Synthetic lethality in cancer therapy: Mechanisms, models and clinical translation for overcoming therapeutic resistance

Junyan Li , Liyuan Zhang , Yan Shang , Juan Liu , Hailong Zhao

Clinical and Translational Medicine ›› 2026, Vol. 16 ›› Issue (1) : e70586

PDF
Clinical and Translational Medicine ›› 2026, Vol. 16 ›› Issue (1) :e70586 DOI: 10.1002/ctm2.70586
REVIEW
Synthetic lethality in cancer therapy: Mechanisms, models and clinical translation for overcoming therapeutic resistance
Author information +
History +
PDF

Abstract

Background and Rationale: Synthetic lethality (SL)-based strategies hold significant promise for overcoming therapeutic resistance, a critical bottleneck in cancer treatment where cancer cells evade anticancer therapies, leading to diminished efficacy or treatment failure. The core of SL lies in exploiting tumour-specific vulnerabilities: drug-resistant cells often acquire unique genetic defects or compensatory adaptive responses, and SL strategies selectively target genes or pathways dependent on these vulnerabilities to induce specific cell death, thereby reversing resistance.

Content and Focus: This review systematically elaborates on SL mechanisms and the multi-faceted nature of tumour drug resistance, then focuses on how SL counteracts resistant phenotypes by leveraging resistant cells’ vulnerabilities. We further delineate SL applications in preclinical resistance models, highlight representative SL-related drugs and predictive biomarkers and critically analyse challenges in clinical translation.

Conclusion: By integrating mechanistic insights, preclinical validation and translational perspectives, this review aims to provide novel insights for precision therapy and a foundational reference to advance SL strategies in overcoming tumour resistance and facilitating their clinical implementation.

Keywords

cancer therapeutic resistance / clinical translation / DNA damage response reprogramming / genome-scale CRISPR screening / synthetic lethality

Cite this article

Download citation ▾
Junyan Li, Liyuan Zhang, Yan Shang, Juan Liu, Hailong Zhao. Synthetic lethality in cancer therapy: Mechanisms, models and clinical translation for overcoming therapeutic resistance. Clinical and Translational Medicine, 2026, 16(1): e70586 DOI:10.1002/ctm2.70586

登录浏览全文

4963

注册一个新账户 忘记密码

References

[1]

Gong X, Liu C, Tang H, et al. Application and research progress of synthetic lethality in the development of anticancer therapeutic drugs [J]. Front Oncol. 2024; 14:1460412.

[2]

Li X, Zou L. BRCAness, DNA gaps, and gain and loss of PARP inhibitor-induced synthetic lethality [J]. J Clin Invest. 2024; 134(14):e181062.

[3]

Bukowski K, Kciuk M, Kontek R. Mechanisms of multidrug resistance in cancer chemotherapy [J]. Int J Mol Sci. 2020; 21(9): 3233.

[4]

Vaidyanathan A, Sawers L, Gannon AL, et al. ABCB1 (MDR1) induction defines a common resistance mechanism in paclitaxel- and olaparib-resistant ovarian cancer cells [J]. Br J Cancer. 2016; 115(4): 431-441.

[5]

Puris E, Fricker G, Gynther M. The role of solute carrier transporters in efficient anticancer drug delivery and therapy [J]. Pharmaceutics. 2023; 15(2): 364.

[6]

Cipponi A, Goode DL, Bedo J, et al. MTOR signaling orchestrates stress-induced mutagenesis, facilitating adaptive evolution in cancer [J]. Science. 2020; 368(6495): 1127-1131.

[7]

Morana O, Wood W, Gregory CD. The apoptosis paradox in cancer [J]. Int J Mol Sci. 2022; 23(3): 1328.

[8]

Konieczkowski DJ, Johannessen CM, Garraway LA. A convergence-based framework for cancer drug resistance [J]. Cancer Cell. 2018; 33(5): 801-815.

[9]

Mohyuddin GR, Aziz M, Britt A, et al. Similar response rates and survival with PARP inhibitors for patients with solid tumors harboring somatic versus Germline BRCA mutations: a Meta-analysis and systematic review [J]. BMC Cancer. 2020; 20(1): 507.

[10]

Reck M, Carbone DP, Garassino M, et al. Targeting KRAS in non-small-cell lung cancer: recent progress and new approaches [J]. Ann Oncol. 2021; 32(9): 1101-1110.

[11]

Kang J, Chen HJ, Zhang XC, et al. Heterogeneous responses and resistant mechanisms to crizotinib in ALK-positive advanced non-small cell lung cancer [J]. Thorac Cancer. 2018; 9(9): 1093-1103.

[12]

Smith HL, Southgate H, Tweddle DA, et al. DNA damage checkpoint kinases in cancer [J]. Expert Rev Mol Med. 2020; 22:e2.

[13]

Magits W, Steklov M, Jang H, et al. K128 ubiquitination constrains RAS activity by expanding its binding interface with GAP proteins [J]. Embo j. 2024; 43(14): 2862-2877.

[14]

Lord CJ, Ashworth A. PARP inhibitors: synthetic lethality in the clinic [J]. Science. 2017; 355(6330): 1152-1158.

[15]

Li S, Topatana W, Juengpanich S, et al. Development of synthetic lethality in cancer: molecular and cellular classification [J]. Signal Transduct Target Ther. 2020; 5(1): 241.

[16]

Cheng K, Nair NU, Lee JS, et al. Synthetic lethality across normal tissues is strongly associated with cancer risk, onset, and tumor suppressor specificity [J]. Sci Adv. 2021; 7(1):eabc2100.

[17]

Xin Y, Zhang Y. Paralog-based synthetic lethality: rationales and applications [J]. Front Oncol. 2023; 13:1168143.

[18]

Vallée F, Casás-Selves M, Bubenik M, et al. Discovery of RP-1664: a first-in-class orally bioavailable, selective PLK4 inhibitor [J]. J Med Chem. 2025; 68(11): 10631-10647.

[19]

Ngoi NYL, Tang TY, Gaspar CF, et al. Methylthioadenosine phosphorylase genomic loss in advanced gastrointestinal cancers [J]. Oncologist. 2024; 29(6): 493-503.

[20]

Bray C, Balcells C, Mcneish IA, et al. The potential and challenges of targeting MTAP-negative cancers beyond synthetic lethality [J]. Front Oncol. 2023; 13:1264785.

[21]

Mirati Therapeutics Reports Third Quarter 2022 Financial Results and Recent Corporate Updates [Z]. Nov 08, 2022

[22]

Ceccaldi R, Liu JC, Amunugama R, et al. Homologous-recombination-deficient tumours are dependent on Polθ-mediated repair [J]. Nature. 2015; 518(7538): 258-262.

[23]

Olsen SN, Anderson B, Hatton C, et al. Combined inhibition of KAT6A/B and Menin reverses estrogen receptor-driven gene expression programs in breast cancer [J]. Cell Rep Med. 2025; 6(7):102192.

[24]

Liu QW, Yang ZW, Tang QH, et al. The power and the promise of synthetic lethality for clinical application in cancer treatment [J]. Biomed Pharmacother. 2024; 172:116288.

[25]

Cunningham CE, Vizeacoumar FS, Zhang Y, et al. Identification of targetable vulnerabilities of PLK1-overexpressing cancers by synthetic dosage lethality [J]. Cell Genom. 2025; 5(6):100876.

[26]

Jiang Z, Li X, Xiao Z, et al. Combined inhibition by PRMT5 and MAT2A demonstrates a strong synthetic lethality in MTAP homozygous-deficient glioma models [J]. Cell Death Discov. 2025; 11(1): 261.

[27]

Bedard GT, Gilaj N, Peregrina K, et al. Combined inhibition of MTAP and MAT2a mimics synthetic lethality in tumor models via PRMT5 inhibition [J]. J Biol Chem. 2024; 300(1):105492.

[28]

Kim H, Xu H, George E, et al. Combining PARP with ATR inhibition overcomes PARP inhibitor and platinum resistance in ovarian cancer models [J]. Nat Commun. 2020; 11(1): 3726.

