Causal association between gut microbiota and pulmonary embolism: a 2-sample Mendelian randomization study

Simeng He , Ruixue Song , Zhengxuan Li , Shengning Shi , Jiaojiao Pang

Emergency and Critical Care Medicine ›› 2025, Vol. 5 ›› Issue (4) : 175 -182.

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Emergency and Critical Care Medicine ›› 2025, Vol. 5 ›› Issue (4) :175 -182. DOI: 10.1097/EC9.0000000000000157
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Causal association between gut microbiota and pulmonary embolism: a 2-sample Mendelian randomization study
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Abstract

Background: Pulmonary embolism (PE) is the third most common cause of cardiovascular-related deaths globally; however, the causal relationship between gut microbiota and PE remains unclear. This study aimed to explore the impact of gut microbiota on PE.

Methods: This study utilized a 2-sample Mendelian randomization (MR) design to analyze gut microbiota genome-wide association study data from the MiBioGen database and PE data from the FinnGen database. Statistical methods, such as inverse variance-weighted, MR-Egger, weighted median, and weighted modes, were used to investigate the causal relationship between the gut microbiota and PE. Moreover, a sensitivity analysis was conducted to assess the robustness of the results.

Results: MR analysis revealed that gut microbiota genera Intestinimonas (odds ratio [OR]: 0.797; 95% confidence interval [CI]: 0.666-0.952; P = 0.013) and Roseburia (OR: 0.752; 95% CI: 0.575-0.984; P = 0.038) have a protective effect on PE. Conversely, an increased abundance of the phylum Lentisphaerae (OR: 1.217; 95% CI: 1.033-1.434; P = 0.019), class Lentisphaeria (OR: 1.219; 95% CI: 1.010-1.471; P = 0.039), order Gastranaerophilales (OR: 1.209; 95% CI: 1.017-1.437; P = 0.031), order Victivallales (OR: 1.219; 95% CI: 1.010-1.471; P = 0.039), and the genus Ruminococcus gauvreauii (OR: 1.274; 95% CI: 1.015-1.599; P = 0.037) increases the risk of developing PE. Sensitivity analysis indicated no heterogeneity or horizontal pleiotropy.

Conclusion: Seven gut microbiotas, including the phylum Lentisphaerae, class Lentisphaeria, orders Gastranaerophilales and Victivallales, and genera R. gauvreauii, Intestinimonas, and Roseburia, were causally associated with PE. These findings may contribute significantly to the prevention of PE through dietary modifications and microbiome interventions.

Keywords

Causal relationship / Gut microbiota / Mendelian randomization / Pulmonary embolism

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Simeng He, Ruixue Song, Zhengxuan Li, Shengning Shi, Jiaojiao Pang. Causal association between gut microbiota and pulmonary embolism: a 2-sample Mendelian randomization study. Emergency and Critical Care Medicine, 2025, 5(4): 175-182 DOI:10.1097/EC9.0000000000000157

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Conflict of interest statement

The authors declare no conflict of interest.

Author contributions

He S conceived the study, completed the database search, screened and extracted data, and wrote the manuscript. Song R analyzed and interpreted the data. Li Z inspected and verified the data. Shi S revised the finished manuscript. Pang J provided suggestions on summarizations and statistical analysis. All authors have read and approved the final version of this manuscript.

Funding

This study was supported by National Natural Science Foundation of China (82302433), Natural Science Foundation of Shandong Province (ZR2023QH324, ZR2022QH018), Taishan Young Scholar Program of Shandong Province (tsqn202306353), China InternationalMedical Foundation (Z-2017-24-2421).

Ethical approval of studies and informed consent

This study used only publicly available data from studies involving human participants, with written informed consent and approval by their respective institutional ethics review committees.

Acknowledgment

The data analyzed in this study were provided by MiBioGen consortium, FinnGen, and UK Biobank. We gratefully acknowledge their contributing studies and the participants in the corresponding studies without whom this effort would not be possible.

