Sulfolobales: Acidothermophilic archaea as models for biology and biotechnological applications

Pengju Wu , Qi Gan , Haodun Li , Shikuan Liang , Yunfeng Yang , Shuai Li , Yan Xie , Qihong Huang , Xu Feng , Guanhua Yuan , Jinfeng Ni , Yulong Shen

Engineering Microbiology ›› 2026, Vol. 6 ›› Issue (2) : 100262

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Engineering Microbiology ›› 2026, Vol. 6 ›› Issue (2) :100262 DOI: 10.1016/j.engmic.2026.100262
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Sulfolobales: Acidothermophilic archaea as models for biology and biotechnological applications
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Abstract

Archaea of the order Sulfolobales are the earliest extremophiles discovered. They inhabit acidic terrestrial hot springs worldwide. Since their discovery, these microbes have attracted the attention of scientists studying molecular biology and microbial resources. Their evolutionary closeness to Asgard archaea and eukaryotes, the availability of genetic toolboxes for several species, and unique metabolic pathways make them ideal microbes for studying the biology of archaea and the origin of eukaryotic features, as well as platforms for synthetic biology and potential industrial applications, such as biomass degradation and bioleaching. This review summarizes recent advances in the study of Sulfolobales biology and discusses their biotechnological applications with a specific focus on biomass degradation using obligate heterotrophic Sulfolobales species.

Keywords

Archaea / Sulfolobales / Acidothermophile / Archaea biology / Biomass degradation and transformation

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Pengju Wu, Qi Gan, Haodun Li, Shikuan Liang, Yunfeng Yang, Shuai Li, Yan Xie, Qihong Huang, Xu Feng, Guanhua Yuan, Jinfeng Ni, Yulong Shen. Sulfolobales: Acidothermophilic archaea as models for biology and biotechnological applications. Engineering Microbiology, 2026, 6 (2) : 100262 DOI:10.1016/j.engmic.2026.100262

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Declaration of competing interest

The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

CRediT authorship contribution statement

Pengju Wu: Writing – review & editing, Writing – original draft, Investigation. Qi Gan: Writing – review & editing, Writing – original draft, Investigation. Haodun Li: Writing – review & editing, Writing – original draft, Investigation. Shikuan Liang: Writing – review & editing, Writing – original draft, Investigation. Yunfeng Yang: Writing – review & editing, Writing – original draft, Investigation. Shuai Li: Investigation. Yan Xie: Investigation. Qihong Huang: Writing – review & editing, Writing – original draft. Xu Feng: Writing – review & editing. Guanhua Yuan: Writing – review & editing. Jinfeng Ni: Writing – review & editing, Writing – original draft, Funding acquisition. Yulong Shen: Writing – review & editing, Writing – original draft, Supervision, Funding acquisition, Conceptualization.

References

[1]

A.M. Lewis, A. Recalde, C. Brasen, J.A. Counts, P. Nussbaum, J. Bost, L. Schocke, L. Shen, D.J. Willard, T.E.F. Quax, E. Peeters, B. Siebers, S.V. Albers, R.M. Kelly, The biology of thermoacidophilic archaea from the order Sulfolobales, FEMS Microbiol. Rev. 45 (2021).

[2]

M.J.H. Manesh, D.J. Willard, A.M. Lewis, R.M. Kelly, Extremely thermoacidophilic archaea for metal bioleaching: what do their genomes tell us? Bioresour. Technol. 391 (2024) 129988.

[3]

M.W. Keller, G.L. Lipscomb, D.M. Nguyen, A.T. Crowley, G.J. Schut, I. Scott, R.M. Kelly, M.W.W. Adams, Ethanol production by the hyperthermophilic archaeon by expression of bacterial bifunctional alcohol dehydrogenases, Microb. Biotechnol. 10 (2017) 1535-1545.

[4]

L. Schocke, C. Brasen, B. Siebers, Thermoacidophilic sulfolobus species as source for extremozymes and as novel archaeal platform organisms, Curr. Opin. Biotechnol. 59 (2019) 71-77.

[5]

A. Cezanne, S. Foo, Y.W. Kuo, B. Baum, The archaeal cell cycle, Annu. Rev. Cell Dev. Bi. 40 (2024) 1-23.

[6]

T.D. Brock, K.M. Brock, R.T. Belly, R.L. Weiss, Sulfolobus: a new genus of sulfur—oxidizing bacteria living at low pH and high temperature, Arch. Mikrobiol. 84 (1972) 54-68.

[7]

S.K.W. Zillig, S. Wunderl, W. Schulz, H. Priess, I. Scholz, The sulfolobus “caldariella” group: taxonomy on the basis of the structure of DNA—dependent RNA polymerases, Arch. Microbiol. 125 (1980) 259-269.

[8]

W. Zillig, S. Yeats, I. Holz, A. Bock, F. Gropp, M. Rettenberger, S. Lutz, Plasmid—related anaerobic autotrophy of the novel archaebacterium sulfolobus ambivalens, Nature 313 (1985) 789-791.

[9]

K.J.K.N.A. Segerer, K.O. Stetter, Acidianus infernus gen. nov., sp. nov., and Acidianus brierleyi comb. nov.: facultatively aerobic, extremely acidophilic thermophilic sulfur—metabolizing archaebacteria, Int. J. Syst. Microbiol. 57 (1986) 1418-1423.

[10]

G. Huber, C. Spinnler, A. Gambacorta, K.O. Stetter, Metallosphaera sedula gen. And sp. nov. Represents a new genus of aerobic, metal—mobilizing, thermoacidophilic archaebacteria, Syst. Appl. Microbiol. 12 (1989) 38-47.

[11]

D. Grogan, P. Palm, W. Zillig, Isolate B12, which harbours a virus—like element, represents a new species of the archaebacterial genus Sulfolobus, Sulfolobus shibatae, sp, Arch. Microbiol. 154 (1990) 594-599.

[12]

Y.H. Itoh, N. Kurosawa, I. Uda, A. Sugai, S. Tanoue, T. Itoh, T. Horiuchi, T. Itoh, Metallosphaera sedula TA—2, a calditoglycerocaldarchaeol deletion strain of a thermoacidophilic archaeon, Extremophiles. 5 (2001) 241-245.

[13]

S. Takayanagi, H. Kawasaki, K. Sugimori, T. Yamada, A. Sugai, T. Ito, K. Yamasato, M. Shioda, Sulfolobus hakonensis sp. nov., a novel species of acidothermophilic archaeon, Int. J. Syst. Bacteriol. 46 (1996) 377-382.

[14]

N. Kurosawa, Y.H. Itoh, T. Iwai, A. Sugai, I. Uda, N. Kimura, T. Horiuchi, T. Itoh, Sulfurisphaera ohwakuensis gen. nov., sp. nov., a novel extremely thermophilic acidophile of the order Sulfolobales, Int. J. Syst. Bacteriol. (1998) 451-456 48 Pt 2.

[15]

T. Suzuki, T. Iwasaki, T. Uzawa, K. Hara, N. Nemoto, T. Kon, T. Ueki, A. Yamagishi, T. Oshima, Sulfolobus tokodaii sp. nov. (f. Sulfolobus sp. strain 7), a new member of the genus Sulfolobus isolated from Beppu Hot Springs, Japan, Extremophiles 6 (2002) 39-44.