[29]

Kinose Y, Xu H, Kim H, et al. Dual blockade of BRD4 and ATR/WEE1 pathways exploits ARID1A loss in clear cell ovarian cancer [J]. Res Sq. 2023.

[30]

Megino-Luque C, SISÓ P, Mota-Martorell N, et al. ARID1A-deficient cells require HDAC6 for progression of endometrial carcinoma [J]. Mol Oncol. 2022; 16(11): 2235-2259.

[31]

Berns K, Caumanns JJ, Hijmans EM, et al. ARID1A mutation sensitizes most ovarian clear cell carcinomas to BET inhibitors [J]. Oncogene. 2018; 37(33): 4611-4625.

[32]

Arora S, Balasubramaniam S, Zhang H, et al. FDA approval summary: olaparib monotherapy or in combination with bevacizumab for the maintenance treatment of patients with advanced ovarian cancer [J]. Oncologist. 2021; 26(1): e164-e72.

[33]

Smith HL, Willmore E, Prendergast L, et al. ATR, CHK1 and WEE1 inhibitors cause HR repair deficiency to induce synthetic lethality with PARP inhibitors [J]. Br J Cancer. 2024; 131(5): 905-917.

[34]

Drago JZ, Modi S, Chandarlapaty S. Unlocking the potential of antibody-drug conjugates for cancer therapy [J]. Nat Rev Clin Oncol. 2021; 18(6): 327-344.

[35]

Cen J, Zhang R, Zhao T, et al. A water-soluble quercetin conjugate with triple targeting exerts neuron-protective effect on cerebral ischemia by mitophagy activation [J]. Adv Healthc Mater. 2022; 11(22):e2200817.

[36]

Loganzo F, Tan X, Sung M, et al. Tumor cells chronically treated with a trastuzumab-maytansinoid antibody-drug conjugate develop varied resistance mechanisms but respond to alternate treatments [J]. Mol Cancer Ther. 2015; 14(4): 952-963.

[37]

Anish Ruban S, Raj FJ, Thangaraj P. Phytochemical intervention in BCRP-driven cancer drug resistance: A comprehensive review [J]. Biochim Biophys Acta Rev Cancer 2025; 1880(3):189349.

[38]

Nelson DR. A world of cytochrome P450s [J]. Philos Trans R Soc Lond B Biol Sci. 2013; 368(1612):20120430.

[39]

Liu H, Li G, Shen C, et al. B7-H3-mediated deubiquitination stabilizing CYP1B1 expression promotes chemotherapy resistance in colorectal cancer [J]. Biochim Biophys Acta Mol Basis Dis. 2025; 1871(5):167771.

[40]

Zhou L, Chen W, Cao C, et al. Design and synthesis of α-naphthoflavone chimera derivatives able to eliminate cytochrome P450 (CYP)1B1-mediated drug resistance via targeted CYP1B1 degradation [J]. Eur J Med Chem. 2020; 189:112028.

[41]

Sharma R, Chiang YH, Chen HC, et al. Dual inhibition of CYP17A1 and HDAC6 by abiraterone-installed hydroxamic acid overcomes temozolomide resistance in glioblastoma through inducing DNA damage and oxidative stress [J]. Cancer Lett. 2024; 586:216666.

[42]

Hu W, Cui X, Liu H, et al. CYP3A5 promotes glioblastoma stemness and chemoresistance through fine-tuning NAD(+)/NADH ratio [J]. J Exp Clin Cancer Res. 2025; 44(1): 3.

[43]

Chmielecki J, Mok T, Wu YL, et al. Analysis of acquired resistance mechanisms to osimertinib in patients with EGFR-mutated advanced non-small cell lung cancer from the AURA3 trial [J]. Nat Commun. 2023; 14(1): 1071.

[44]

Chmielecki J, Gray JE, Cheng Y, et al. Candidate mechanisms of acquired resistance to first-line osimertinib in EGFR-mutated advanced non-small cell lung cancer [J]. Nat Commun. 2023; 14(1): 1070.

[45]

Qu X, Hamidi H, Johnson RM, et al. Ligand-activated EGFR/MAPK signaling but not PI3K, are key resistance mechanisms to EGFR-therapy in colorectal cancer [J]. Nat Commun. 2025; 16(1): 4332.

[46]

Lubrano S, Cervantes-Villagrana RD, Faraji F, et al. FAK inhibition combined with the RAF-MEK clamp avutometinib overcomes resistance to targeted and immune therapies in BRAF V600E melanoma [J]. Cancer Cell. 2025; 43(3): 428-445.e6.

[47]

Nong S, Han X, Xiang Y, et al. Metabolic reprogramming in cancer: mechanisms and therapeutics [J]. MedComm (2020). 2023; 4(2):e218.

[48]

Wei Z, Ye Y, Liu C, et al. MIER2/PGC1A elicits sunitinib resistance via lipid metabolism in renal cell carcinoma [J]. J Adv Res. 2025; 70: 287-305.

[49]

Bejarano L, Jordāo MJC, Joyce JA. Therapeutic targeting of the tumor microenvironment [J]. Cancer Discov. 2021; 11(4): 933-959.

[50]

La Rocca A, De Gregorio V, Lagreca E, et al. Colorectal cancer bioengineered microtissues as a model to replicate tumor-ECM crosstalk and assess drug delivery systems in vitro [J]. Int J Mol Sci. 2023; 24(6): 5678.

[51]

Bigos KJ, Quiles CG, Lunj S, et al. Tumour response to hypoxia: understanding the hypoxic tumour microenvironment to improve treatment outcome in solid tumours [J]. Front Oncol. 2024; 14:1331355.

[52]

Zhang J, Vokes N, Li M, et al. Overcoming EGFR-TKI resistance by targeting the tumor microenvironment [J]. Chin Med J Pulm Crit Care Med. 2024; 2(3): 151-161.

[53]

Louault K, Blavier L, Lee MH, et al. Nuclear factor-κB activation by transforming growth factor-β1 drives tumour microenvironment-mediated drug resistance in neuroblastoma [J]. Br J Cancer. 2024; 131(1): 90-100.

[54]

Chan LK, Tsui YM, Ho DW, et al. Cellular heterogeneity and plasticity in liver cancer [J]. Semin Cancer Biol. 2022; 82: 134-149.

[55]

Ogden S, Metic N, Leylek O, et al. Phenotypic heterogeneity and plasticity in colorectal cancer metastasis [J]. Cell Genom. 2025; 5(7):100881.

[56]

Wu HB, Yang S, Weng HY, et al. Autophagy-induced KDR/VEGFR-2 activation promotes the formation of vasculogenic mimicry by glioma stem cells [J]. Autophagy. 2017; 13(9): 1528-1542.

[57]

Wang X, Yang X, Zhang C, et al. Tumor cell-intrinsic PD-1 receptor is a tumor suppressor and mediates resistance to PD-1 blockade therapy [J]. Proc Natl Acad Sci USA. 2020; 117(12): 6640-6650.

[58]

Miao Y, Yang H, Levorse J, et al. Adaptive immune resistance emerges from tumor-initiating stem cells [J]. Cell. 2019; 177(5): 1172-1186.e14.

[59]

Kobayashi K, Tan AC. Unraveling the impact of intratumoral heterogeneity on EGFR tyrosine kinase inhibitor resistance in EGFR-mutated NSCLC [J]. Int J Mol Sci. 2023; 24(4): 4126.

[60]

Hanahan D. Hallmarks of cancer: new dimensions [J]. Cancer Discov. 2022; 12(1): 31-46.

[61]

Mondal P, Natesh J, Penta D, et al. Progress and promises of epigenetic drugs and epigenetic diets in cancer prevention and therapy: a clinical update [J]. Semin Cancer Biol. 2022; 83: 503-522.

[62]

Lu X, Vano YA, Su X, et al. Silencing of genes by promoter hypermethylation shapes tumor microenvironment and resistance to immunotherapy in clear-cell renal cell carcinomas [J]. Cell Rep Med. 2023; 4(11):101287.

