Corynebacterium glutamicum for Microbial Production of Chitin Oligosaccharides Using Modular Engineering

Chen Deng , Ruijie Xin , Xingjian Li , Liqiang Fan , Yongjun Qiu , Liming Zhao

Food Bioengineering ›› 2025, Vol. 4 ›› Issue (2) : 127 -141.

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Food Bioengineering ›› 2025, Vol. 4 ›› Issue (2) : 127 -141. DOI: 10.1002/fbe2.70012
RESEARCH ARTICLE

Corynebacterium glutamicum for Microbial Production of Chitin Oligosaccharides Using Modular Engineering

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Abstract

Microbial fermentation is a potent strategy for eco-friendly and sustainable chitin oligosaccharide (CHOS) production. Nonetheless, hurdles (e.g., imbalanced metabolic flow and the need for uridine diphosphate (UDP)-sugar donor consumption in CHOS synthesis) hinder enhanced and efficient production. In this study, we aimed to use Corynebacterium glutamicum as the foundational organism for de novo CHOS synthesis. Initially, we developed the CHOS synthesis pathway in C. glutamicum, attaining a CHOS titer of 113.34 mg/L. Furthermore, we fortified the uridine 5′-diphospho-N-acetylglucosamine (UDP-GlcNAc) synthesis module, vital for CHOS and other functional sugar synthesis, and developed a system for regenerating uridine triphosphate (UTP) precursors. Finally, we performed C. glutamicum-mediated scale-up CHOS production in a 5-L bioreactor yielding a titer of 5.08 g/L. The CHOS chassis strain provides a robust foundation for mass CHOS production via metabolic engineering. Altering the intracellular UDP-sugar donor creation pathway could reportedly significantly enhance CHOS production. We attained the peak concentration of 829.33 mg/L with the heightened expression of glmM, glmU, and the metabolic equilibrium of PCM1 and AmgK. Bacterial growth remained unaffected by the excessive gene expressions or external gene incorporations. In addition, the swift growth and C. glutamicum accumulation in the fermenter led to increased CHOS production, reaching a titer of 5.08 g/L from the recombinant strain CGSL63, being 4.43 times higher than in the case of shake flask fermentation. The engineering strategies used in this study might be helpful for the C. glutamicum-mediated microbial synthesis of functional sugars. The methods applied in this study are broadly applicable for boosting the microbial generation of other valuable functional sugars.

Keywords

chitin oligosaccharides / Corynebacterium glutamicum / metabolic engineering / synthetic biology / UDP-sugar donor

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Chen Deng, Ruijie Xin, Xingjian Li, Liqiang Fan, Yongjun Qiu, Liming Zhao. Corynebacterium glutamicum for Microbial Production of Chitin Oligosaccharides Using Modular Engineering. Food Bioengineering, 2025, 4(2): 127-141 DOI:10.1002/fbe2.70012

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References

[1]

Aranaz, I., N. Acosta, C. Civera, et al. 2018. “Cosmetics and Cosmeceutical Applications of Chitin, Chitosan and Their Derivatives.” Polymers 10: 213.

[2]

Barny, M.-A., E. Schoonejans, A. Economou, A. W. B. Johnston, and J. A. Downie. 1996. “The C-Terminal Domain of the Rhizobium leguminosarum Chitin Synthase NodC Is Important for Function and Determines the Orientation of the N-Terminal Region in the Inner Membrane.” Molecular Microbiology 19: 443–453.

[3]

Deng, C., X. Lv, J. Li, et al. 2021. “Synergistic Improvement of N-Acetylglucosamine Production by Engineering Transcription Factors and Balancing Redox Cofactors.” Metabolic Engineering 67: 330–346.

[4]

Deng, C., X. Lv, Y. Liu, et al. 2019. “Metabolic Engineering of Corynebacterium glutamicum S9114 Based on Whole-Genome Sequencing for Efficient N-Acetylglucosamine Synthesis.” Synthetic and Systems Biotechnology 4: 120–129.

[5]

Deng, C., M. Zhao, Q. Zhao, and L. Zhao. 2023. “Advances in Green Bioproduction of Marine and Glycosaminoglycan Oligosaccharides.” Carbohydrate Polymers 300: 120254.

[6]

Gisin, J., A. Schneider, B. Nägele, M. Borisova, and C. Mayer. 2013. “A Cell Wall Recycling Shortcut That Bypasses Peptidoglycan De Novo Biosynthesis.” Nature Chemical Biology 9: 491–493.

[7]

Je, J.-Y., and S.-K. Kim. 2012. “Chitooligosaccharides as Potential Nutraceuticals: Production and Bioactivities.” Advances in Food and Nutrition Research 65: 321–336.

[8]

Jiang, Y., F. Qian, J. Yang, et al. 2017. “CRISPR-Cpf1 Assisted Genome Editing of Corynebacterium glutamicum.” Nature Communications 8: 15179.