[16]

X. Xiang, X. Dong, L. Huang, Sulfolobus tengchongensis sp. nov., a novel thermoacidophilic archaeon isolated from a hot spring in Tengchong, China, Extremophiles 7 (2003) 493-498.

[17]

L.J. Liu, X.Y. You, X. Guo, S.J. Liu, C.Y. Jiang, Metallosphaera cuprina sp. nov., an acidothermophilic, metal—mobilizing archaeon, Int. J. Syst. Evol. Microbiol. 61 (2011) 2395-2400.

[18]

M.S. Urbieta, N. Rascovan, C. Castro, S. Revale, M.A. Giaveno, M. Vazquez, E.R. Donati, Draft genome sequence of the novel thermoacidophilic archaeon acidianus copahuensis strain ALE1, isolated from the Copahue Volcanic Area in Neuquen, Argentina, Genome Announc. 2 (2014).

[19]

T.J. Peng, L.J. Liu, C. Liu, Z.F. Yang, S.J. Liu, C.Y. Jiang, Metallosphaera tengchongensis sp. nov., an acidothermophilic archaeon isolated from a hot spring, Int. J. Syst. Evol. Microbiol. 65 (2015) 537-542.

[20]

H.D. Sakai, N. Kurosawa, Saccharolobus caldissimus gen. nov., sp. nov., a facultatively anaerobic iron—reducing hyperthermophilic archaeon isolated from an acidic terrestrial hot spring, and reclassification of Sulfolobus solfataricus as Saccharolobus solfataricus comb. nov. And Sulfolobus shibatae as Saccharolobus shibatae comb, Int. J. Syst. Evol. Microbiol. 68 (2018) 1271-1278.

[21]

K. Tsuboi, H.D. Sakai, N. Nur, K.M. Stedman, N. Kurosawa, A. Suwanto, Sulfurisphaera javensis sp. nov., a hyperthermophilic and acidophilic archaeon isolated from Indonesian hot spring, and reclassification of Sulfolobus tokodaii Suzuki et al. 2002 as Sulfurisphaera tokodaii comb, Int. J. Syst. Evol. Microbiol. 68 (2018) 1907-1913.

[22]

H.D. Sakai, K. Nakamura, N. Kurosawa, Stygiolobus caldivivus sp. nov., a facultatively anaerobic hyperthermophilic archaeon isolated from the Unzen hot spring in Japan, Int. J. Syst. Evol. Microbiol. 72 (2022).

[23]

J.A. Counts, D.J. Willard, R.M. Kelly, Life in hot acid: a genome—based reassessment of the archaeal order Sulfolobales, Environ. Microbiol. 23 (2021) 3568-3584.

[24]

E.V. Koonin, A.R. Mushegian, M.Y. Galperin, D.R. Walker, Comparison of archaeal and bacterial genomes: computer analysis of protein sequences predicts novel functions and suggests a chimeric origin for the archaea, Mol. Microbiol. 25 (1997) 619-637.

[25]

A.C. Lindas, E.A. Karlsson, M.T. Lindgren, T.J. Ettema, R. Bernander, A unique cell division machinery in the Archaea, Proc. Natl. Acad. Sci. U.S.A. 105 (2008) 18942-18946.

[26]

M. Lundgren, L. Malandrin, S. Eriksson, H. Huber, R. Bernander, Cell cycle characteristics of crenarchaeota: unity among diversity, J. Bacteriol. 190 (2008) 5362-5367.

[27]

J. Zhang, X. Feng, M. Li, Y. Liu, M. Liu, L.J. Hou, H.P. Dong, Deep origin of eukaryotes outside Heimdallarchaeia within Asgardarchaeota, Nature 642 (2025) 990-998.

[28]

Y. Liu, K.S. Makarova, W.C. Huang, Y.I. Wolf, A.N. Nikolskaya, X. Zhang, M. Cai, C.J. Zhang, W. Xu, Z. Luo, L. Cheng, E.V. Koonin, M. Li, Expanded diversity of Asgard archaea and their relationships with eukaryotes, Nature 593 (2021) 553-557.

[29]

N. Zhang, L. Guo, L. Huang, The Sac10b homolog from Sulfolobus islandicus is an RNA chaperone, Nucleic. Acids. Res. 48 (2020) 9273-9284.

[30]

Z. Zhang, Z. Zhan, B. Wang, Y. Chen, X. Chen, C. Wan, Y. Fu, L. Huang, Archaeal chromatin proteins Cren7 and Sul7d compact DNA by bending and bridging, mBio 11 (2020).

[31]

Z. Zhang, M. Zhao, Y. Chen, L. Wang, Q. Liu, Y. Dong, Y. Gong, L. Huang, Architectural roles of Cren7 in folding crenarchaeal chromatin filament, Mol. Microbiol. 111 (2019) 556-569.

[32]

F. Blombach, F. Werner, Chromatin and gene regulation in archaea, Mol. Microbiol. 123 (2025) 218-231.

[33]

F. Blombach, M. Sykora, J. Case, X. Feng, D.P. Baquero, T. Fouqueau, D.K. Phung, D. Barker, M. Krupovic, Q. She, F. Werner, Cbp1 and Cren7 form chromatin—like structures that ensure efficient transcription of long CRISPR arrays, Nat. Commun. 15 (2024) 1620.

[34]

S.D. Bell, C.H. Botting, B.N. Wardleworth, S.P. Jackson, M.F. White, The interaction of Alba, a conserved archaeal, chromatin protein, with Sir2 and its regulation by acetylation, Science 296 (2002) 148-151.

[35]

V. De Kock, E. Peeters, R. Baes, The Lrs14 family of DNA—binding proteins as nucleoid—associated proteins in the Crenarchaeal order Sulfolobales, Mol. Microbiol. 123 (2025) 132-142.

[36]

R. Baes, F. Grunberger, S. Pyr Dit Ruys, M. Couturier, S. De Keulenaer, S. Skevin, F. Van Nieuwerburgh, D. Vertommen, D. Grohmann, S. Ferreira—Cerca, E. Peeters, Transcriptional and translational dynamics underlying heat shock response in the thermophilic crenarchaeon Sulfolobus acidocaldarius, mBio 14 (2023) e0359322.

[37]

M.U.D. Ahmad, I. Waege, W. Hausner, M. Thomm, W. Boos, K. Diederichs, W. Welte, Structural insights into nonspecific binding of DNA by TrmBL2, an archaeal chromatin protein, J. Mol. Biol. 427 (2015) 3216-3229.

[38]

L. Lemmens, K. Wang, E. Ruykens, V.T. Nguyen, A.C. Lindas, R. Willaert, M. Couturier, E. Peeters, DNA—binding properties of a novel crenarchaeal chromatin—organizing protein in sulfolobus acidocaldarius, Biomolecules. 12 (2022).

[39]

M. Abella, S. Rodriguez, S. Paytubi, S. Campoy, M.F. White, J. Barbe, The Sulfolobus solfataricus radA paralogue sso0777 is DNA damage inducible and positively regulated by the Sta1 protein, Nucleic. Acids. Res. 35 (2007) 6788-6797.

[40]

A. Kessler, G. Sezonov, J.I. Guijarro, N. Desnoues, T. Rose, M. Delepierre, S.D. Bell, D. Prangishvili, A novel archaeal regulatory protein, Sta1, activates transcription from viral promoters, Nucleic. Acids. Res. 34 (2006) 4837-4845.