[63]

Chan DW, Lam WY, Chen F, et al. Genome-wide DNA methylome analysis identifies methylation signatures associated with survival and drug resistance of ovarian cancers [J]. Clin Epigenetics. 2021; 13(1): 142.

[64]

Kerdivel G, Amrouche F, Calmejane MA, et al. DNA hypermethylation driven by DNMT1 and DNMT3A favors tumor immune escape contributing to the aggressiveness of adrenocortical carcinoma [J]. Clin Epigenetics. 2023; 15(1): 121.

[65]

Liu Y, Sun Y, Yang J, et al. DNMT1-targeting remodeling global DNA hypomethylation for enhanced tumor suppression and circumvented toxicity in oral squamous cell carcinoma [J]. Mol Cancer. 2024; 23(1): 104.

[66]

Mamdani H, Jalal SI. Histone deacetylase inhibition in non-small cell lung cancer: hype or hope? [J]. Front Cell Dev Biol. 2020; 8:582370.

[67]

Li Y, Yang C, Xie L, et al. CYLD induces high oxidative stress and DNA damage through class I HDACs to promote radiosensitivity in nasopharyngeal carcinoma [J]. Cell Death Dis. 2024; 15(1): 95.

[68]

He X, Li Y, Li J, et al. HDAC2-mediated METTL3 delactylation promotes DNA damage repair and chemotherapy resistance in triple-negative breast cancer [J]. Adv Sci (Weinh). 2025; 12(14):e2413121.

[69]

Zhang Q, Shi Y, Liu S, et al. EZH2/G9a interact to mediate drug resistance in non-small-cell lung cancer by regulating the SMAD4/ERK/c-Myc signaling axis [J]. Cell Rep. 2024; 43(2):113714.

[70]

Peschansky VJ, Wahlestedt C. Non-coding RNAs as direct and indirect modulators of epigenetic regulation [J]. Epigenetics. 2014; 9(1): 3-12.

[71]

Cocks A, Del Vecchio F, Martinez-Rodriguez V, et al. Pro-tumoral functions of tumor-associated macrophage EV-miRNA [J]. Semin Cancer Biol. 2022; 86(Pt 1): 58-63.

[72]

Hong L, Han Y, Zhang Y, et al. MicroRNA-21: a therapeutic target for reversing drug resistance in cancer [J]. Expert Opin Ther Targets. 2013; 17(9): 1073-1080.

[73]

Wang Y, Chen G, Dai F, et al. miR-21 induces chemoresistance in ovarian cancer cells via mediating the expression and interaction of CD44v6 and P-gp [J]. Onco Targets Ther. 2021; 14: 325-336.

[74]

Palma GBH, Kaur M. miRNA-128 and miRNA-223 regulate cholesterol-mediated drug resistance in breast cancer [J]. IUBMB Life. 2023; 75(9): 743-764.

[75]

Liu Y, Liu X, Yang S. MicroRNA-221 upregulates the expression of P-gp and Bcl-2 by activating the Stat3 pathway to promote doxorubicin resistance in osteosarcoma cells [J]. Biol Pharm Bull. 2021; 44(6): 861-868.

[76]

Liu K, Gao L, Ma X, et al. Long non-coding RNAs regulate drug resistance in cancer [J]. Mol Cancer. 2020; 19(1): 54.

[77]

Liu Y, Liu H, Zhu C, et al. Tumor small extracellular vesicle-transmitted LncRNA CATED promotes platinum-resistance in high-grade serous ovarian cancer [J]. Adv Sci (Weinh). 2025; 12(31):e05963.

[78]

Gu Z, Zhou Y, Cao C, et al. TFAP2C-mediated LINC00922 signaling underpins doxorubicin-resistant osteosarcoma [J]. Biomed Pharmacother. 2020; 129:110363.

[79]

Fang Z, Chen W, Yuan Z, et al. LncRNA-MALAT1 contributes to the cisplatin-resistance of lung cancer by upregulating MRP1 and MDR1 via STAT3 activation [J]. Biomed Pharmacother. 2018; 101: 536-542.

[80]

Xu R, Du A, Deng X, et al. tsRNA-GlyGCC promotes colorectal cancer progression and 5-FU resistance by regulating SPIB [J]. J Exp Clin Cancer Res. 2024; 43(1): 230.

[81]

Sadoughi F, Hallajzadeh J, Asemi Z, et al. Signaling pathways involved in cell cycle arrest during the DNA breaks [J]. DNA Repair (Amst). 2021; 98:103047.

[82]

Schleicher EM, Moldovan GL. CRISPR screens guide the way for PARP and ATR inhibitor biomarker discovery [J]. Febs j. 2022; 289(24): 7854-7868.

[83]

SCHÄFFER AA, Chung Y, Kammula AV, et al. A systematic analysis of the landscape of synthetic lethality-driven precision oncology [J]. Med. 2024; 5(1): 73-89.e9.

[84]

Padella A, Ghelli Luserna Di Rorà A, Marconi G, et al. Targeting PARP proteins in acute leukemia: dNA damage response inhibition and therapeutic strategies [J]. J Hematol Oncol. 2022; 15(1): 10.

[85]

Wang Y, Bernhardy AJ, Cruz C, et al. The BRCA1-Δ11q alternative splice isoform bypasses germline mutations and promotes therapeutic resistance to PARP inhibition and cisplatin [J]. Cancer Res. 2016; 76(9): 2778-2790.

[86]

Carneiro BA, Collier KA, Nagy RJ, et al. Acquired resistance to poly (ADP-ribose) polymerase inhibitor olaparib in BRCA2-associated prostate cancer resulting from biallelic BRCA2 reversion mutations restores both germline and somatic loss-of-function mutations [J]. JCO Precis Oncol. 2018; 2.

[87]

Lin KK, Harrell MI, Oza AM, et al. BRCA reversion mutations in circulating tumor DNA predict primary and acquired resistance to the PARP inhibitor rucaparib in high-grade ovarian carcinoma [J]. Cancer Discov. 2019; 9(2): 210-219.

[88]

Harvey-Jones E, Raghunandan M, Robbez-Masson L, et al. Longitudinal profiling identifies co-occurring BRCA1/2 reversions, TP53BP1, RIF1 and PAXIP1 mutations in PARP inhibitor-resistant advanced breast cancer [J]. Ann Oncol. 2024; 35(4): 364-380.

[89]

Tobalina L, Armenia J, Irving E, et al. A meta-analysis of reversion mutations in BRCA genes identifies signatures of DNA end-joining repair mechanisms driving therapy resistance [J]. Ann Oncol. 2021; 32(1): 103-112.

[90]

Grelloni C, Garraffo R, Setti A, et al. BRCA1 levels and DNA-damage response are controlled by the competitive binding of circHIPK3 or FMRP to the BRCA1 mRNA [J]. Mol Cell. 2024; 84(21): 4079-4094.e10.

[91]

Varadarajan K, Cruz Pico CX, Evans KW, et al. Efficacy of ATR kinase inhibitor elimusertib monotherapy or combination in tumors with DNA damage response pathway and other genomic alterations [J]. Mol Cancer Ther. 2025; 24(9): 1402-1414.

[92]

Simoneau A, Wu H-J, Bandi M, et al. Abstract 4968: characterization of the clinical development candidate TNG348 as a potent and selective inhibitor of USP1 for the treatment of BRCA1/2mut cancers [J]. Cancer Research. 2023; 83(7_Supplement): 4968.

[93]

Duan Y, Cheng H, Zhuang L, et al. Discovery of Thieno[3,2-d]pyrimidine derivatives as potent and selective inhibitors of ataxia telangiectasia mutated and Rad3 related (ATR) kinase [J]. Eur J Med Chem. 2023; 255:115370.

[94]

Awwad SW, Doyle C, Coulthard J, et al. KLF5 loss sensitizes cells to ATR inhibition and is synthetic lethal with ARID1A deficiency [J]. Nat Commun. 2025; 16(1): 480.

