellogg LE. Effects of long-term nitrogen addition on microbial enzyme activity in eight forested and grassland sites: implications for litter and soil organic matter decomposition. Ecosystems, 2008, 12(1): 1-15.

[41]

Kourtev PS, Ehrenfeld JG, Huang WZ. Enzyme activities during litter decomposition of two exotic and two native plant species in hardwood forests of New Jersey. Soil Biol Biochem, 2002, 34: 1207-1218.

[42]

Krashevska V, Maraun M, Scheu S. How does litter quality affect the community of soil protists (testate amoebae) of tropical montane rainforests?. FEMS Microbiol Ecol, 2012, 80(3): 603-607.

[43]

Kunhamu TK, Kumar BM, Viswanath S. Does thinning affect litterfall, litter decomposition, and associated nutrient release in Acacia mangium stands of Kerala in peninsular India?. Can J For Res, 2009, 39(4): 792-801.

[44]

Li Q, Lee AH, Wollum AG. Microbial biomass and bacterial functional diversity in forest soils: effects of organic matter removal, compaction, and vegetation control. Soil Biol Biochem, 2004, 36: 571-579.

[45]

Liao JH, Wang HH, Tsai CC, Hseu ZY. Litter production, decomposition and nutrient return of uplifted coral reef tropical forest. For Ecol Manage, 2006, 235(1–3): 174-185.

[46]

Lv YN, Wang CY, Jia YY, Wang WW, Ma X, Du JJ, Pu GZ, Tian XJ. Effects of sulfuric, nitric, and mixed acid rain on litter decomposition, soil microbial biomass, and enzyme activities in subtropical forests of China. Appl Soil Ecol, 2014, 79: 1-9.

[47]

Matulich KL, Martiny JBH. Microbial composition alters the response of litter decomposition to environmental change. Ecology, 2014, 96(1): 154-163.

[48]

McClaugherty C, Berg B. Cellulose, lignin and nitrogen concentrations as rate regulating factors in late stages of forest litter decomposition. Pedobiologia, 1987, 30(2): 101-112.

[49]

Mosca E, Montecchio L, Scattolin L, Garbaye J. Enzymatic activities of three ectomycorrhizal types of Quercus robur L. in relation to tree decline and thinning. Soil Biol Biochem, 2007, 39(11): 2897-2904.

[50]

Mukhopadhyay S, Joy VC. Influence of leaf litter types on microbial functions and nutrient status of soil: ecological suitability of forest trees for afforestation in tropical laterite wastelands. Soil Biol Biochem, 2010, 42(12): 2306-2315.

[51]

Mungai NW, Motavalli PP, Kremer RJ, Nelson KA. Spatial variation of soil enzyme activities and microbial functional diversity in temperate alley cropping systems. Biol Fert Soils, 2005, 42(2): 129-136.

[52]

Rietl AJ, Jackson CR. Effects of the ecological restoration practices of prescribed burning and mechanical thinning on soil microbial enzyme activities and leaf litter decomposition. Soil Biol Biochem, 2012, 50: 47-57.

[53]

Riutta T, Slade EM, Bebber DP, Taylor ME, Malhi Y, Riordan P, Macdonald DW, Morecroft MD. Experimental evidence for the interacting effects of forest edge, moisture and soil macrofauna on leaf litter decomposition. Soil Biol Biochem, 2012, 49: 124-131.

[54]

Roig S, del Río M, Cañellas I, Montero G. Litter fall in Mediterranean Pinus pinaster Ait stands under different thinning regimes. For Ecol Manag, 2005, 206(1–3): 179-190.

[55]

Saiya-Cork KR, Sinsabaugh RL, Zak DR. The effects of long term nitrogen deposition on extracellular enzyme activity in an Acer saccharum forest soil. Soil Biol Biochem, 2002, 34(9): 1309-1315.

[56]

Schinner F, von Mersi W. Xylanase-, CM-cellulase- and invertase activity in soil: an improved method. Soil Biol Biochem, 1990, 22(4): 511-515.

[57]

Shi S, Richardson AE, Callaghan MO, DeAngelis KM, Jones EE, Stewart A, Firestone MK, Condron LM. Effects of selected root exudate components on soil bacterial communities. FEMS Microbiol Ecol, 2011, 77: 600-610.