[41]

A. Orell, E. Peeters, V. Vassen, S. Jachlewski, S. Schalles, B. Siebers, S.—V. Albers, Lrs14 transcriptional regulators influence biofilm formation and cell motility of crenarchaea, ISME J. 7 (2013) 1886-1898.

[42]

Q. Gan, H. Li, Q. Huang, Y. Yang, F. Sun, X. Feng, J. Ni, Z. Zhang, Q. She, Y. Shen, An Lrs14 family protein functions as a nucleoid—associated protein regulating cell cycle progression in Sulfolobales, Commun. Biol. (2025).

[43]

N. Takemata, S.D. Bell, Multi—scale architecture of archaeal chromosomes, Mol. Cell 81 (2021) 473-+.

[44]

N. Takemata, R.Y. Samson, S.D. Bell, Physical and functional compartmentalization of archaeal chromosomes, Cell 179 (2019) 165-179 e118.

[45]

C. Badel, R.Y. Samson, S.D. Bell, Chromosome organization affects genome evolution in sulfolobus archaea, Nat. Microbiol. 7 (2022) 820-830.

[46]

M. Lundgren, A. Andersson, L.M. Chen, P. Nilsson, R. Bernander, Three replication origins in species:: synchronous initiation of chromosome replication and asynchronous termination, P Natl Acad Sci USA 101 (2004) 7046-7051.

[47]

I.G. Duggin, S.A. McCallum, S.D. Bell, Chromosome replication dynamics in the archaeon, P Natl Acad Sci USA 105 (2008) 16737-16742.

[48]

R.Y. Samson, Y. Xu, C. Gadelha, T.A. Stone, J.N. Faqiri, D. Li, N. Qin, F. Pu, Y.X. Liang, Q. She, S.D. Bell, Specificity and function of archaeal DNA replication initiator proteins, Cell Rep. 3 (2013) 485-496.

[49]

R.Y. Samson, P.D. Abeyrathne, S.D. Bell, Mechanism of archaeal MCM helicase recruitment to DNA replication origins, Mol. Cell 61 (2016) 287-296.

[50]

K.S. Makarova, C. Zhang, Y.I. Wolf, S. Karamycheva, R.J. Whitaker, E.V. Koonin, Computational analysis of genes with lethal knockout phenotype and prediction of essential genes in archaea, mBio 15 (2024) e0309223.

[51]

K.S. Makarova, E.V. Koonin, Z. Kelman, The CMG (CDC45/RecJ, MCM, GINS) complex is a conserved component of the DNA replication system in all archaea and eukaryotes, Biol. Direct. 7 (2012) 7.

[52]

R. Dhanaraju, R.Y. Samson, X. Feng, A. Costa, G. Gonzalez—Gutierrez, S.D. Bell, An archaeal nucleoid—associated protein binds an essential motif in DNA replication origins, Nat. Commun. 16 (2025) 5230.

[53]

Y. Xiao, Z. Jiang, M. Zhang, X. Zhang, Q. Gan, Y. Yang, P. Wu, X. Feng, J. Ni, X. Dong, Q. She, Q. Huang, Y. Shen, The canonical single—stranded DNA—binding protein is not an essential replication factor but an RNA chaperon in Saccharolobus islandicus, iScience 26 (2023) 108389.

[54]

A. Quaiser, F. Constantinesco, M.F. White, P. Forterre, C. Elie, The Mre11 protein interacts with both Rad50 and the HerA bipolar helicase and is recruited to DNA following gamma irradiation in the archaeon sulfolobus acidocaldarius, BMC. Mol. Biol. 9 (2008) 25.

[55]

C. Rouillon, M.F. White, The XBP—Bax1 helicase—nuclease complex unwinds and cleaves DNA: implications for eukaryal and archaeal nucleotide excision repair, J. Biol. Chem. 285 (2010) 11013-11022.

[56]

M.F. White, Archaeal DNA repair: paradigms and puzzles, Biochem. Soc. Trans. 31 (2003) 690-693.

[57]

D. Constantinescu—Aruxandei, B. Petrovic—Stojanovska, J.C. Penedo, M.F. White, J.H. Naismith, Mechanism of DNA loading by the DNA repair helicase XPD, Nucleic. Acids. Res. 44 (2016) 2806-2815.

[58]

A.P. Wettasinghe, M.O. Seifi, M. Bravo, A.C. Adams, A. Patel, M. Lou, D. Kahanda, H.C. Peng, A.L. Stelling, L. Fan, J.D. Slinker, Molecular wrench activity of DNA helicases: keys to modulation of rapid kinetics in DNA repair, Protein Sci. 32 (2023) e4815.

[59]

L. Zhang, T. Gao, Z. Li, C. Chen, D. Jiang, Y. Yin, Y. Zheng, P. Cao, Y. Gong, Z. Yang, Alkylated DNA repair by a novel HhH—GPD family protein from Crenarchaea, Nucleic. Acids. Res. 53 (2025).

[60]

Q. Huang, Y. Li, C. Zeng, T. Song, Z. Yan, J. Ni, Q. She, Y. Shen, Genetic analysis of the Holliday junction resolvases Hje and Hjc in Sulfolobus islandicus, Extremophiles. 19 (2015) 505-514.

[61]

M. Sun, X. Feng, Z. Liu, W. Han, Y.X. Liang, Q. She, An Orc1/Cdc6 ortholog functions as a key regulator in the DNA damage response in Archaea, Nucleic. Acids. Res. 46 (2018) 6697-6711.

[62]

D. Xiong, Z. Li, W. Qi, S. Wang, J. Huang, N. Zhang, Z. Zhang, L. Huang, Archaeal replicative primase mediates DNA double—strand break repair, Nucleic. Acids. Res. 53 (2025).

[63]

H. Ling, F. Boudsocq, R. Woodgate, W. Yang, Crystal structure of a Y—family DNA polymerase in action: a mechanism for error—prone and lesion—bypass replication, Cell 107 (2001) 91-102.

[64]

X. Feng, B. Zhang, Z. Gao, R. Xu, X. Liu, S. Ishino, M. Feng, Y. Shen, Y. Ishino, Q. She, A well—conserved archaeal B—Family polymerase functions as an extender in translesion synthesis, mBio 13 (2022) e0265921.

[65]

X. Feng, X. Liu, R. Xu, R. Zhao, W. Feng, J. Liao, W. Han, Q. She, A unique B—Family DNA polymerase facilitating error—prone DNA damage tolerance in crenarchaeota, Front. Microbiol. 11 (2020) 1585.

[66]

K. Timinskas, A. Timinskas, C. Venclovas, Common themes in architecture and interactions of prokaryotic PolB2 and pol V mutasomes inferred from in silico studies, Comput. Struct. Biotechnol. J. 27 (2025) 401-410.

[67]

A.K. Kalliomaa—Sanford, F.A. Rodriguez—Castaneda, B.N. McLeod, V. Latorre—Rosello, J.H. Smith, J. Reimann, S.V. Albers, D. Barilla, Chromosome segregation in Archaea mediated by a hybrid DNA partition machine, Proc. Natl. Acad. Sci. u S. a 109 (2012) 3754-3759.