[9]

Kamst, E., J. Bakkers, N. E. M. Quaedvlieg, et al. 1999. “Chitin Oligosaccharide Synthesis by Rhizobia and Zebrafish Embryos Starts by Glycosyl Transfer to O4 of the Reducing-Terminal Residue.” Biochemistry 38: 4045–4052.

[10]

Kamst, E., C. K. D. Breek, and H. P. Spaink. 2000. “Functional Analysis of Chimeras Derived From the Sinorhizobium meliloti and Mesorhizobium loti nodC Genes Identifies Regions Controlling Chitin Oligosaccharide Chain Length.” Molecular and General Genetics MGG 264, no. 1–2: 75–81.

[11]

Kamst, E., J. Pilling, L. M. Raamsdonk, B. J. Lugtenberg, and H. P. Spaink. 1997. “Rhizobium Nodulation Protein Nodc Is an Important Determinant of Chitin Oligosaccharide Chain Length in Nod Factor Biosynthesis.” Journal of Bacteriology 179: 2103–2108.

[12]

Kamst, E., K. Zegelaar-Jaarsveld, G. A. van der Marel, J. H. van Boom, B. J. J. Lugtenberg, and H. P. Spaink. 1999. “Chemical Synthesis of N-Acetylglucosamine Derivatives and Their Use as Glycosyl Accepters by the Mesorhizobium loti Chitin Oligosaccharide Synthase NodC.” Carbohydrate Research 321: 176–189.

[13]

Kapatral, V., X. Bina, and A. M. Chakrabarty. 2000. “Succinyl Coenzyme A Synthetase of Pseudomonas aeruginosa With a Broad Specificity for Nucleoside Triphosphate (NTP) Synthesis Modulates Specificity for NTP Synthesis by the 12-Kilodalton Form of Nucleoside Diphosphate Kinase.” Journal of Bacteriology 182: 1333–1339.

[14]

Lerner, C. G., B. T. Stephenson, and R. L. Switzer. 1987. “Structure of the Bacillus-subtilis Pyrimidine Biosynthetic Pyr Gene Cluster.” Journal of Bacteriology 169: 2202–2206.

[15]

Li, Y., Y. Zhou, Y. Ma, and X. Li. 2011. “Design and Synthesis of Novel Cell Wall Inhibitors of Mycobacterium tuberculosis GlmM and GlmU.” Carbohydrate Research 346: 1714–1720.

[16]

Li, Z., Q. Wang, H. Liu, et al. 2023. “Engineering Corynebacterium Glutamicum for the Efficient Production of N-Acetylglucosamine.” Bioresource Technology 390: 129865.

[17]

Li, Z., J. Zhang, and H. Ai. 2021. “Genetically Encoded Green Fluorescent Biosensors for Monitoring UDP-GlcNAc in Live Cells.” ACS Central Science 7: 1763–1770.

[18]

Lindsay, D., V. S. Brözel, and A. von Holy. 2006. “Biofilm-Spore Response in Bacillus cereus and Bacillus subtilis During Nutrient Limitation.” Journal of Food Protection 69: 1168–1172.

[19]

Ling, M., Y. Wu, R. Tian, et al. 2022. “Combinatorial Pathway Engineering of Bacillus subtilis for Production of Structurally Defined and Homogeneous Chitooligosaccharides.” Metabolic Engineering 70: 55–66.

[20]

Liu, L., Y. Liu, H. Shin, et al. 2013. “Microbial Production of Glucosamine and N-Acetylglucosamine: Advances and Perspectives.” Applied Microbiology and Biotechnology 97: 6149–6158.

[21]

Liu, S., S. Shao, L. Li, et al. 2015. “Substrate-Binding Specificity of Chitinase and Chitosanase as Revealed by Active-Site Architecture Analysis.” Carbohydrate Research 418: 50–56.

[22]

Liu, Y., Z. Qin, C. Wang, and Z. Jiang. 2023. “N-Acetyl-d-Glucosamine-Based Oligosaccharides From Chitin: Enzymatic Production, Characterization and Biological Activities.” Carbohydrate Polymers 315: 121019.

[23]

Lodhi, G., Y. S. Kim, J. W. Hwang, et al. 2014. “Chitooligosaccharide and Its Derivatives: Preparation and Biological Applications.” Biomed Research International 2014 2014: 654913.

[24]

Milewski, S., I. Gabriel, and J. Olchowy. 2006. “Enzymes of UDP-GlcNAc Biosynthesis in Yeast.” Yeast 23: 1–14.

[25]

Ngo, D. H., T. S. Vo, D. N. Ngo, et al. 2015. “Biological Effects of Chitosan and Its Derivatives.” Food Hydrocolloids 51: 200–216.

[26]

Okuyama, K., T. Hamamoto, K. Ishige, K. Takenouchi, and T. Noguchi. 2000. “An Efficient Method for Production of Uridine 5′-Diphospho-N-Acetylglucosamine.” Bioscience, Biotechnology, and Biochemistry 64: 386–392.

[27]

Qu, T., C. Zhang, Z. Qin, L. Fan, L. Jiang, and L. Zhao. 2021. “A Novel GH Family 20 β-N-Acetylhexosaminidase With Both Chitosanase and Chitinase Activity From Aspergillus oryzae.” Frontiers in Molecular Biosciences 8: 684086.

