Prioritization scheme for quantitative structure-permeability relationship models to predict dermal absorption of chemicals

Ashish C. Jachak , Benjamin Heckman , Frank Pagone

Journal of Environmental Exposure Assessment ›› 2025, Vol. 4 ›› Issue (4) : 42

PDF
Journal of Environmental Exposure Assessment ›› 2025, Vol. 4 ›› Issue (4) :42 DOI: 10.20517/jeea.2025.42
Research Article

Prioritization scheme for quantitative structure-permeability relationship models to predict dermal absorption of chemicals

Author information +
History +
PDF

Abstract

Permeability coefficient (kp) is routinely used to quantify the movement of chemicals across the skin. Log octanol-water partition coefficient (log Kow) and molecular weight (MW) are often incorporated into skin permeation models to generate the kp. Given that the same dataset is used to estimate skin permeation, novel approaches are required to achieve targeted and accurate results. The main goal of this study is to identify a prioritization scheme for quantitative structure-permeability relationships (QSPRs) when using two molecular descriptors, log Kow and MW. A second goal is to determine whether classification based on functional groups and structural similarities enhances the existing QSPR models. Ten QSPR models using log Kow and MW were reviewed to identify the predictive ability of kp using a comprehensive dataset. The dataset was filtered to identify molecules with structural and functional group similarities, and the resulting subset was subjected to the QSPRs used in the preceding analysis to demonstrate improvements in predictive performance. By comparing the kp predictions of the QSPRs to measured kp values, we were able to devise a systematic approach to improve the predictive ability of QSPRs. Using the proposed hierarchical approach, researchers can select an appropriate QSPR model to accurately predict the dermal kp of a given chemical compound. Such predictions can be a viable alternative to experimentation, which can be resource-intensive.

Keywords

Quantitative structure-activity relationship / skin permeability / molecular weight / octanol-water partition coefficient / permeability coefficient / dermal penetration

Cite this article

Download citation ▾
Ashish C. Jachak, Benjamin Heckman, Frank Pagone. Prioritization scheme for quantitative structure-permeability relationship models to predict dermal absorption of chemicals. Journal of Environmental Exposure Assessment, 2025, 4(4): 42 DOI:10.20517/jeea.2025.42

登录浏览全文

4963

注册一个新账户 忘记密码

References

[1]

Geinoz S,Testa B.Quantitative structure-permeation relationships (QSPeRs) to predict skin permeation: a critical evaluation.Pharm Res2004;21:83-92

[2]

Moss GP.Quantitative structure-permeability relationships for percutaneous absorption: re-analysis of steroid data.Int J Pharm2002;238:105-9

[3]

Cronin MT.Pitfalls in QSAR.J Mol Struct THEOCHEM2003;622:39-51

[4]

Flynn, G. L. Physicochemical determinants of skin absorption. In Principles of Route-to-Route Extrapolation for Risk Assessment; Gerrity, T. R., Henry, C. J., Eds.; Elsevier, 1990; pp 93-127. https://hero.epa.gov/reference/10627124/ (accessed 2025-11-11)

[5]

Wilschut A,Robinson PJ.Estimating skin permeation. The validation of five mathematical skin permeation models.Chemosphere1995;30:1275-96

[6]

Cronin MT,Moss GP.Investigation of the mechanism of flux across human skin in vitro by quantitative structure-permeability relationships.Eur J Pharm Sci1999;7:325-30

[7]

Abdallah RM,Hammad A.Predictive modeling of skin permeability for molecules: investigating FDA-approved drug permeability with various AI algorithms.PLOS Digit Health2024;3:e0000483 PMCID:PMC10990209

[8]

Kunita R,Todo H.Integrating mathematical approaches (IMAS): novel methodology for predicting dermal absorption rates of chemicals under finite dose conditions.J Toxicol Sci2024;49:219-30

[9]

Lee PH,Shanmugasundaram V.Development of an in silico model for human skin permeation based on a Franz cell skin permeability assay.Bioorg Med Chem Lett2010;20:69-73

[10]

Mitragotri S,Bunge AL.Mathematical models of skin permeability: an overview.Int J Pharm2011;418:115-29

[11]

Cheruvu HS,Grice JE.An updated database of human maximum skin fluxes and epidermal permeability coefficients for drugs, xenobiotics, and other solutes applied as aqueous solutions.Data Brief2022;42:108242 PMCID:PMC9118613