[68]

A.F. Kabli, I.W. Ng, N. Read, P. Pal, J. Reimann, N.T. Tran, S.V. Albers, T.B.K. Le, D. Barilla, Coupling chromosome organization to genome segregation in Archaea, Nat. Commun. 16 (2025) 6759.

[69]

A. Charles—Orszag, S.J. Lord, N. Herrera, L. Strauskulage, A. Bhowmick, T. Goddard, B. Wassmer, M. van Wolferen, G. Asper, A. Flis, J. Rodriguez, S. Redding, O. Rosenberg, S.—V. Albers, R.D. Mullins, Archaeal SegAB forms a bipolar structure that promotes chromosome segregation in spherical cells, (2025) 2025.2004.2015.649018.

[70]

J. Parham, V. Sorichetti, A. Cezanne, S. Foo, Y.W. Kuo, B. Hoogenberg, A. Radoux—Mergault, E. Mawdesley, L.D. Gatward, J. Boulanger, U. Schulze, A. Saric, B. Baum, Temporal and spatial coordination of DNA segregation and cell division in an archaeon, Proc. Natl. Acad. Sci. u S. a 122 (2025) e2513939122.

[71]

A.C. Lindas, R. Bernander, The cell cycle of archaea, Nat. Rev. Microbiol. 11 (2013) 627-638.

[72]

A.B. Jover, C. Dekker, The archaeal cdv cell division system, Trends. Microbiol. 31 (2023) 601-615.

[73]

S. Ithurbide, S. Gribaldo, S.V. Albers, N. Pende, Spotlight on FtsZ—based cell division in Archaea, Trends. Microbiol. 30 (2022) 665-678.

[74]

G.T. Risa, F. Hurtig, S. Bray, A.E. Hafner, L. Harker—Kirschneck, P. Faull, C. Davis, D. Papatziamou, D.R. Mutavchiev, C. Fan, L. Meneguello, A.A. Pulschen, G. Dey, S. Culley, M. Kilkenny, D.P. Souza, L. Pellegrini, R.A.M. de Bruin, R. Henriques, A.P. Snijders, A. Saric, A.C. Lindås, N.P. Robinson, B. Baum, The proteasome controls ESCRT—III—mediated cell division in an archaeon, Science 369 (2020) 642-+.

[75]

J.F. Liu, M. Lelek, Y.F. Yang, A. Salles, C. Zimmer, Y.L. Shen, M. Krupovic, A relay race of ESCRT—III paralogs drives cell division in a hyperthermophilic archaeon, mBio 16 (2025).

[76]

J.F. Liu, R.X. Gao, C.T. Li, J.F. Ni, Z.J. Yang, Q. Zhang, H.N. Chen, Y.L. Shen, Functional assignment of multiple ESCRT—III homologs in cell division and budding in Sulfolobus islandicus , Mol. Microbiol. 105 (2017) 540-553.

[77]

Y.—W. Kuo, J. Traparić, S. Foo, B. Baum, The mechanism of cell—cycle—dependent proteasomal degradation of archaeal ESCRT—III homolog CdvB in Sulfolobus, EMBO J. (2026).

[78]

S. Foo, I. Caspy, A. Cezanne, T.A.M. Bharat, B. Baum, A self—assembling surface layer flattens the cytokinetic furrow to aid cell division in an archaeon, Proc. Natl. Acad. Sci. u S. a 122 (2025) e2501044122.

[79]

A.C. Lindås, R. Bernander, The cell cycle of archaea, Nat. Rev. Microbiol. 11 (2013) 627-638.

[80]

Y. Wu, Q. Gan, K. Ning, R. Zhang, S. Liang, Y. Yang, P. Wu, X. Feng, Q. She, J. Ni, Y. Shen, Q. Huang, Phosphorylation of the 𝛼 subunit inhibits proteasome assembly and regulates cell division in an archaeon, bioRxiv. (2025) 2025.2005.2009.653063.

[81]

A. Angelov, W. Liebl, Erratum to: heterologous gene expression in the HyperthermophilicArchaeon Sulfolobus solfataricus, in: W.R. Streit, R. Daniel (Eds.), Metagenomics: Methods and Protocols, Humana Press, Totowa, NJ, 2010 E1— E1.

[82]

A. Litsios, B.T. Grys, O.Z. Kraus, H. Friesen, C. Ross, M.P.D. Masinas, D.T. Forster, M.T. Couvillion, S. Timmermann, M. Billmann, C. Myers, N. Johnsson, L.S. Churchman, C. Boone, B.J. Andrews, Proteome—scale movements and compartment connectivity during the eukaryotic cell cycle, Cell 187 (2024).

[83]

X.Y. Li, C. Lozano—Madueno, L. Martinez—Alvarez, X. Peng, A clade of RHH proteins ubiquitous in Sulfolobales and their viruses regulates cell cycle progression (vol 51, pg 1724, 2023), Nucleic. Acids. Res. 51 (2023) 4100— 4100.

[84]

Y.F. Yang, J.F. Liu, X.F. Fu, F. Zhou, S. Zhang, X.M. Zhang, Q.H. Huang, M. Krupovic, Q.X. She, J.F. Ni, Y.L. Shen, A novel RHH family transcription factor aCcr1 and its viral homologs dictate cell cycle progression in archaea, Nucleic Acids Res. 51 (2023) 1707-1723.

[85]

Y. Yang, Liang, S., Geng, Z., Gomez—Raya—Vilanova, M. V., Xia, W., Liu, J., Huang, Q., Ni, J., She, Q., Krupovic, M., Shen, Y., Three transcription factors coordinate the archaeal cell cycle progression through a regulatory braking point mechanism, bioRxiv doi: https://doi.org/10.1101/2025.10.16.681758 (2025).

[86]

M.V. Gomez—Raya—Vilanova, J. Teulière, S. Medvedeva, Y.P. Dai, E. Corel, P. Lopez, F.J. Lapointe, D. Bhattacharya, L.P. Haraoui, E. Turc, M. Monot, V. Cvirkaite—Krupovic, E. Bapteste, M. Krupovic, Transcriptional landscape of the cell cycle in a model thermoacidophilic archaeon reveals similarities to eukaryotes, Nat. Commun. 16 (2025).

[87]

Y. Yang, S. Liang, J. Liu, X. Fu, P. Wu, H. Li, J. Ni, Q. She, M. Krupovic, Y. Shen, Cran1, member of a new class of OLD family ATPases, functions in cell cycle progression in an archaeon, EMBo Rep. (2025).

[88]

S. Frols, M. Ajon, M. Wagner, D. Teichmann, B. Zolghadr, M. Folea, E.J. Boekema, A.J. Driessen, C. Schleper, S.V. Albers, UV—inducible cellular aggregation of the hyperthermophilic archaeon Sulfolobus solfataricus is mediated by pili formation, Mol. Microbiol. 70 (2008) 938-952.

[89]

B. Zolghadr, A. Klingl, A. Koerdt, A.J. Driessen, R. Rachel, S.V. Albers, Appendage—mediated surface adherence of Sulfolobus solfataricus, J. Bacteriol. 192 (2010) 104-110.

[90]

K. Lassak, T. Neiner, A. Ghosh, A. Klingl, R. Wirth, S.V. Albers, Molecular analysis of the crenarchaeal flagellum, Mol. Microbiol. 83 (2012) 110-124.

