ATG16L1 restrains macrophage NLRP3 activation and alveolar epithelial cell injury during septic lung injury

Yan Bai , Xinyu Zhan , Qing Zhu , Xingyue Ji , Yingying Lu , Yiyun Gao , Fei Li , Zhu Guan , Haoming Zhou , Zhuqing Rao

Clinical and Translational Medicine ›› 2025, Vol. 15 ›› Issue (4) : e70289

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Clinical and Translational Medicine ›› 2025, Vol. 15 ›› Issue (4) : e70289 DOI: 10.1002/ctm2.70289
RESEARCH ARTICLE

ATG16L1 restrains macrophage NLRP3 activation and alveolar epithelial cell injury during septic lung injury

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Abstract

Background: The lung is the organ most commonly affected by sepsis. Additionally, acute lung injury (ALI) resulting from sepsis is a major cause of death in intensive care units. Macrophages are essential for maintaining normal lung physiological functions and are implicated in various pulmonary diseases. An essential autophagy protein, autophagy-related protein 16-like 1 (ATG16L1), is crucial for the inflammatory activation of macrophages.

Methods: ATG16L1 expression was measured in lung from mice with sepsis. ALI was induced in myeloid ATG16L1-, NLRP3- and STING-deficient mice by intraperitoneal injection of lipopolysaccharide (LPS, 10 mg/kg). Using immunofluorescence and flow cytometry to assess the inflammatory status of LPS-treated bone marrow-derived macrophages (BMDMs). A co-culture system of BMDMs and MLE-12 cells was established in vitro.

Results: Myeloid ATG16L1-deficient mice exhibited exacerbated septic lung injury and a more intense inflammatory response following LPS treatment. Mechanistically, ATG16L1-deficient macrophages exhibited impaired LC3B lipidation, damaged mitochondria and reactive oxygen species (ROS) accumulation. These abnormalities led to the activation of NOD-like receptor family pyrin domain-containing protein 3 (NLRP3), subsequently enhancing proinflammatory response. Overactivated ATG16L1-deficient macrophages aggravated the damage to alveolar epithelial cells and enhanced the release of double-stranded DNA (dsDNA), thereby promoting STING activation and subsequent NLRP3 activation in macrophages, leading to positive feedback activation of macrophage NLRP3 signalling. Scavenging mitochondrial ROS or inhibiting STING activation effectively suppresses NLRP3 activation in macrophages and alleviates ALI. Furthermore, overexpression of myeloid ATG16L1 limits NLRP3 activation and reduces the severity of ALI.

Conclusions: Our findings reveal a new role for ATG16L1 in regulating macrophage NLRP3 feedback activation during sepsis, suggesting it as a potential therapeutic target for treating sepsis-induced ALI.

Keywords

acute lung injury / ATG16L / macrophages / NLRP3 inflammasome / STING

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Yan Bai, Xinyu Zhan, Qing Zhu, Xingyue Ji, Yingying Lu, Yiyun Gao, Fei Li, Zhu Guan, Haoming Zhou, Zhuqing Rao. ATG16L1 restrains macrophage NLRP3 activation and alveolar epithelial cell injury during septic lung injury. Clinical and Translational Medicine, 2025, 15(4): e70289 DOI:10.1002/ctm2.70289

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References

[1]

van der Poll T, van de Veerdonk FL, Scicluna BP, Netea MG. The immunopathology of sepsis and potential therapeutic targets. Nat Rev Immunol. 2017; 17(7): 407-420.

[2]

Rudd KE, Johnson SC, Agesa KM, et al. Global, regional, and national sepsis incidence and mortality, 1990-2017: analysis for the Global Burden of Disease Study. Lancet. 2020; 395(10219): 200-211.

[3]

Martin GS, Mannino DM, Eaton S, Moss M. The epidemiology of sepsis in the United States from 1979 through 2000. N Engl J Med. 2003; 348(16): 1546-1554.

[4]

Aziz M, Ode Y, Zhou M, et al. B-1a cells protect mice from sepsis-induced acute lung injury. Mol Med. 2018; 24(1): 26.

[5]

Singer M, Deutschman CS, Seymour CW, et al. The Third International Consensus Definitions for Sepsis and Septic Shock (Sepsis-3). JAMA. 2016; 315(8): 801-810.