References

[1]

Pulmonary embolism. Nat Rev Dis Primers. 2018; 4:18031. doi:10.1038/nrdp.2018.31

[2]

Di Nisio M, van Es N, Büller HR. Deep vein thrombosis and pulmonary embolism. Lancet. 2016; 388(10063):3060-3073. doi:10.1016/s0140-6736(16)30514-1

[3]

Tehrani BN, Batchelor WB, Spinosa D. High-risk acute pulmonary embolism: where do we go from here. J Am Coll Cardiol. 2024; 83(1):44-46. doi:10.1016/j.jacc.2023.11.001

[4]

Goldberg JB, Giri J, Kobayashi T, et al. Surgical management and mechanical circulatory support in high-risk pulmonary embolisms: historical context, current status, and future directions: a scientific statement from the American Heart Association. Circulation. 2023; 147(9):e628-e647. doi:10.1161/cir.0000000000001117

[5]

Baglin T, Douketis J, Tosetto A, et al. Pulmonary embolism. J Thromb Haemost. 2010; 8(11):2436-2442. doi:10.1111/j.1538-7836.2010.04022.x

[6]

Huisman MV, Barco S, Cannegieter SC, et al. Does the clinical presentation and extent of venous thrombosis predict likelihood and type of recurrence? A patient-level meta-analysis. Nat Rev Dis Primers. 2018; 4:18028. doi:10.1038/nrdp.2018.28

[7]

Lijfering WM, Rosendaal FR, Cannegieter SC. Risk factors for venous thrombosis—current understanding from an epidemiological point of view. Br J Haematol. 2010; 149(6):824-833. doi:10.1111/j.1365-2141.2010.08206.x

[8]

Reitsma PH. Genetics in thrombophilia. An update. Hamostaseologie. 2015; 35(1):47-51. doi:10.5482/hamo-14-11-0062

[9]

Wang L, Gong Z, Zhang X, et al. Gut microbial bile acid metabolite skews macrophage polarization and contributes to high-fat diet-induced colonic inflammation. Gut Microbes. 2020; 12(1):1-20. doi:10.1080/19490976.2020.1819155

[10]

Wei YH, Ma X, Zhao JC, Wang XQ, Gao CQ. Succinate metabolism and its regulation of host-microbe interactions. Gut Microbes. 2023; 15(1):2190300. doi:10.1080/19490976.2023.2190300

[11]

Si H, Yang Q, Hu H, et al. Colorectal cancer occurrence and treatment based on changes in intestinal flora. Semin Cancer Biol. 2021; 70:3-10. doi:10.1016/j.semcancer.2020.05.004

[12]

Simpson BW, Trent MS. Pushing the envelope: LPS modifications and their consequences. Nat Rev Microbiol. 2019; 17(7):403-416. doi:10.1038/s41579-019-0201-x

[13]

Song D, Ye X, Xu H, Liu SF. Activation of endothelial intrinsic NF-kappaB pathway impairs protein C anticoagulation mechanism and promotes coagulation in endotoxemic mice. Blood. 2009; 114(12):2521-2529. doi:10.1182/blood-2009-02-205914

[14]

Harmon MBA, Heijnen NFL, de Bruin S, et al. Induced normothermia ameliorates the procoagulant host response in human endotoxaemia. Br J Anaesth. 2021; 126(6):1111-1118. doi:10.1016/j.bja.2021.02.033

[15]

Hasan RA, Koh AY, Zia A. The gut microbiome and thromboembolism. Thromb Res. 2020; 189:77-87. doi:10.1016/j.thromres.2020.03.003

[16]

Castellani CA, Longchamps RJ, Sumpter JA, et al. Mitochondrial DNA copy number can influence mortality and cardiovascular disease via methylation of nuclear DNA CpGs. Genome Med. 2020; 12(1):84. doi:10.1186/s13073-020-00778-7

[17]

Li P, Wang H, Guo L, et al. Association between gut microbiota and preeclampsia-eclampsia: a two-sample Mendelian randomization study. BMC Med. 2022; 20(1):443. doi:10.1186/s12916-022-02657-x