[95]

Cote GM, Kochupurakkal BS, Do K, et al. A translational study of the ATR inhibitor berzosertib as monotherapy in four molecularly defined cohorts of advanced solid tumors [J]. Clin Cancer Res. 2025; 31(1): 35-44.

[96]

Li M, Tsavachidis S, Wang F, et al. Low-molecular-weight cyclin E deregulates DNA replication and damage repair to promote genomic instability in breast cancer [J]. Oncogene. 2022; 41(50): 5331-5346.

[97]

ELBÆK CR, Petrosius V, Benada J, et al. WEE1 kinase protects the stability of stalled DNA replication forks by limiting CDK2 activity [J]. Cell Rep. 2022; 38(3):110261.

[98]

Heinst L, Lee KS, Berthold R, et al. Exploiting WEE1 kinase activity as FUS::DDIT3-dependent therapeutic vulnerability in myxoid liposarcoma [J]. Clin Cancer Res. 2024; 30(21): 4974-4986.

[99]

Wang C, Lu X. WEE-family kinases in cancer: synthetic lethal interactions and drug discovery [J]. Trends Pharmacol Sci. 2025.

[100]

Do KT, Kochupurakkal B, Kelland S, et al. Phase 1 combination study of the CHK1 inhibitor prexasertib and the PARP inhibitor olaparib in high-grade serous ovarian cancer and other solid tumors [J]. Clin Cancer Res. 2021; 27(17): 4710-4716.

[101]

Guo Y, Wang J, Benedict B, et al. Targeting CDC7 potentiates ATR-CHK1 signaling inhibition through induction of DNA replication stress in liver cancer [J]. Genome Med. 2021; 13(1): 166.

[102]

Lu X, Wang S, Hua X, et al. Targeting the cGAS-STING pathway inhibits peripheral T-cell lymphoma progression and enhances the chemotherapeutic efficacy [J]. Adv Sci (Weinh). 2024; 11(10):e2306092.

[103]

Nihira NT, Wu W, Hosoi M, et al. Nuclear PD-L1 triggers tumour-associated inflammation upon DNA damage [J]. EMBO Rep. 2025; 26(3): 635-655.

[104]

Bright SJ, Manandhar M, Flint DB, et al. ATR inhibition radiosensitizes cells through augmented DNA damage and G2 cell cycle arrest abrogation [J]. JCI Insight. 2024; 9(19):e179599.

[105]

Ng II, Zhang Z, Xiao K, et al. Targeting WEE1 in tumor-associated dendritic cells potentiates antitumor immunity via the cGAS/STING pathway [J]. Cell Rep. 2025; 44(6):115733.

[106]

Bajrami I, Walker C, Krastev DB, et al. Sirtuin inhibition is synthetic lethal with BRCA1 or BRCA2 deficiency [J]. Commun Biol. 2021; 4(1): 1270.

[107]

Li H, Furusawa T, Cavero R, et al. Metabolic dependency mapping identifies Peroxiredoxin 1 as a driver of resistance to ATM inhibition [J]. Redox Biol. 2025; 80:103503.

[108]

Lee Y, Vousden KH, Hennequart M. Cycling back to folate metabolism in cancer [J]. Nat Cancer. 2024; 5(5): 701-715.

[109]

Li H, Zimmerman SE, Weyemi U. Genomic instability and metabolism in cancer [J]. Int Rev Cell Mol Biol. 2021; 364: 241-265.

[110]

Lee WD, Pirona AC, Sarvin B, et al. Tumor reliance on cytosolic versus mitochondrial one-carbon flux depends on folate availability [J]. Cell Metab. 2021; 33(1): 190-198.e6.

[111]

Otto T, Sicinski P. Cell cycle proteins as promising targets in cancer therapy [J]. Nat Rev Cancer. 2017; 17(2): 93-115.

[112]

Wang H, Guo M, Wei H, et al. Targeting p53 pathways: mechanisms, structures, and advances in therapy [J]. Signal Transduct Target Ther. 2023; 8(1): 92.

[113]

Toledo L, Neelsen KJ, Lukas J. Replication catastrophe: when a checkpoint fails because of exhaustion [J]. Mol Cell. 2017; 66(6): 735-749.

[114]

Liu TT, Wang Q, Zhou Y, et al. Discovery of a meisoindigo-derived PROTAC as the ATM degrader: revolutionizing colorectal cancer therapy via synthetic lethality with ATR inhibitors [J]. J Med Chem. 2024; 67(9): 7620-7634.

[115]

Ma B, Sang Y, Du X, et al. Targeting CDK2 confers vulnerability to lenvatinib via driving senescence in anaplastic thyroid cancer [J]. Adv Sci (Weinh). 2025; 12(7):e2413514.

[116]

Zhong A, Cheng CS, Lu RQ, et al. Suppression of NBS1 upregulates CyclinB to induce olaparib sensitivity in ovarian cancer [J]. Technol Cancer Res Treat. 2024; 23:15330338231212085.

[117]

Zhang B, Tang C, Yao Y, et al. The tumor therapy landscape of synthetic lethality [J]. Nat Commun. 2021; 12(1): 1275.

[118]

Jiang F, Doudna JA. CRISPR-Cas9 structures and mechanisms [J]. Annu Rev Biophys. 2017; 46: 505-529.

[119]

Jasin M, Haber JE. The democratization of gene editing: insights from site-specific cleavage and double-strand break repair [J]. DNA Repair (Amst). 2016; 44: 6-16.

[120]

Karapurkar JK, Colaco JC, Suresh B, et al. USP28 promotes tumorigenesis and cisplatin resistance by deubiquitinating MAST1 protein in cancer cells [J]. Cell Mol Life Sci. 2024; 81(1): 145.

[121]

Lin P, Lourenco C, Cruickshank J, et al. Topoisomerase 1 inhibition in MYC-driven cancer promotes aberrant R-loop accumulation to induce synthetic lethality [J]. Cancer Res. 2023; 83(24): 4015-4029.

[122]

Turner N, Grose R. Fibroblast growth factor signalling: from development to cancer [J]. Nat Rev Cancer. 2010; 10(2): 116-129.

[123]

Babina IS, Turner NC. Advances and challenges in targeting FGFR signalling in cancer [J]. Nat Rev Cancer. 2017; 17(5): 318-332.

[124]

Montazeri K, Bellmunt J. Erdafitinib for the treatment of metastatic bladder cancer [J]. Expert Rev Clin Pharmacol. 2020; 13(1): 1-6.

[125]

Abou-Alfa GK, Sahai V, Hollebecque A, et al. Pemigatinib for previously treated, locally advanced or metastatic cholangiocarcinoma: a multicentre, open-label, phase 2 study [J]. Lancet Oncol. 2020; 21(5): 671-684.

[126]

Jin H, Shi Y, Lv Y, et al. EGFR activation limits the response of liver cancer to lenvatinib [J]. Nature. 2021; 595(7869): 730-734.

[127]

Yang Z, Liang SQ, Yang H, et al. CRISPR-mediated kinome editing prioritizes a synergistic combination therapy for FGFR1-amplified lung cancer [J]. Cancer Res. 2021; 81(11): 3121-3133.

[128]

Yu Y, Gao X, Zhao H, et al. A genome-wide synthetic lethal screen identifies spermidine synthase as a target to enhance erdafitinib efficacy in FGFR-mutant bladder cancer [J]. Cancer Res. 2025; 85(12): 2288-2301.

[129]

Li XG, Zhu GS, Cao PJ, et al. Genome-wide CRISPR-Cas9 screening identifies ITGA8 responsible for abivertinib sensitivity in lung adenocarcinoma [J]. Acta Pharmacol Sin. 2025; 46(5): 1419-1432.

[130]

Lipert BA, Siemens KN, Khan A, et al. CRISPR screens with trastuzumab emtansine in HER2-positive breast cancer cell lines reveal new insights into drug resistance [J]. Breast Cancer Res. 2025; 27(1): 48.