[28]

Rahman, M. A., K. Kuroda, H. Endo, et al. 2022. “Synthesis of Protected Precursors of Chitin Oligosaccharides by Electrochemical Polyglycosylation of Thioglycosides.” Beilstein Journal of Organic Chemistry 18: 1133–1139.

[29]

Samain, E., S. Drouillard, A. Heyraud, H. Driguez, and R. A. Geremia. 1997. “Gram-Scale Synthesis of Recombinant Chitooligosaccharides in Escherichia coli.” Carbohydrate Research 302: 35–42.

[30]

Sun, X., Z. Peng, C. Li, et al. 2023. “Combinatorial Metabolic Engineering and Tolerance Evolving of Escherichia coli for High Production of 2′-Fucosyllactose.” Bioresource Technology 372: 128667.

[31]

Wang, K., X. Wang, H. Luo, et al. 2022. “Synergetic Fermentation of Glucose and Glycerol for High-Yield N-Acetylglucosamine Production in Escherichia coli.” International Journal of Molecular Sciences 23: 773.

[32]

Wang, Y., L. Hu, H. Huang, et al. 2020. “Eliminating the Capsule-Like Layer to Promote Glucose Uptake for Hyaluronan Production by Engineered Corynebacterium glutamicum.” Nature Communications 11: 3120.

[33]

Xia, W., P. Liu, J. Zhang, and J. Chen. 2011. “Biological Activities of Chitosan and Chitooligosaccharides.” Food Hydrocolloids 25: 170–179.

[34]

Xu, J., J. Zhang, M. Han, and W. Zhang. 2016. “A Method for Simultaneous Gene Overexpression and Inactivation in the Corynebacterium glutamicum Genome.” Journal of Industrial Microbiology & Biotechnology 43, no. 10: 1417–1427.

[35]

Yang, A., L. Yu, Z. Chen, et al. 2017. “Label-Free Quantitative Proteomic Analysis of Chitosan Oligosaccharide-Treated Rice Infected With Southern Rice Black-Streaked Dwarf Virus.” Viruses 9: 115.

[36]

Yang, J., and S. Yang. 2017. “Comparative Analysis of Corynebacterium glutamicum Genomes: A New Perspective for the Industrial Production of Amino Acids.” BMC Genomics 18: 940.

[37]

Yu, L., Y. Gao. Y. He, et al. 2024. “Developing the E. coli platform for Efficient Production of UMP-Derived Chemicals.” Metabolic Engineering 83: 61–74. https://doi.org/10.1016/i.ymben.2024.03.004.

[38]

Yuan, X., J. Zheng, S. Jiao, et al. 2019. “A Review on the Preparation of Chitosan Oligosaccharides and Application to Human Health, Animal Husbandry and Agricultural Production.” Carbohydrate Polymers 220: 60–70.

[39]

Zhang, B., G. Gao, X. H. Chu, and B. C. Ye. 2019. “Metabolic Engineering of Corynebacterium glutamicum S9114 to Enhance the Production of l-Ornithine Driven by Glucose and Xylose.” Bioresource Technology 284: 204–213.

[40]

Zhang, D., P. G. Wang, and Q. Qi. 2007. “A Two-Step Fermentation Process for Efficient Production of Penta-N-Acetyl-Chitopentaose in Recombinant Escherichia coli.” Biotechnology Letters 29: 1729–1733.

[41]

Zhang, J., F. Qian, F. Dong, et al. 2020. “De Novo Engineering of Corynebacterium glutamicum for l-Proline Production.” ACS Synthetic Biology 9: 1897–1906.

[42]

Zhang, M. K. Zhang, T. Liu, et al. 2023. “High-Level Production of Lacto-N-Neotetraose in Escherichia coli by Stepwise Optimization of the Biosynthetic Pathway.” Journal of Agricultural and Food Chemistry 71, no. 43: 16212–16220. https://doi.org/10.1021/acs.jafc.3c04856.

[43]

Zhang, J., J. Zhao, Q. Fu, et al. 2024. “Metabolic Engineering of Paenibacillus polymyxa for Effective Production of 2,3-Butanediol From Poplar Hydrolysate.” Bioresource Technology 392: 130002.

[44]

Zhao, Q., L. Fan, C. Deng, C. Ma, C. Zhang, and L. Zhao. 2023. “Bioconversion of Chitin Into Chitin Oligosaccharides Using a Novel Chitinase With High Chitin-Binding Capacity.” International Journal of Biological Macromolecules 244: 125241.

[45]

Zhu, H., S. M. Yang, Z. M. Yuan, and R. Ban. 2015. “Metabolic and Genetic Factors Affecting the Productivity of Pyrimidine Nucleoside in Bacillus subtilis.” Microbial Cell Factories 14: 54.

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2025 The Author(s). Food Bioengineering published by John Wiley & Sons Australia, Ltd on behalf of State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology.

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