[18]

Ni JJ, Xu Q, Yan SS, et al. Gut microbiota and psychiatric disorders: a two-sample Mendelian randomization study. Front Microbiol. 2021; 12:737197. doi:10.3389/fmicb.2021.737197

[19]

Meng C, Deng P, Miao R, et al. Gut microbiome and risk of ischaemic stroke: a comprehensive Mendelian randomization study. Eur J Prev Cardiol. 2023; 30(7):613-620. doi:10.1093/eurjpc/zwad052

[20]

Li C, Liu C, Li N. Causal associations between gut microbiota and adverse pregnancy outcomes: a two-sample Mendelian randomization study. Front Microbiol. 2022; 13:1059281. doi:10.3389/fmicb.2022.1059281

[21]

Cammann D, Lu Y, Cummings MJ, et al. Genetic correlations between Alzheimer’s disease and gut microbiome genera. Sci Rep. 2023; 13(1):5258. doi:10.1038/s41598-023-31730-5

[22]

Kurilshikov A, Medina-Gomez C, Bacigalupe R, et al. Large-scale association analyses identify host factors influencing human gut microbiome composition. Nat Genet. 2021; 53(2):156-165. doi:10.1038/s41588-020-00763-1

[23]

Zhang QL, Liu XL, Shen Q, Wang XF, Pang JJ, Chen YG. Carnitine is causally associated with susceptibility and severity of sepsis: a Mendelian randomization study. Emerg Crit Care Med. 2024; 4(4):p149-p154. doi:10.1097/EC9.0000000000000120

[24]

Xu JH, He XW, Li Q, et al. Higher platelet-to-lymphocyte ratio is associated with worse outcomes after intravenous thrombolysis in acute ischaemic stroke. Front Neurol. 2019; 10:1192. doi:10.3389/fneur.2019.01192

[25]

Song BSY, Liu D, Li G. Acute pulmonary embolism immediately after cesarean section despite dilatation of the left ventricle: a case report and literature review. Emerg Crit Care Med. 2023; 3(3):130-135. doi:10.1097/EC9.0000000000000073

[26]

Robertson L, Yeoh SE, Broderick C, Stansby G, Agarwal R. Effect of testing for cancer on cancer- or venous thromboembolism (VTE)-related mortality and morbidity in people with unprovoked VTE. Cochrane Database Syst Rev. 2018; 11(11):Cd010837. doi:10.1002/14651858.CD010837.pub4

[27]

Lee J, Heo J, Kang H. miR-92b-3p-TSC1 axis is critical for mTOR signaling-mediated vascular smooth muscle cell proliferation induced by hypoxia. Cell Death Differ. 2019; 26(9):1782-1795. doi:10.1038/s41418-018-0243-z

[28]

Bezemer ID, Doggen CJ, Vos HL, Rosendaal FR. No association between the common MTHFR 677C->T polymorphism and venous thrombosis: results from the MEGA study. Arch Intern Med. 2007; 167(5):497-501. doi:10.1001/archinte.167.5.497

[29]

Vatanen T, Plichta DR, Somani J, et al. Genomic variation and strain-specific functional adaptation in the human gut microbiome during early life. Nat Microbiol. 2019; 4(3):470-479. doi:10.1038/s41564-018-0321-5

[30]

Zeevi D, Korem T, Godneva A, et al. Structural variation in the gut microbiome associates with host health. Nature. 2019; 568(7750):43-48. doi:10.1038/s41586-019-1065-y

[31]

Liu X, Chen Y, Zhang S, Dong L. Gut microbiota-mediated immunomodulation in tumor. J Exp Clin Cancer Res. 2021; 40(1):221. doi:10.1186/s13046-021-01983-x

[32]

Quigley EMM. Microbiota-brain-gut axis and neurodegenerative diseases. Curr Neurol Neurosci Rep. 2017; 17(12):94. doi:10.1007/s11910-017-0802-6

[33]