[91]

M. van Wolferen, A. Wagner, C. van der Does, S.V. Albers, The archaeal ced system imports DNA, Proc. Natl. Acad. Sci. u S. a 113 (2016) 2496-2501.

[92]

M.C. Gaines, M.N. Isupov, S. Sivabalasarma, R.U. Haque, M. McLaren, C.L. Mollat, P. Tripp, A. Neuhaus, V.A.M. Gold, S.V. Albers, B. Daum, Electron cryo—microscopy reveals the structure of the archaeal thread filament, Nat. Commun. 13 (2022) 7411.

[93]

L.C. Beltran, V. Cvirkaite—Krupovic, J. Miller, F. Wang, M.A.B. Kreutzberger, J.B. Patkowski, T.R.D. Costa, S. Schouten, I. Levental, V.P. Conticello, E.H. Egelman, M. Krupovic, Archaeal DNA—import apparatus is homologous to bacterial conjugation machinery, Nat. Commun. 14 (2023) 666.

[94]

A. Banerjee, A. Ghosh, D.J. Mills, J. Kahnt, J. Vonck, S.V. Albers, FlaX, a unique component of the crenarchaeal archaellum, forms oligomeric ring—shaped structures and interacts with the motor ATPase FlaI, J. Biol. Chem. 287 (2012) 43322-43330.

[95]

S. Reindl, A. Ghosh, G.J. Williams, K. Lassak, T. Neiner, A.L. Henche, S.V. Albers, J.A. Tainer, Insights into FlaI functions in archaeal motor assembly and motility from structures, conformations, and genetics, Mol. Cell 49 (2013) 1069-1082.

[96]

P. Chaudhury, T. Neiner, E. D’Imprima, A. Banerjee, S. Reindl, A. Ghosh, A.S. Arvai, D.J. Mills, C. van der Does, J.A. Tainer, J. Vonck, S.V. Albers, The nucleotide—dependent interaction of FlaH and FlaI is essential for assembly and function of the archaellum motor, Mol. Microbiol. 99 (2016) 674-685.

[97]

A. Banerjee, C.L. Tsai, P. Chaudhury, P. Tripp, A.S. Arvai, J.P. Ishida, J.A. Tainer, S.V. Albers, FlaF is a beta—sandwich protein that anchors the archaellum in the archaeal cell envelope by binding the S—layer protein, Structure 23 (2015) 863-872.

[98]

C.L. Tsai, P. Tripp, S. Sivabalasarma, C. Zhang, M. Rodriguez—Franco, R.L. Wipfler, P. Chaudhury, A. Banerjee, M. Beeby, R.J. Whitaker, J.A. Tainer, S.V. Albers, The structure of the periplasmic FlaG—FlaF complex and its essential role for archaellar swimming motility, Nat. Microbiol. 5 (2020) 216-225.

[99]

M.A.B. Kreutzberger, R.R. Sonani, J. Liu, S. Chatterjee, F. Wang, A.L. Sebastian, P. Biswas, C. Ewing, W. Zheng, F. Poly, G. Frankel, B.F. Luisi, C.R. Calladine, M. Krupovic, B.E. Scharf, E.H. Egelman, Convergent evolution in the supercoiling of prokaryotic flagellar filaments, Cell 185 (2022) 3487-3500 e3414.

[100]

M.C. Gaines, M.N. Isupov, M. McLaren, C.L. Mollat, R.U. Haque, J.K. Stephenson, S. Sivabalasarma, C. Hanus, D. Kattnig, V.A.M. Gold, S. Albers, B. Daum, Towards a molecular picture of the archaeal cell surface, Nat. Commun. 15 (2024) 10401.

[101]

A.L. Henche, A. Ghosh, X. Yu, T. Jeske, E. Egelman, S.V. Albers, Structure and function of the adhesive type IV pilus of Sulfolobus acidocaldarius, Env. Microbiol 14 (2012) 3188-3202.

[102]

F. Wang, V. Cvirkaite—Krupovic, M.A.B. Kreutzberger, Z. Su, G.A.P. de Oliveira, T. Osinski, N. Sherman, F. DiMaio, J.S. Wall, D. Prangishvili, M. Krupovic, E.H. Egelman, An extensively glycosylated archaeal pilus survives extreme conditions, Nat. Microbiol. 4 (2019) 1401-1410.

[103]

F. Wang, D.P. Baquero, Z. Su, L.C. Beltran, D. Prangishvili, M. Krupovic, E.H. Egelman, The structures of two archaeal type IV pili illuminate evolutionary relationships, Nat. Commun. 11 (2020) 3424.

[104]

M.A.B. Kreutzberger, V. Cvirkaite—Krupovic, Y. Liu, D.P. Baquero, J. Liu, R.R. Sonani, C.R. Calladine, F. Wang, M. Krupovic, E.H. Egelman, The evolution of archaeal flagellar filaments, Proc. Natl. Acad. Sci. u S. a 120 (2023) e2304256120.

[105]

J. Liu, G.N. Eastep, V. Cvirkaite—Krupovic, S.T. Rich—New, M.A.B. Kreutzberger, E.H. Egelman, M. Krupovic, F. Wang, Two distinct archaeal type IV pili structures formed by proteins with identical sequence, Nat. Commun. 15 (2024) 5049.

[106]

M.C. Gaines, S. Sivabalasarma, M.N. Isupov, R.U. Haque, M. McLaren, C. Hanus, V.A.M. Gold, S.V. Albers, B. Daum, CryoEM reveals the structure of an archaeal pilus involved in twitching motility, Nat. Commun. 15 (2024) 5050.

[107]

C.T. Walsh, S. Garneau—Tsodikova, G.J. Gatto, Protein posttranslational modifications: the chemistry of proteome diversifications, Angew Chem Int Ed. 44 (2005) 7342-7372.

[108]

J.J. Cao, Q. Wang, T. Liu, N. Peng, L. Huang, Insights into the post—translational modifications of archaeal Sis10b (Alba): lysine—16 is methylated, not acetylated, and this does not regulate transcription or growth, Mol. Microbiol. 109 (2018) 192-208.

[109]

J.J. Cao, T.K. Wang, Q. Wang, X.W. Zheng, L. Huang, Functional insights into protein acetylation in the hyperthermophilic archaeon, Mol Cell Proteom. 18 (2019) 1572-1587.

[110]

R.S. Maklad H. R. , Bervoets I. , Vertommen D. , Gutierrez G. J. , Vranken W. F. , Siebers B. and Peeters E. , Protein kinase Sut1 from the Crenarchaeon Sulfolobus acidocaldarius displays tyrosine phosphorylation activity, biorixv preprint (2024).

[111]

Z.C. Jiang, Z.J. Lin, Q. Gan, P.J. Wu, X.M. Zhang, Y.X. Xiao, Q.X. She, J.F. Ni, Y.L. Shen, Q.H. Huang, The FHA domain protein ArnA functions as a global DNA damage response repressor in the hyperthermophilic archaeon, mBio 14 (2023).

[112]

X. Liu, X. Feng, G. Yuan, F. Wang, Q. Huang, J. Xu, Y. Shen, Q. She, Control of the archaeal DNA damage—responsive pathway by phosphorylation of Orc1—2, the global regulator in Saccharolobus islandicus, Nucleic. Acids. Res. 53 (2025).