[131]

Zerbib J, Ippolito MR, Eliezer Y, et al. Human aneuploid cells depend on the RAF/MEK/ERK pathway for overcoming increased DNA damage [J]. Nat Commun. 2024; 15(1): 7772.

[132]

Adams DJ, Barlas B, Mcintyre RE, et al. Genetic determinants of micronucleus formation in vivo [J]. Nature. 2024; 627(8002): 130-136.

[133]

Pettitt SJ, Krastev DB, Brandsma I, et al. Genome-wide and high-density CRISPR-Cas9 screens identify point mutations in PARP1 causing PARP inhibitor resistance [J]. Nat Commun. 2018; 9(1): 1849.

[134]

Tsujino T, Takai T, Hinohara K, et al. CRISPR screens reveal genetic determinants of PARP inhibitor sensitivity and resistance in prostate cancer [J]. Nat Commun. 2023; 14(1): 252.

[135]

Ipsen MB, SØRENSEN EMG, Thomsen EA, et al. A genome-wide CRISPR-Cas9 knockout screen identifies novel PARP inhibitor resistance genes in prostate cancer [J]. Oncogene. 2022; 41(37): 4271-4281.

[136]

Van De Kooij B, Van Der Wal FJ, Rother MB, et al. The Fanconi anemia core complex promotes CtIP-dependent end resection to drive HR at DNA double-strand breaks [J]. Nat Commun. 2024; 15(1): 7076.

[137]

Bolck HA, Przetocka S, Meier R, et al. RNAi screening uncovers a synthetic sick interaction between CtIP and the BARD1 tumor suppressor [J]. Cells. 2022; 11(4): 643.

[138]

Hu Z, Viswanathan R, Cheng H, et al. Inhibiting WEE1 and IKK-RELA crosstalk overcomes TNFα resistance in head and neck cancers [J]. Mol Cancer Res. 2022; 20(6): 867-882.

[139]

Martires LCM, Ahronian LG, Pratt CB, et al. LIG1 is a synthetic lethal target in BRCA1 mutant cancers [J]. Mol Cancer Ther. 2025; 24(4): 618-627.

[140]

Aldridge S, Teichmann SA. Single cell transcriptomics comes of age [J]. Nat Commun. 2020; 11(1): 4307.

[141]

Li X, Wang CY. From bulk, single-cell to spatial RNA sequencing [J]. Int J Oral Sci. 2021; 13(1): 36.

[142]

Wen L, Li G, Huang T, et al. Single-cell technologies: from research to application [J]. Innovation (Camb). 2022; 3(6):100342.

[143]

Luo L, Yang P, Mastoraki S, et al. Single-cell RNA sequencing identifies molecular biomarkers predicting late progression to CDK4/6 inhibition in patients with HR+/HER2- metastatic breast cancer [J]. Mol Cancer. 2025; 24(1): 48.

[144]

Li F, Zhang H, Huang Y, et al. Single-cell transcriptome analysis reveals the association between histone lactylation and cisplatin resistance in bladder cancer [J]. Drug Resist Updat. 2024; 73:101059.

[145]

Wu T, Zhang X, Liu X, et al. Single-cell sequencing reveals the immune microenvironment landscape related to anti-PD-1 resistance in metastatic colorectal cancer with high microsatellite instability [J]. BMC Med. 2023; 21(1): 161.

[146]

Cohen YC, Zada M, Wang SY, et al. Identification of resistance pathways and therapeutic targets in relapsed multiple myeloma patients through single-cell sequencing [J]. Nat Med. 2021; 27(3): 491-503.

[147]

Peng H, Jiang L, Yuan J, et al. Single-cell characterization of differentiation trajectories and drug resistance features in gastric cancer with peritoneal metastasis [J]. Clin Transl Med. 2024; 14(10):e70054.

[148]

Wu H, Guo C, Wang C, et al. Single-cell RNA sequencing reveals tumor heterogeneity, microenvironment, and drug-resistance mechanisms of recurrent glioblastoma [J]. Cancer Sci. 2023; 114(6): 2609-2621.

[149]

Peng X, Huang X, Zhang S, et al. Sequential inhibition of PARP and BET as a rational therapeutic strategy for glioblastoma [J]. Adv Sci (Weinh). 2024; 11(30):e2307747.

[150]

Zhu TC, He ZP, Li ST, et al. TAOK1 promotes filament formation in HR repair through phosphorylating USP7 [J]. Proc Natl Acad Sci U S A. 2025; 122(12):e2422262122.

[151]

Nguyen TT, Torrini C, Shang E, et al. OGDH and Bcl-xL loss causes synthetic lethality in glioblastoma [J]. JCI Insight. 2024; 9(8):e172565.

[152]

Dou Y, Ren Y, Zhao X, et al. CSSLdb: discovery of cancer-specific synthetic lethal interactions based on machine learning and statistic inference [J]. Comput Biol Med. 2024; 170:108066.

[153]

De Kegel B, Quinn N, Thompson NA, et al. Comprehensive prediction of robust synthetic lethality between paralog pairs in cancer cell lines [J]. Cell Syst. 2021; 12(12): 1144-1159.e6.

[154]

Hao Z, Wu D, Fang Y, et al. Prediction of synthetic lethal interactions in human cancers using multi-view graph auto-encoder [J]. IEEE J Biomed Health Inform. 2021; 25(10): 4041-4051.

[155]

Fan K, Gökbağ B, Tang S, et al. Synthetic lethal connectivity and graph transformer improve synthetic lethality prediction [J]. Brief Bioinform. 2024; 25(5):bbae425.

[156]

Feng Y, Long Y, Wang H, et al. Benchmarking machine learning methods for synthetic lethality prediction in cancer [J]. Nat Commun. 2024; 15(1): 9058.

[157]

Thng DKH, Toh TB, Chow EK. Capitalizing on synthetic lethality of MYC to treat cancer in the digital age [J]. Trends Pharmacol Sci. 2021; 42(3): 166-182.

[158]

Bhamidipati D, Haro-Silerio JI, Yap TA, et al. PARP inhibitors: enhancing efficacy through rational combinations [J]. Br J Cancer. 2023; 129(6): 904-916.

[159]

Ray Chaudhuri A, Nussenzweig A. The multifaceted roles of PARP1 in DNA repair and chromatin remodelling [J]. Nat Rev Mol Cell Biol. 2017; 18(10): 610-621.

[160]

Prakash R, Zhang Y, Feng W, et al. HR and human health: the roles of BRCA1, BRCA2, and associated proteins [J]. Cold Spring Harb Perspect Biol. 2015; 7(4):a016600.

[161]

Bryant HE, Schultz N, Thomas HD, et al. Specific killing of BRCA2-deficient tumours with inhibitors of poly(ADP-ribose) polymerase [J]. Nature. 2005; 434(7035): 913-917.

[162]

Farmer H, Mccabe N, Lord CJ, et al. Targeting the DNA repair defect in BRCA mutant cells as a therapeutic strategy [J]. Nature. 2005; 434(7035): 917-921.

[163]

Maiorano MFP, Maiorano BA, Biancofiore A, et al. Niraparib and advanced ovarian cancer: a beacon in the Non-BRCA mutated setting [J]. Pharmaceuticals (Basel). 2023; 16(9): 1261.

[164]

Xiong Y, Guo Y, Liu Y, et al. Pamiparib is a potent and selective PARP inhibitor with unique potential for the treatment of brain tumor [J]. Neoplasia. 2020; 22(9): 431-440.

[165]

Wu X, Zhu J, Wang J, et al. Pamiparib monotherapy for patients with germline BRCA1/2-mutated ovarian cancer previously treated with at least two lines of chemotherapy: a multicenter, open-label, Phase II Study [J]. Clin Cancer Res. 2022; 28(4): 653-661.

[166]

Fong PC, Boss DS, Yap TA, et al. Inhibition of poly(ADP-ribose) polymerase in tumors from BRCA mutation carriers [J]. N Engl J Med. 2009; 361(2): 123-134.