[12]

Magnusson BM,Cross SE.Molecular size as the main determinant of solute maximum flux across the skin.J Invest Dermatol2004;122:993-9

[13]

Guy RH.Structure-permeability relationships in percutaneous penetration.J Pharm Sci1992;81:603-4

[14]

Roberts MS,Mangion SE.Topical drug delivery: history, percutaneous absorption, and product development.Adv Drug Deliv Rev2021;177:113929

[15]

Juntunen J,Sloan KB.The effect of water solubility of solutes on their flux through human skin in vitro: a prodrug database integrated into the extended Flynn database.Int J Pharm2008;351:92-103

[16]

Thomas J,Wasdo S,Sloan KB.The effect of water solubility of solutes on their flux through human skin in vitro: an extended Flynn database fitted to the Roberts-Sloan equation.Int J Pharm2007;339:157-67

[17]

Majumdar S,Wasdo S.The effect of water solubility of solutes on their flux through human skin in vitro.Int J Pharm2007;329:25-36

[18]

Fujiwara S,Hashida M.QSAR analysis of interstudy variable skin permeability based on the “latent membrane permeability” concept.J Pharm Sci2003;92:1939-46

[19]

Moody RP.Determination of dermal absorption QSAR/QSPRs by brute force regression: multiparameter model development with Molsuite 2000.J Toxicol Environ Health A2003;66:1927-42

[20]

ten Berge W. A simple dermal absorption model: derivation and application.Chemosphere2009;75:1440-5

[21]

Cleek RL.A new method for estimating dermal absorption from chemical exposure. 1. General approach.Pharm Res1993;10:497-506

[22]

Mitragotri S.A theoretical analysis of permeation of small hydrophobic solutes across the stratum corneum based on Scaled Particle Theory.J Pharm Sci2002;91:744-52

[23]

Potts RO.Predicting skin permeability.Pharm Res1992;9:663-9

[24]

USEPAA. Risk Assessment Guidance for Superfund (RAGS): Part E. https://www.epa.gov/risk/risk-assessment-guidance-superfund-rags-part-e (accessed 2025-11-11).

[25]

Vecchia, B. E.; Bunge, A. L. Skin absorption databases and predictive equations. In Transdermal Drug Delivery; Guy, R. H., Hadgraft, J., Eds.; CRC Press, 2002; pp 57-141.

[26]

Schenk L,Fransson MN.Percutaneous absorption of thirty-eight organic solvents in vitro using pig skin.PLoS One2018;13:e0205458 PMCID:PMC6209206

[27]

Walker JD,Patlewicz G.Quantitative structure-activity relationships for predicting percutaneous absorption rates.Environ Toxicol Chem2003;22:1870-84

[28]

Değím T,Ilbasmiş S.Prediction of skin penetration using artificial neural network (ANN) modeling.J Pharm Sci2003;92:656-64

[29]

Chen L,Lian G.Recent advances in predicting skin permeability of hydrophilic solutes.Adv Drug Deliv Rev2013;65:295-305

[30]

Moss GP,Wilkinson SC.The application and limitations of mathematical modelling in the prediction of permeability across mammalian skin and polydimethylsiloxane membranes.J Pharm Pharmacol2011;63:1411-27

[31]

Zhang Q,Li P,Wang GJ.Skin solubility determines maximum transepidermal flux for similar size molecules.Pharm Res2009;26:1974-85

[32]

Magee PS. Some novel approaches to modelling transdermal penetration and reactivity with epidermal proteins. https://books.google.com/books?hl=zh-CN&lr=&id=gEgtL8EFQ9UC&oi=fnd&pg=PA137&dq=Some+novel+approaches+to+modelling+transdermal+penetration+and+reactivity+with+epidermal+proteins&ots=ehdrQSOi-Y&sig=rvGgQIPNk-E-cL_MH0RrcO_U2ag#v=onepage&q=Some%20novel%20approaches%20to%20modelling%20transdermal%20penetration%20and%20reactivity%20with%20epidermal%20proteins&f=false (accessed 2025-11-11).

[33]

Panel on Plant Protection Products and their Residues (PPR). Scientific opinion on the science behind the revision of the guidance document on dermal absorption.EFS2.2011;9:2294

AI Summary AI Mindmap
PDF

0

Accesses

0

Citation

Detail

Sections
Recommended

AI思维导图

/