[113]

P. Wu, M. Zhang, Y. Kou, S. Liang, J. Ni, Q. Huang, Y. Shen, Identification of novel components of the Ced and Ups systems in Saccharolobus islandicus REY15A, mLife 4 (2025) 17-28.

[114]

J. Cao, D. Xiong, X. Zheng, W. Yuan, L. Huang, Protein modification by a eukaryotic—like ubiquitin—related modifier in the hyperthermophilic archaeon Saccharolobus islandicus, mSystems. (2025) e0058025.

[115]

P.J. Wu, Q. Gan, X.M. Zhang, Y.F. Yang, Y.X. Xiao, Q.X. She, J.F. Ni, Q.H. Huang, Y.L. Shen, The archaeal KEOPS complex possesses a functional Gon7 homolog and has an essential function independent of the cellular t6A modification level, mLife 2 (2023) 11-27.

[116]

X. Feng, M. Sun, W. Han, Y.X. Liang, Q. She, A transcriptional factor B paralog functions as an activator to DNA damage—responsive expression in archaea, Nucleic. Acids. Res. 46 (2018) 7085-7096.

[117]

M. Ajon, S. Frols, M. van Wolferen, K. Stoecker, D. Teichmann, A.J. Driessen, D.W. Grogan, S.V. Albers, C. Schleper, UV—inducible DNA exchange in hyperthermophilic archaea mediated by type IV pili, Mol. Microbiol. 82 (2011) 807-817.

[118]

M. van Wolferen, M. Ajon, A.J. Driessen, S.V. Albers, Molecular analysis of the UV—inducible pili operon from Sulfolobus acidocaldarius, Microbiologyopen. 2 (2013) 928-937.

[119]

Z. Liu, M. Sun, J. Liu, T. Liu, Q. Ye, Y. Li, N. Peng, A CRISPR—associated factor Csa3a regulates DNA damage repair in Crenarchaeon Sulfolobus islandicus, Nucleic. Acids. Res. 48 (2020) 9681-9693.

[120]

B. Van Laer, M. Roovers, L. Wauters, J.M. Kasprzak, M. Dyzma, E. Deyaert, R.Kumar Singh, A. Feller, J.M. Bujnicki, L. Droogmans, W. Versees, Structural and functional insights into tRNA binding and adenosine N1—methylation by an archaeal Trm10 homologue, Nucleic. Acids. Res. 44 (2016) 940-953.

[121]

A. Recalde, A. Wagner, S. Sivabalasarma, A. Yurmashava, N.P. Fehr, R. Thurm, T.N. Le, C. Koebler, B. Wassmer, S.V. Albers, M. van Wolferen, New components of the community—based DNA—repair mechanism in Sulfolobales, Microlife 6 (2025) uqaf002.

[122]

M. van Wolferen, A. Shajahan, K. Heinrich, S. Brenzinger, I.M. Black, A. Wagner, A. Briegel, P. Azadi, S.V. Albers, Species—specific recognition of sulfolobales mediated by UV—inducible pili and S—layer glycosylation patterns, mBio 11 (2020).

[123]

J. Reimann, K. Lassak, S. Khadouma, T.J. Ettema, N. Yang, A.J. Driessen, A. Klingl, S.V. Albers, Regulation of archaella expression by the FHA and von Willebrand domain—containing proteins ArnA and ArnB in sulfolobus acidocaldarius, Mol. Microbiol. 86 (2012) 24-36.

[124]

L. Hoffmann, K. Anders, L.F. Bischof, X. Ye, J. Reimann, S. Khadouma, T.K. Pham, C. van der Does, P.C. Wright, L.O. Essen, S.V. Albers, Structure and interactions of the archaeal motility repression module ArnA—ArnB that modulates archaellum gene expression in sulfolobus acidocaldarius, J. Biol. Chem. 294 (2019) 7460-7471.

[125]

X. Ye, M.S. Vogt, C. van der Does, W. Bildl, U. Schulte, L.O. Essen, S.V. Albers, The phosphatase PP2A interacts with ArnA and ArnB to regulate the oligomeric State and the stability of the ArnA/B complex, Front. Microbiol. 11 (2020) 1849.

[126]

L.L. Li, A. Banerjee, L.F. Bischof, H.R. Maklad, L. Hoffmann, A.L. Henche, F. Veliz, W. Bildl, U. Schulte, A. Orell, L.O. Essen, E. Peeters, S.V. Albers, Wing phosphorylation is a major functional determinant of the Lrs14—type biofilm and motility regulator AbfR1 in, Mol. Microbiol. 105 (2017) 777-793.

[127]

L. Hoffmann, A. Schummer, J. Reimann, M.F. Haurat, A.J. Wilson, M. Beeby, B. Warscheid, S.V. Albers, Expanding the archaellum regulatory network — the eukaryotic protein kinases ArnC and ArnD influence motility of, Microbiologyopen. 6 (2017).

[128]

M.F. Haurat, A.S. Figueiredo, L. Hoffmann, L.L. Li, K. Herr, A.J. Wilson, M. Beeby, J. Schaber, S.V. Albers, ArnS, a kinase involved in starvation—induced archaellum expression, Mol. Microbiol. 103 (2017) 181-194.

[129]

A. Orell, E. Peeters, V. Vassen, S. Jachlewski, S. Schalles, B. Siebers, S.V. Albers, Lrs14 transcriptional regulators influence biofilm formation and cell motility of crenarchaea, ISMe J. 7 (2013) 1886-1898.

[130]

X. Zhang, P. Wu, R. Bai, Q. Gan, Y. Yang, H. Li, J. Ni, Q. Huang, Y. Shen, PerR functions as a redox—sensing transcription factor regulating metal homeostasis in the thermoacidophilic archaeon Saccharolobus islandicus REY15A, Nucleic. Acids. Res. 53 (2025).

[131]

J.C. Benninghoff, L. Kuschmierz, X. Zhou, A. Albersmeier, T.K. Pham, T. Busche, P.C. Wright, J. Kalinowski, K.S. Makarova, C. Brasen, H.C. Flemming, J. Wingenender, B. Siebers, Exposure to 1—butanol exemplifies the response of the thermoacidophilic archaeon sulfolobus acidocaldarius to solvent stress, Appl Env. Microbiol 87 (2021).

[132]

A. Bhowmick, A. Recalde, C. Bhattacharyya, A. Banerjee, J. Das, U.E. Rodriguez—Cruz, S.V. Albers, A. Ghosh, Role of VapBC4 toxin—antitoxin system of sulfolobus acidocaldarius in heat stress adaptation, mBio 15 (2024) e0275324.

[133]

N. Peng, W. Han, Y. Li, Y. Liang, Q. She, Genetic technologies for extremely thermophilic microorganisms of sulfolobus, the only genetically tractable genus of crenarchaea, Sci. China Life Sci. 60 (2017) 370-385.

[134]

L. Kuschmierz, A. Wagner, C. Schmerling, T. Busche, J. Kalinowski, C. Bräsen, B. Siebers, 5′—untranslated region sequences enhance plasmid—based protein production in, Front. Microbiol. 15 (2024).

[135]

Y.J. Li, S.F. Pan, Y. Zhang, M. Ren, M.X. Feng, N. Peng, L.M. Chen, Y.X. Liang, Q.X. She, Harnessing type I and type III CRISPR—Cas systems for genome editing, Nucleic. Acids. Res. 44 (2016).