[167]

Moore K, Colombo N, Scambia G, et al. Maintenance olaparib in patients with newly diagnosed advanced ovarian cancer [J]. N Engl J Med. 2018; 379(26): 2495-2505.

[168]

Sidaway P. Olaparib maintenance moves to first line [J]. Nat Rev Clin Oncol. 2018; 15(12): 725.

[169]

Information on delivery of drug approval documents [Z]. 2024. December 27.

[170]

(NMPA) N M P A. Information on delivery of drug approval documents [Z]. 2024. November 5.

[171]

Coleman RL, Oza AM, Lorusso D, et al. Rucaparib maintenance treatment for recurrent ovarian carcinoma after response to platinum therapy (ARIEL3): a randomised, double-blind, placebo-controlled, phase 3 trial [J]. Lancet. 2017; 390(10106): 1949-1961.

[172]

Oza AM, Lisyanskaya A, Fedenko A, et al. Rucaparib versus chemotherapy for treatment of relapsed ovarian cancer with deleterious BRCA1 or BRCA2 mutation (ARIEL4): final results of an international, open-label, randomised, phase 3 trial [J]. Lancet Oncol. 2025; 26(2): 249-264.

[173]

Malhan D, Hesse J, Nelson N, et al. Circadian rhythm disruption by PARP inhibitors correlates with treatment toxicity in patients with ovarian cancer and is a predictor of side effects [J]. EBioMedicine. 2025; 117:105764.

[174]

Lee M, Je IG, Kim JE, et al. Venadaparib is a novel and selective PARP inhibitor with improved physicochemical properties, efficacy, and safety [J]. Mol Cancer Ther. 2023; 22(3): 333-342.

[175]

Mirza MR, Monk BJ, Herrstedt J, et al. Niraparib maintenance therapy in platinum-sensitive, recurrent ovarian cancer [J]. N Engl J Med. 2016; 375(22): 2154-2164.

[176]

Wu XH, Zhu JQ, Yin RT, et al. Niraparib maintenance therapy in patients with platinum-sensitive recurrent ovarian cancer using an individualized starting dose (NORA): a randomized, double-blind, placebo-controlled phase III trial(☆) [J]. Ann Oncol. 2021; 32(4): 512-521.

[177]

Pujade-Lauraine E, Ledermann JA, Selle F, et al. Olaparib tablets as maintenance therapy in patients with platinum-sensitive, relapsed ovarian cancer and a BRCA1/2 mutation (SOLO2/ENGOT-Ov21): a double-blind, randomised, placebo-controlled, phase 3 trial [J]. Lancet Oncol. 2017; 18(9): 1274-1284.

[178]

Li N, Bu H, Liu J, et al. An open-label, multicenter, single-arm, phase II study of fluzoparib in patients with germline BRCA1/2 mutation and platinum-sensitive recurrent ovarian cancer [J]. Clin Cancer Res. 2021; 27(9): 2452-2458.

[179]

Wu X, Liu J, Wang J, et al. Senaparib as first-line maintenance therapy in advanced ovarian cancer: a randomized phase 3 trial [J]. Nat Med. 2024; 30(6): 1612-1621.

[180]

PILIÉ PG, Tang C, Mills GB, et al. State-of-the-art strategies for targeting the DNA damage response in cancer [J]. Nat Rev Clin Oncol. 2019; 16(2): 81-104.

[181]

Zatreanu D, Robinson HMR, Alkhatib O, et al. Polθ inhibitors elicit BRCA-gene synthetic lethality and target PARP inhibitor resistance [J]. Nat Commun. 2021; 12(1): 3636.

[182]

Zhou J, Gelot C, Pantelidou C, et al. A first-in-class polymerase theta inhibitor selectively targets homologous-recombination-deficient tumors [J]. Nat Cancer. 2021; 2(6): 598-610.

[183]

Croteau DL, Popuri V, Opresko PL, et al. Human RecQ helicases in DNA repair, recombination, and replication [J]. Annu Rev Biochem. 2014; 83: 519-552.

[184]

Chan EM, Shibue T, Mcfarland JM, et al. WRN helicase is a synthetic lethal target in microsatellite unstable cancers [J]. Nature. 2019; 568(7753): 551-556.

[185]

Picco G, Cattaneo CM, Van Vliet EJ, et al. Werner helicase is a synthetic-lethal vulnerability in mismatch repair-deficient colorectal cancer refractory to targeted therapies, chemotherapy, and immunotherapy [J]. Cancer Discov. 2021; 11(8): 1923-1937.

[186]

Ferretti S, Hamon J, De Kanter R, et al. Discovery of WRN inhibitor HRO761 with synthetic lethality in MSI cancers [J]. Nature. 2024; 629(8011): 443-449.

[187]

Rodríguez Pérez F, Natwick D, Schiff L, et al. WRN inhibition leads to its chromatin-associated degradation via the PIAS4-RNF4-p97/VCP axis [J]. Nat Commun. 2024; 15(1): 6059.

[188]

Baltgalvis KA, Lamb KN, Symons KT, et al. Chemoproteomic discovery of a covalent allosteric inhibitor of WRN helicase [J]. Nature. 2024; 629(8011): 435-442.

[189]

MCATEE R. AACR Chicago 2025: New Drugs on the Horizon [Z]. May 1, 2025.

[190]

Huang A, Garraway LA, Ashworth A, et al. Synthetic lethality as an engine for cancer drug target discovery [J]. Nat Rev Drug Discov. 2020; 19(1): 23-38.

[191]

Marjon K, Cameron MJ, Quang P, et al. MTAP deletions in cancer create vulnerability to targeting of the MAT2A/PRMT5/RIOK1 axis [J]. Cell Rep. 2016; 15(3): 574-587.

[192]

Cottrell KM, Briggs KJ, Whittington DA, et al. Discovery of TNG908: a selective, brain penetrant, MTA-Cooperative PRMT5 inhibitor that is synthetically lethal with MTAP-deleted cancers [J]. J Med Chem. 2024; 67(8): 6064-6080.

[193]

Cottrell KM, Briggs KJ, Tsai A, et al. Discovery of TNG462: a highly potent and selective MTA-Cooperative PRMT5 inhibitor to target cancers with MTAP deletion [J]. J Med Chem. 2025; 68(5): 5097-5119.

[194]

Engstrom LD, Aranda R, Waters L, et al. MRTX1719 is an MTA-Cooperative PRMT5 inhibitor that exhibits synthetic lethality in preclinical models and patients with MTAP-deleted cancer [J]. Cancer Discov. 2023; 13(11): 2412-2431.

[195]

Belmontes B, Slemmons KK, Su C, et al. AMG 193, a clinical stage MTA-cooperative PRMT5 inhibitor, drives antitumor activity preclinically and in patients with MTAP-deleted cancers [J]. Cancer Discov. 2025; 15(1): 139-161.

[196]

Rodon J, Prenen H, Sacher A, et al. First-in-human study of AMG 193, an MTA-cooperative PRMT5 inhibitor, in patients with MTAP-deleted solid tumors: results from phase I dose exploration [J]. Ann Oncol. 2024; 35(12): 1138-1147.

[197]

Nespolo A, Stefenatti L, Pellarin I, et al. USP1 deubiquitinates PARP1 to regulate its trapping and PARylation activity [J]. Sci Adv. 2024; 10(46):eadp6567.

[198]

Lim KS, Li H, Roberts EA, et al. USP1 is required for replication fork protection in BRCA1-deficient tumors [J]. Mol Cell. 2018; 72(6): 925-941.e4.

[199]

Zhang S, Lu R, Zhou H, et al. Surface acoustic wave devices using lithium niobate on silicon carbide [J]. IEEE Transactions on Microwave Theory and Techniques. 2020; 68(9): 3653-3666.

[200]

Simoneau A, Pratt CB, Wu HJ, et al. Characterization of TNG348: a selective, allosteric USP1 inhibitor that synergizes with PARP inhibitors in tumors with HR deficiency [J]. Mol Cancer Ther. 2025; 24(5): 678-691.