Góralczyk-Bińkowska A, Szmajda-Krygier D, Kozłowska E. The microbiota-gut-brain axis in psychiatric disorders. Int J Mol Sci. 2022; 23(19). doi:10.3390/ijms231911245

[34]

Zhang T, Cheng JK, Hu YM. Gut microbiota as a promising therapeutic target for age-related sarcopenia. Ageing Res Rev. 2022; 81:101739. doi:10.1016/j.arr.2022.101739

[35]

Zhang Z, Chen H, Huang J, et al. Early administration of vancomycin inhibits pulmonary embolism by remodeling gut microbiota. J Pers Med. 2023; 13(3). doi:10.3390/jpm13030537

[36]

Zhu W, Gregory JC, Org E, et al. Gut microbial metabolite TMAO enhances platelet hyperreactivity and thrombosis risk. Cell. 2016; 165(1):111-124. doi:10.1016/j.cell.2016.02.011

[37]

Reiner MF, Müller D, Gobbato S, et al. Gut microbiota-dependent trimethylamine-N-oxide (TMAO) shows a U-shaped association with mortality but not with recurrent venous thromboembolism. Thromb Res. 2019; 174:40-47. doi:10.1016/j.thromres.2018.12.011

[38]

Tang WH, Wang Z, Levison BS, et al. Intestinal microbial metabolism of phosphatidylcholine and cardiovascular risk. N Engl J Med. 2013; 368(17):1575-1584. doi:10.1056/NEJMoa1109400

[39]

Wang Z, Tang WH, Buffa JA, et al. Prognostic value of choline and betaine depends on intestinal microbiota-generated metabolite trimethylamine-N-oxide. Eur Heart J. 2014; 35(14):904-910. doi:10.1093/eurheartj/ehu002

[40]

Fraser K, Roy NC, Goumidi L, et al. Plasma biomarkers and identification of resilient metabolic disruptions in patients with venous thromboembolism using a metabolic systems approach. Arterioscler Thromb Vasc Biol. 2020; 40(10):2527-2538. doi:10.1161/atvbaha.120.314480

[41]

Davey L, Halperin SA, Lee SF. Thiol-disulfide exchange in gram-positive Firmicutes. Trends Microbiol. 2016; 24(11):902-915. doi:10.1016/j.tim.2016.06.010

[42]

Sun Y, Zhang S, Nie Q, et al. Gut Firmicutes: relationship with dietary fiber and role in host homeostasis. Crit Rev Food Sci Nutr. 2023; 63(33):12073-12088. doi:10.1080/10408398.2022.2098249

[43]

Ling Z, Cheng Y, Yan X, et al. Alterations of the fecal microbiota in Chinese patients with multiple sclerosis. Front Immunol. 2020; 11:590783. doi:10.3389/fimmu.2020.590783

[44]

Shen Z, Luo W, Tan B, et al. Roseburia intestinalis stimulates TLR5-dependent intestinal immunity against Crohn’s disease. EBioMedicine. 2022; 85:104285. doi:10.1016/j.ebiom.2022.104285

[45]

Zhao C, Bao L, Qiu M, et al. Commensal cow Roseburia reduces gut-dysbiosis-induced mastitis through inhibiting bacterial translocation by producing butyrate in mice. Cell Rep. 2022; 41(8):111681. doi:10.1016/j.celrep.2022.111681

[46]

Kang X, Liu C, Ding Y, et al. Roseburia intestinalis generated butyrate boosts anti-PD-1 efficacy in colorectal cancer by activating cytotoxic CD8(+) T cells. Gut. 2023; 72(11):2112-2122. doi:10.1136/gutjnl-2023-330291

[47]

Tamanai-Shacoori Z, Smida I, Bousarghin L, et al. Roseburia spp.: a marker of health? Future Microbiol 2017; 12:157-170. doi:10.2217/fmb-2016-0130

[48]

Cen L, Qin L, Chen W, et al. Causal relationship between gut microbiota and pulmonary embolism: an analysis using mendelian randomization. Pol J Microbiol. 2025; 74(2):153-164. doi:10.33073/pjm-2025-013

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