[136]

J. Bost, A. Recalde, B. Wassmer, A. Wagner, B. Siebers, S.V. Albers, Application of the endogenous CRISPR—Cas type I—D system for genetic engineering in the thermoacidophilic archaeon sulfolobus acidocaldarius, Front. Microbiol. 14 (2023) 1254891.

[137]

N. van der Kolk, A. Wagner, M. Wagner, B. Wassmer, B. Siebers, S.V. Albers, Identification of XylR, the activator of Arabinose/xylose inducible regulon in sulfolobus acidocaldarius and its application for homologous protein expression , Front. Microbiol. 11 (2020).

[138]

Q. Shen, Q. Hao, Y.P. Xue, Y.G. Zheng, TnpB: transposon retention mechanisms as potential tools for gene editing, Appl. Biochem. Microbiol. 61 (2025) 1049-1062.

[139]

X. Feng, R. Xu, J. Liao, J. Zhao, B. Zhang, X. Xu, P. Zhao, X. Wang, J. Yao, P. Wang, X. Wang, W. Han, Q. She, Flexible TAM requirement of TnpB enables efficient single—nucleotide editing with expanded targeting scope, Nat. Commun. 15 (2024) 3464.

[140]

Y. Xu, T. Liu, J. Wang, B. Xiong, L. Liu, N. Peng, Reprogramming an RNA—guided archaeal TnpB endonuclease for genome editing, Cell Discov. 9 (2023) 112.

[141]

P. Zhao, X. Bi, X. Wang, X. Feng, Y. Shen, G. Yuan, Q. She, Rational design of unrestricted pRN1 derivatives and their application in the construction of a dual plasmid vector system for Saccharolobus islandicus, mLife 3 (2024) 119-128.

[142]

S. Li, Q. Huang, Y. Yang, P. Wu, J. Li, Y. Shen, J. Ni, Roles and transcriptional regulation of the endogenous cellulases in association with substrate and cellular processes in a thermoacidophilic archaeon, Bioresour. Technol. (2025) 132871.

[143]

C. Schmerling, C. Schroeder, X.X. Zhou, J. Bost, B. Wassmer, S. Ninck, T. Busche, L. Montero, F. Kaschani, O.J. Schmitz, J. Kalinowski, M. Kaiser, S.V. Albers, C. Bräsen, B. Siebers, An unusual glycerol—3—phosphate dehydrogenase in elucidates the diversity of glycerol metabolism across Archaea, Commun. Biol. 8 (2025).

[144]

J. Wolf, J. Koblitz, A. Albersmeier, J. Kalinowski, B. Siebers, D. Schomburg, M. Neumann—Schaal, Utilization of phenol as carbon source by the thermoacidophilic archaeon P2 is limited by oxygen supply and the cellular stress response, Front. Microbiol. 11 (2021).

[145]

F. Alharbi, T. Knura, B. Siebers, K. Ma, Thermostable and O(2)—insensitive pyruvate decarboxylases from thermoacidophilic archaea catalyzing the production of acetaldehyde, Biol. (Basel) (2022) 11.

[146]

V. Ashokkumar, R. Venkatkarthick, S. Jayashree, S. Chuetor, S. Dharmaraj, G. Kumar, W.H. Chen, C. Ngamcharussrivichai, Recent advances in lignocellulosic biomass for biofuels and value—added bioproducts — A critical review, Bioresour. Technol. 344 (2022) 126195.

[147]

R. Reshmy, E. Philip, A. Madhavan, R. Sirohi, A. Pugazhendhi, P. Binod, M. Kumar Awasthi, N. Vivek, V. Kumar, R. Sindhu, Lignocellulose in future biorefineries: strategies for cost—effective production of biomaterials and bioenergy, Bioresour. Technol. 344 (2022) 126241.

[148]

H. Guo, Y. Zhao, J.S. Chang, D.J. Lee, Inhibitor formation and detoxification during lignocellulose biorefinery: A review, Bioresour. Technol. 361 (2022) 127666.

[149]

R. Zhang, H. Gao, Y. Wang, B. He, J. Lu, W. Zhu, L. Peng, Y. Wang, Challenges and perspectives of green—like lignocellulose pretreatments selectable for low—cost biofuels and high—value bioproduction, Bioresour. Technol. 369 (2023) 128315.

[150]

L. Guo, K. Brugger, C. Liu, S.A. Shah, H. Zheng, Y. Zhu, S. Wang, R.K. Lillestol, L. Chen, J. Frank, D. Prangishvili, L. Paulin, Q. She, L. Huang, R.A. Garrett, Genome analyses of Icelandic strains of Sulfolobus islandicus, model organisms for genetic and virus—host interaction studies, J. Bacteriol. 193 (2011) 1672-1680.

[151]

Q. She, R.K. Singh, F. Confalonieri, Y. Zivanovic, G. Allard, M.J. Awayez, C.C. Chan—Weiher, I.G. Clausen, B.A. Curtis, A. De Moors, G. Erauso, C. Fletcher, P.M. Gordon, I. Heikamp—de Jong, A.C. Jeffries, C.J. Kozera, N. Medina, X. Peng, H.P. Thi—Ngoc, P. Redder, M.E. Schenk, C. Theriault, N. Tolstrup, R.L. Charlebois, W.F. Doolittle, M. Duguet, T. Gaasterland, R.A. Garrett, M.A. Ragan, C.W. Sensen, J. Van der Oost, The complete genome of the crenarchaeon Sulfolobus solfataricus P2, Proc. Natl. Acad. Sci. u S. a 98 (2001) 7835-7840.

[152]

H.D. Sakai, N. Kurosawa, Complete genome sequence of the hyperthermophilic and acidophilic archaeon Saccharolobus caldissimus Strain HS—3(T), Microbiol. Resour. Announc. 11 (2022) e0107821.

[153]

L. Chen, K. Brügger, M. Skovgaard, P. Redder, Q. She, E. Torarinsson, B. Greve, M. Awayez, A. Zibat, H.P. Klenk, R.A. Garrett, The genome of sulfolobus acidocaldarius, a model organism of the Crenarchaeota, J. Bacteriol. 187 (2005) 4992-4999.

[154]

D.J. Willard, M.J.H. Manesh, R.G. Bing, R.M. Kelly, Complete genome sequence for the thermoacidophilic archaeon sulfuracidifex (f. Sulfolobus) metallicus DSM 6482, Microbiol. Resour. Announc. 13 (2024) e0098123.

[155]

M.J.H. Manesh, R.G. Bing, D.J. Willard, R.M. Kelly, Complete genome sequence for the thermoacidophilic archaeon metallosphaera sedula (DSM:5348), Microbiol. Resour. Announc. 13 (2024) e0122823.

[156]

X.Y. You, C. Liu, S.Y. Wang, C.Y. Jiang, S.A. Shah, D. Prangishvili, Q. She, S.J. Liu, R.A. Garrett, Genomic analysis of Acidianus hospitalis W1 a host for studying crenarchaeal virus and plasmid life cycles, Extremophiles. 15 (2011) 487-497.

[157]

H.D. Sakai, N. Kurosawa, Complete genome sequence of the sulfodiicoccus acidiphilus strain HS—1(T), the first crenarchaeon that lacks polB3, isolated from an acidic hot spring in Ohwaku—dani, Hakone, Japan, BMC. Res. Notes. 12 (2019) 444.