[201]

Cadzow L, Brenneman J, Tobin E, et al. The USP1 inhibitor KSQ-4279 overcomes PARP inhibitor resistance in HR-Deficient Tumors [J]. Cancer Res. 2024; 84(20): 3419-3434.

[202]

Blackford AN, Jackson SP. ATM, ATR, and DNA-PK: the trinity at the heart of the DNA damage response [J]. Mol Cell. 2017; 66(6): 801-817.

[203]

Khamidullina AI, Abramenko YE, Bruter AV, et al. Key proteins of replication stress response and cell cycle control as cancer therapy targets [J]. Int J Mol Sci. 2024; 25(2): 1263.

[204]

Yap TA, Tan DSP, Stathis A, et al. Phase Ib basket expansion trial and alternative-schedule dose-escalation study of ATR inhibitor elimusertib in advanced solid tumors with DNA damage response defects [J]. Cancer Discov. 2025; 15(10): 2019-2035.

[205]

Groelly FJ, Fawkes M, Dagg RA, et al. Targeting DNA damage response pathways in cancer [J]. Nat Rev Cancer. 2023; 23(2): 78-94.

[206]

Kim ST, Smith SA, Mortimer P, et al. Phase I study of ceralasertib (AZD6738), a novel DNA damage repair agent, in combination with weekly paclitaxel in refractory cancer [J]. Clin Cancer Res. 2021; 27(17): 4700-4709.

[207]

Lin AB, Mcneely SC, Beckmann RP. Achieving precision death with cell-cycle inhibitors that target DNA replication and repair [J]. Clin Cancer Res. 2017; 23(13): 3232-3240.

[208]

Lee JM, Nair J, Zimmer A, et al. Prexasertib, a cell cycle checkpoint kinase 1 and 2 inhibitor, in BRCA wild-type recurrent high-grade serous ovarian cancer: a first-in-class proof-of-concept phase 2 study [J]. Lancet Oncol. 2018; 19(2): 207-215.

[209]

Italiano A, Infante JR, Shapiro GI, et al. Phase I study of the checkpoint kinase 1 inhibitor GDC-0575 in combination with gemcitabine in patients with refractory solid tumors [J]. Ann Oncol. 2018; 29(5): 1304-1311.

[210]

Han JH-J, Kim K-T, Im J, et al. Abstract 1461: pHI-101, a potent and novel inhibitor of CHK2 in ovarian and breast cancer cells [J]. Cancer Research. 2021; 81(13_Supplement): 1461.

[211]

Dagogo-Jack I, Schrock AB, Kem M, et al. Clinicopathologic characteristics of BRG1-Deficient NSCLC [J]. J Thorac Oncol. 2020; 15(5): 766-776.

[212]

Fernando TM, Piskol R, Bainer R, et al. Functional characterization of SMARCA4 variants identified by targeted exome-sequencing of 131,668 cancer patients [J]. Nat Commun. 2020; 11(1): 5551.

[213]

Hulse M, Wang M, Xu C, et al. PRT3789 is a first-in-human SMARCA2-selective degrader that induces synthetic lethality in SMARCA4-mutated cancers [J]. Cancer Res. 2025.

[214]

Cantley J, Ye X, Rousseau E, et al. Selective PROTAC-mediated degradation of SMARCA2 is efficacious in SMARCA4 mutant cancers [J]. Nat Commun. 2022; 13(1): 6814.

[215]

Murphy T, Mason JM, Leber B, et al. Preclinical characterization and clinical trial of CFI-400945, a polo-like kinase 4 inhibitor, in patients with relapsed/refractory acute myeloid leukemia and higher-risk myelodysplastic neoplasms [J]. Leukemia. 2024; 38(3): 502-512.

[216]

Grundy MK, Buckanovich RJ, Bernstein KA. Regulation and pharmacological targeting of RAD51 in cancer [J]. NAR Cancer. 2020; 2(3):zcaa024.

[217]

Bagnolini G, Milano D, Manerba M, et al. Synthetic lethality in pancreatic cancer: discovery of a new RAD51-BRCA2 small molecule disruptor that inhibits HR and synergizes with olaparib [J]. J Med Chem. 2020; 63(5): 2588-2619.

[218]

Li L, Xie K, Xie H, et al. AURKB promotes colorectal cancer progression by triggering the phosphorylation of histone H3 at serine 10 to activate CCNE1 expression [J]. Aging (Albany NY). 2024; 16(9): 8019-8030.

[219]

Xu H, George E, Gallo D, et al. Targeting CCNE1 amplified ovarian and endometrial cancers by combined inhibition of PKMYT1 and ATR [J]. Nat Commun. 2025; 16(1): 3112.

[220]

Gallo D, Young JTF, Fourtounis J, et al. CCNE1 amplification is synthetic lethal with PKMYT1 kinase inhibition [J]. Nature. 2022; 604(7907): 749-756.

[221]

Wang C, Fang Y, Zhou Z, et al. Structure-based drug design of 2-Amino-[1,1'-biphenyl]-3-carboxamide derivatives as selective PKMYT1 inhibitors for the treatment of CCNE1-amplified breast cancer [J]. J Med Chem. 2024; 67(17): 15816-15836.

[222]

Zhang H, Yu J, Yuan S, et al. Discovery of potent and selective PKMYT1 inhibitors for the treatment of CCNE1-amplified cancer [J]. Eur J Med Chem. 2025; 299:118059.

[223]

Wang C, Wang Y, Meng F, et al. Discovery of pyrrolopyrimidinone derivatives as potent PKMYT1 inhibitors for the treatment of cancer [J]. Eur J Med Chem. 2025; 281:117025.

[224]

Zhou F, Yang G, Liu Y, et al. Abstract 7278: discovery of a novel WRN inhibitor, ZM-3329 that efficiently inhibits MSI-H tumor growth [J]. Cancer Research. 2024; 84(6_Supplement): 7278.

[225]

Tubbs A, Golji J, Mcgowan M, et al. Abstract 4205: direct measurement of TA repeat expansions significantly outperforms MSI-H status as a predictor of sensitivity to the novel WRN inhibitor MOMA-341 [J]. Cancer Research. 2025; 85(8_Supplement_1): 4205.

[226]

Kofink C, Trainor N, Mair B, et al. A selective and orally bioavailable VHL-recruiting PROTAC achieves SMARCA2 degradation in vivo [J]. Nat Commun. 2022; 13(1): 5969.

[227]

Yang L, Tu W, Huang L, et al. Discovery of SMD-3040 as a potent and selective SMARCA2 PROTAC degrader with strong in vivo antitumor activity [J]. J Med Chem. 2023; 66(15): 10761-10781.

[228]

Shkundina IS, Gall AA, Dick A, et al. New RAD51 inhibitors to target HR in human cells [J]. Genes (Basel). 2021; 12(6): 920.

[229]

Gu P, Xue L, Zhao C, et al. Targeting the HR pathway in cancer with a novel class of RAD51 inhibitors [J]. Front Oncol. 2022; 12:885186.

[230]

Greenhough LA, Liang CC, Belan O, et al. Structure and function of the RAD51B-RAD51C-RAD51D-XRCC2 tumour suppressor [J]. Nature. 2023; 619(7970): 650-657.

[231]

Thrasher JG, Fagunloye AAG, Justiniano FS, et al. RAD51 Paralogs and RAD51 Paralog Complexes BCDX2 and CX3 Interact with BRCA2 [J]. bioRxiv, 2024.

[232]

Costantino L, Sotiriou SK, Rantala JK, et al. Break-induced replication repair of damaged forks induces genomic duplications in human cells [J]. Science. 2014; 343(6166): 88-91.

[233]

Malacaria E, Pugliese GM, Honda M, et al. Rad52 prevents excessive replication fork reversal and protects from nascent strand degradation [J]. Nat Commun. 2019; 10(1): 1412.