[58]

Smolander A, Levula T, Kitunen V. Response of litter decomposition and soil C and N transformations in a Norway spruce thinning stand to removal of logging residue. For Ecol Manag, 2008, 256(5): 1080-1086.

[59]

Staddon WJ, Duchesne LC, Trevors JT. Microbial diversity and community structure of postdisturbance forest soils as determined by sole-carbon-source utilization patterns. Microb Ecol, 1997, 34: 125-130.

[60]

Torres PA, Abril AB, Bucher EH. Microbial succession in litter decomposition in the semi-arid Chaco woodland. Soil Biol Biochem, 2005, 37(1): 49-54.

[61]

Trinder CJ, Johnson D, Artz RRE. Litter type, but not plant cover, regulates initial litter decomposition and fungal community structure in a recolonising cutover peatland. Soil Biol Biochem, 2009, 41(3): 651-655.

[62]

Ushio M, Kitayama K, Balser TC. Tree species effects on soil enzyme activities through effects on soil physicochemical and microbial properties in a tropical montane forest on Mt. Kinabalu, Borneo. Pedobiologia, 2010, 53(4): 227-233.

[63]

Wang C, Guo P, Han G, Feng X, Zhang P, Tian X. Effect of simulated acid rain on the litter decomposition of Quercus acutissima and Pinus massoniana in forest soil microcosms and the relationship with soil enzyme activities. Sci Total Environ, 2010, 408(13): 2706-2713.

[64]

Wang QK, Wang SL, He TX, Liu L, Wu JB. Response of organic carbon mineralization and microbial community to leaf litter and nutrient additions in subtropical forest soils. Soil Biol Biochem, 2014, 71: 13-20.

[65]

Wardle DA. Communities and ecosystems: Linking the aboveground and belowground components, 2002, Princeton: Princeton University Press.

[66]

Wardle DA, Bardgett RD, Klironomos JN. Ecological linkages between aboveground and belowground biota. Science, 2004, 304: 1629-1633.

[67]

Wic Baena C, Andrés-Abellán M, Lucas-Borja ME, Martínez-García E, García-Morote FA, Rubio E, López-Serrano FR. Thinning and recovery effects on soil properties in two sites of a Mediterranean forest, in Cuenca Mountain (South-eastern of Spain). For Ecol Manag, 2013, 308: 223-230.

[68]

Wu WX, Ye QF, Min H, Duan XJ, Jin WM. Bt-transgenic rice straw affects the culturable microbiota and dehydrogenase and phosphatase activities in a flooded paddy soil. Soil Biol Biochem, 2004, 36(2): 289-295.

[69]

Yang YS, Guo J, Chen G, Xie J, Gao R, Li Z, Jin Z. Carbon and nitrogen pools in Chinese fir and evergreen broadleaved forests and changes associated with felling and burning in mid-subtropical China. For Ecol Manag, 2005, 216(1–3): 216-226.

[70]

Zak DR, Holmes WE, White D, Peacock A, Tilman D. Plant diversity, soil microbial communities, and ecosystem function: Are there any links?. Ecology, 2003, 84: 2042-2050.

[71]

Zhang P, Tian XJ, He XB, Song FQ, Ren LL, Jiang P. Effect of litter quality on its decomposition in broadleaf and coniferous forest. Eur J Soil Biol, 2008, 44(4): 392-399.

[72]

Zhang Y, Chen YHH, Reich BP. Forest productivity increases with evenness, species richness and trait variation: a global meta-analysis. J Ecol, 2012, 100: 742-749.

[73]

Zhang B, Wang HL, Yao SH, Bi LD. Litter quantity confers soil functional resilience through mediating soil biophysical habitat and microbial community structure on an eroded bare land restored with mono Pinus massoniana. Soil Biol Biochem, 2013, 57: 556-567.

[74]

Zhong WH, Cai ZC. Long-term effects of inorganic fertilizers on microbial biomass and community functional diversity in a paddy soil derived from quaternary red clay. Appl Soil Ecol, 2007, 36(2–3): 84-91.

AI Summary AI Mindmap
PDF

139

Accesses

0

Citation

Detail

Sections
Recommended

AI思维导图

/