[158]

J.A. Counts, N.P. Vitko, R.M. Kelly, Genome sequences of five type strain members of the Archaeal Family Sulfolobaceae, Acidianus ambivalens, acidianus infernus, stygiolobus azoricus, sulfuracidifex metallicus, and sulfurisphaera ohwakuensis, Microbiol. Resour. Announc. 9 (2020).

[159]

D. Limauro, R. Cannio, G. Fiorentino, M. Rossi, S. Bartolucci, Identification and molecular characterization of an endoglucanase gene, celS, from the extremely thermophilic archaeon Sulfolobus solfataricus, Extremophiles. 5 (2001) 213-219.

[160]

M. Girfoglio, M. Rossi, R. Cannio, Cellulose degradation by Sulfolobus solfataricus requires a cell—anchored endo— 𝛽—1—4—glucanase , J. Bacteriol. 194 (2012) 5091-5100.

[161]

Y. Huang, G. Krauss, S. Cottaz, H. Driguez, G. Lipps, A highly acid—stable and thermostable endo—beta—glucanase from the thermoacidophilic archaeon Sulfolobus solfataricus, Biochem. J. 385 (2005) 581-588.

[162]

L. Maurelli, A. Giovane, A. Esposito, M. Moracci, I. Fiume, M. Rossi, A. Morana, Evidence that the xylanase activity from Sulfolobus solfataricus Oalpha is encoded by the endoglucanase precursor gene (sso1354) and characterization of the associated cellulase activity, Extremophiles. 12 (2008) 689-700.

[163]

T. Zheng, Q. Huang, C. Zhang, J. Ni, Q. She, Y. Shen, Development of a simvastatin selection marker for a hyperthermophilic acidophile, Sulfolobus isl. Appl Env. Microbiol 78 (2012) 568-574.

[164]

R. Nucci, M. Moracci, C. Vaccaro, N. Vespa, M. Rossi, Exo—glucosidase activity and substrate specificity of the beta—glycosidase isolated from the extreme thermophile Sulfolobus solfataricus, Biotechnol. Appl. Biochem. 17 (1993) 239-250.

[165]

S. Lalithambika, L. Peterson, K. Dana, P. Blum, Carbohydrate hydrolysis and transport in the extreme thermoacidophile Sulfolobus solfataricus, Appl Env. Microbiol 78 (2012) 7931-7938.

[166]

P. Wang, C. Tang, Y. Liu, J. Yang, D. Fan, Biotransformation of high concentrations of ginsenoside substrate into compound K by 𝛽—glycosidase from Sulfolobus solfataricus , Genes 14 (2023).

[167]

D.A. Cowan, S.V. Albers, G. Antranikian, H. Atomi, B. Averhoff, M. Basen, A.J.M. Driessen, M. Jebbar, Z. Kelman, M. Kerou, J. Littlechild, V. Müller, P. Schönheit, B. Siebers, K. Vorgias, Extremophiles in a changing world, Extremophiles. 28 (2024) 26.

[168]

F. De Lise, R. Iacono, M. Moracci, A. Strazzulli, B. Cobucci—Ponzano, Archaea as a model system for Molecular biology and Biotechnology, Biomolecules. 13 (2023).

[169]

Y. Yang, J. Liu, X. Fu, F. Zhou, S. Zhang, X. Zhang, Q. Huang, M. Krupovic, Q. She, J. Ni, Y. Shen, A novel RHH family transcription factor aCcr1 and its viral homologs dictate cell cycle progression in archaea, Nucleic. Acids. Res. 51 (2023) 1707-1723.

[170]

J.K. Guterl, D. Garbe, J. Carsten, F. Steffler, B. Sommer, S. Reisse, A. Philipp, M. Haack, B. Ruhmann, A. Koltermann, U. Kettling, T. Bruck, V. Sieber, Cell—free metabolic engineering: production of chemicals by minimized reaction cascades, ChemSusChem. 5 (2012) 2165-2172.

[171]

P. Pony, C. Rapisarda, L. Terradot, E. Marza, R. Fronzes, Filamentation of the bacterial bi—functional alcohol/aldehyde dehydrogenase AdhE is essential for substrate channeling and enzymatic regulation, Nat. Commun. 11 (2020).

[172]

F. Alharbi, T. Knura, B. Siebers, K. Ma, Thermostable and O—insensitive pyruvate decarboxylases from thermoacidophilic archaea catalyzing the production of acetaldehyde, Biol.—Basel 11 (2022).

[173]

S. Panda, A. Akcil, N. Pradhan, H. Deveci, Current scenario of chalcopyrite bioleaching: a review on the recent advances to its heap—leach technology, Bioresour. Technol. 196 (2015) 694-706.

[174]

D. Kolbl, A. Memic, H. Schnideritsch, D. Wohlmuth, G. Klosch, M. Albu, G. Giester, M. Bujdos, T. Milojevic, Thermoacidophilic bioleaching of industrial metallic steel waste product, Front. Microbiol. 13 (2022) 864411.

[175]

C. Ai, Z. Yan, H. Chai, T. Gu, J. Wang, L. Chai, G. Qiu, W. Zeng, Increased chalcopyrite bioleaching capabilities of extremely thermoacidophilic Metallosphaera sedula inocula by mixotrophic propagation, J. Ind. Microbiol. Biotechnol. 46 (2019) 1113-1127.

[176]

G.H. Wheaton, N.P. Vitko, J.A. Counts, J.A. Dulkis, I. Podolsky, A. Mukherjee, R.M. Kelly, Extremely thermoacidophilic metallosphaera species mediate mobilization and oxidation of vanadium and molybdenum oxides, Appl Env. Microbiol 85 (2019).

[177]

T. Milojevic, D. Kolbl, L. Ferriere, M. Albu, A. Kish, R.L. Flemming, C. Koeberl, A. Blazevic, Z. Zebec, S.K.R. Rittmann, C. Schleper, M. Pignitter, V. Somoza, M.P. Schimak, A.N. Rupert, Exploring the microbial biotransformation of extraterrestrial material on nanometer scale, Sci. Rep. 9 (2019) 18028.

[178]

N. Yoshida, M. Nakasato, N. Ohmura, A. Ando, H. Saiki, M. Ishii, Y. Igarashi, Acidianus manzaensis sp. nov., a novel thermoacidophilic archaeon growing autotrophically by the oxidation of H2 with the reduction of Fe3+, Curr. Microbiol. 53 (2006) 406-411.

[179]

C.E. Hart, D. Gorman—Lewis, Energetic investigations of Acidianus ambivalens metabolism during anaerobic sulfur reduction and comparisons to aerobic sulfur oxidation, Extremophiles. 29 (2025) 19.

[180]

M. Ishii, T. Miyake, T. Satoh, H. Sugiyama, Y. Oshima, T. Kodama, Y. Igarashi, Autotrophic carbon dioxide fixation in Acidianus brierleyi, Arch. Microbiol. 166 (1996) 368-371.

[181]

M. Hugler, H. Huber, K.O. Stetter, G. Fuchs, Autotrophic CO2 fixation pathways in archaea (Crenarchaeota), Arch. Microbiol. 179 (2003) 160-173.

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