[234]

Minocherhomji S, Ying S, Bjerregaard VA, et al. Replication stress activates DNA repair synthesis in mitosis [J]. Nature. 2015; 528(7581): 286-290.

[235]

Bhowmick R, Minocherhomji S, Hickson ID. RAD52 facilitates mitotic DNA synthesis following replication stress [J]. Mol Cell. 2016; 64(6): 1117-1126.

[236]

Lourenco C, Resetca D, Redel C, et al. MYC protein interactors in gene transcription and cancer [J]. Nat Rev Cancer. 2021; 21(9): 579-591.

[237]

Murai J, Feng Y, Yu GK, et al. Resistance to PARP inhibitors by SLFN11 inactivation can be overcome by ATR inhibition [J]. Oncotarget. 2016; 7(47): 76534-76550.

[238]

Molenaar RJ, Radivoyevitch T, Nagata Y, et al. IDH1/2 mutations sensitize acute myeloid leukemia to PARP inhibition and this is reversed by IDH1/2-mutant inhibitors [J]. Clin Cancer Res. 2018; 24(7): 1705-1715.

[239]

Sulkowski PL, Corso CD, Robinson ND, et al. 2-Hydroxyglutarate produced by neomorphic IDH mutations suppresses HR and induces PARP inhibitor sensitivity [J]. Sci Transl Med. 2017; 9(375):eaal2463.

[240]

Castroviejo-Bermejo M, Cruz C, Llop-Guevara A, et al. A RAD51 assay feasible in routine tumor samples calls PARP inhibitor response beyond BRCA mutation [J]. EMBO Mol Med. 2018; 10(12):e9172.

[241]

Hill SJ, Decker B, Roberts EA, et al. Prediction of DNA repair inhibitor response in short-term patient-derived ovarian cancer organoids [J]. Cancer Discov. 2018; 8(11): 1404-1421.

[242]

Cong K, Peng M, Kousholt AN, et al. Replication gaps are a key determinant of PARP inhibitor synthetic lethality with BRCA deficiency [J]. Mol Cell. 2021; 81(15): 3128-3144.e7.

[243]

Demin AA, Hirota K, Tsuda M, et al. XRCC1 prevents toxic PARP1 trapping during DNA base excision repair [J]. Mol Cell. 2021; 81(14): 3018-3030.e5.

[244]

Prindle V, Richardson AE, Sher KR, et al. Synthetic lethality of mRNA quality control complexes in cancer [J]. Nature. 2025; 638(8052): 1095-1103.

[245]

Chan PY, Alexander D, Mehta I, et al. The synthetic lethal interaction between CDS1 and CDS2 is a vulnerability in uveal melanoma and across multiple tumor types [J]. Nat Genet. 2025; 57(7): 1672-1683.

[246]

Zhong K, Luo W, Li N, et al. CDK12 regulates angiogenesis of advanced prostate cancer by IGFBP3 [J]. Int J Oncol. 2024; 64(2).

[247]

Yeow ZY, Lambrus BG, Marlow R, et al. Targeting TRIM37-driven centrosome dysfunction in 17q23-amplified breast cancer [J]. Nature. 2020; 585(7825): 447-452.

[248]

Li S, Xu Z, Sheng J. tRNA-derived small RNA: a novel regulatory small non-coding RNA [J]. Genes (Basel). 2018; 9(5): 246.

[249]

Fu BF, Xu CY. Transfer RNA-derived small RNAs: novel regulators and biomarkers of cancers [J]. Front Oncol. 2022; 12:843598.

[250]

Cui Y, Huang Y, Wu X, et al. Hypoxia-induced tRNA-derived fragments, novel regulatory factor for doxorubicin resistance in triple-negative breast cancer [J]. J Cell Physiol. 2019; 234(6): 8740-8751.

[251]

Sun C, Yang F, Zhang Y, et al. tRNA-derived fragments as novel predictive biomarkers for trastuzumab-resistant breast cancer [J]. Cell Physiol Biochem. 2018; 49(2): 419-431.

[252]

He Y, Liu Y, Gong J, et al. tRF-27 competitively binds to G3BPs and activates MTORC1 to enhance HER2 positive breast cancer trastuzumab tolerance [J]. Int J Biol Sci. 2024; 20(10): 3923-3941.

[253]

Xu C, Liang T, Zhang F, et al. tRNA-derived fragments as novel potential biomarkers for relapsed/refractory multiple myeloma [J]. BMC Bioinformatics. 2021; 22(1): 238.

[254]

Sun C, Huang X, Li J, et al. Exosome-transmitted tRF-16-K8J7K1B promotes tamoxifen resistance by reducing drug-induced cell apoptosis in breast cancer [J]. Cancers (Basel). 2023; 15(3): 899.

[255]

Wu F, Chai B, Qi P, et al. Oncogenic tRNA-derived fragment tRF-Leu-CAG promotes tumorigenesis of lung cancer via targeting TCEA3 and increasing autophagy [J]. J Gene Med. 2024; 26(9):e3737.

[256]

Kryukov GV, Wilson FH, Ruth JR, et al. MTAP deletion confers enhanced dependency on the PRMT5 arginine methyltransferase in cancer cells [J]. Science. 2016; 351(6278): 1214-1218.

[257]

Zhang X, Wang Z, He Y, et al. ARID1A loss enhances sensitivity to c-MET inhibition by dual targeting of GPX4 and iron homeostasis, inducing ferroptosis [J]. Cell Death Differ. 2025; 32(11): 2009-2021.

[258]

Liu Y, Yang EJ, Shi C, et al. Histone acetyltransferase (HAT) P300/CBP inhibitors induce synthetic lethality in PTEN-deficient colorectal cancer cells through destabilizing AKT [J]. Int J Biol Sci. 2020; 16(11): 1774-1784.

[259]

Lopez JS, Banerji U. Combine and conquer: challenges for targeted therapy combinations in early phase trials [J]. Nat Rev Clin Oncol. 2017; 14(1): 57-66.

[260]

Kopetz S, Grothey A, Yaeger R, et al. Encorafenib, binimetinib, and cetuximab in BRAF V600E-mutated colorectal cancer [J]. N Engl J Med. 2019; 381(17): 1632-1643.

[261]

Yazinski SA, Comaills V, Buisson R, et al. ATR inhibition disrupts rewired HR and fork protection pathways in PARP inhibitor-resistant BRCA-deficient cancer cells [J]. Genes Dev. 2017; 31(3): 318-332.

[262]

Serra V, Wang AT, Castroviejo-Bermejo M, et al. Identification of a molecularly-defined subset of breast and ovarian cancer models that respond to WEE1 or ATR inhibition, overcoming PARP inhibitor resistance [J]. Clin Cancer Res. 2022; 28(20): 4536-4550.

[263]

Taglialatela A, Leuzzi G, Sannino V, et al. REV1-Polζ maintains the viability of HR-deficient cancer cells through mutagenic repair of PRIMPOL-dependent ssDNA gaps [J]. Mol Cell. 2021; 81(19): 4008-4025.e7.

[264]

Jaaks P, Coker EA, Vis DJ, et al. Effective drug combinations in breast, colon and pancreatic cancer cells [J]. Nature. 2022; 603(7899): 166-173.

[265]

Herbert KJ, Upstill-Goddard R, Dreyer SB, et al. Sequential ATR and PARP inhibition overcomes acquired DNA damaging agent resistance in pancreatic ductal adenocarcinoma [J]. Br J Cancer. 2025; 133(3): 381-393.

[266]

Besse B, Pons-Tostivint E, Park K, et al. Biomarker-directed targeted therapy plus durvalumab in advanced non-small-cell lung cancer: a phase 2 umbrella trial [J]. Nat Med. 2024; 30(3): 716-729.

RIGHTS & PERMISSIONS

2026 The Author(s). Clinical and Translational Medicine published by John Wiley & Sons Australia, Ltd on behalf of Shanghai Institute of Clinical Bioinformatics.

PDF

6

Accesses

0

Citation

Detail

Sections
Recommended

/