[6]

Nedeva C. Inflammation and cell death of the innate and adaptive immune system during sepsis. Biomolecules. 2021; 11(7): 1011.

[7]

van der Poll T, Shankar-Hari M, Wiersinga WJ. The immunology of sepsis. Immunity. 2021; 54(11): 2450-2464.

[8]

Mikkelsen ME, Shah CV, Meyer NJ, et al. The epidemiology of acute respiratory distress syndrome in patients presenting to the emergency department with severe sepsis. Shock. 2013; 40(5): 375-381.

[9]

Magupalli VG, Negro R, Tian Y, et al. HDAC6 mediates an aggresome-like mechanism for NLRP3 and pyrin inflammasome activation. Science. 2020; 369(6510): eaas8995.

[10]

Zhong WJ, Liu T, Yang HH, et al. TREM-1 governs NLRP3 inflammasome activation of macrophages by firing up glycolysis in acute lung injury. Int J Biol Sci. 2023; 19(1): 242-257.

[11]

Wu D, Zhang H, Wu Q, et al. Sestrin 2 protects against LPS-induced acute lung injury by inducing mitophagy in alveolar macrophages. Life Sci. 2021; 267: 118941.

[12]

Levine B, Mizushima N, Virgin HW. Autophagy in immunity and inflammation. Nature. 2011; 469(7330): 323-335.

[13]

Deretic V, Saitoh T, Akira S. Autophagy in infection, inflammation and immunity. Nat Rev Immunol. 2013; 13(10): 722-737.

[14]

Pu Q, Gan C, Li R, et al. Atg7 deficiency intensifies inflammasome activation and pyroptosis in pseudomonas sepsis. J Immunol. 2017; 198(8): 3205-3213.

[15]

Otomo C, Metlagel Z, Takaesu G, Otomo T. Structure of the human ATG12∼ATG5 conjugate required for LC3 lipidation in autophagy. Nat Struct Mol Biol. 2013; 20(1): 59-66.

[16]

Gong X, Wang Y, Tang Y, et al. ATG16L1 adopts a dual-binding site mode to interact with WIPI2b in autophagy. Sci Adv. 2023; 9(9): eadf0824.

[17]

Magné J, Green DR. LC3-associated endocytosis and the functions of Rubicon and ATG16L1. Sci Adv. 2022; 8(43): eabo5600.

[18]

Saitoh T, Fujita N, Jang MH, et al. Loss of the autophagy protein Atg16L1 enhances endotoxin-induced IL-1beta production. Nature. 2008; 456(7219): 264-268.

[19]

Aden K, Tran F, Ito G, et al. ATG16L1 orchestrates interleukin-22 signaling in the intestinal epithelium via cGAS‒STING. J Exp Med. 2018; 215(11): 2868-2886.

[20]

Zhong W, Rao Z, Xu J, et al. Defective mitophagy in aged macrophages promotes mitochondrial DNA cytosolic leakage to activate STING signaling during liver sterile inflammation. Aging Cell. 2022; 21(6): e13622.

[21]

Yang HH, Duan JX, Liu SK, et al. A COX-2/sEH dual inhibitor PTUPB alleviates lipopolysaccharide-induced acute lung injury in mice by inhibiting NLRP3 inflammasome activation. Theranostics. 2020; 10(11): 4749-4761.

[22]

Guey B, Bodnar M, Manié SN, Tardivel A, Petrilli V. Caspase-1 autoproteolysis is differentially required for NLRP1b and NLRP3 inflammasome function. Proc Natl Acad Sci U S A. 2014; 111(48): 17254-17259.

[23]

Li F, Bai Y, Guan Z, et al. Dexmedetomidine attenuates sepsis-associated acute lung injury by regulating macrophage efferocytosis through the ROS/ADAM10/AXL pathway. Int Immunopharmacol. 2024; 142(pt A): 112832.

[24]

Yang Y, Wang H, Kouadir M, Song H, Shi F. Recent advances in the mechanisms of NLRP3 inflammasome activation and its inhibitors. Cell Death Dis. 2019; 10(2): 128.

[25]

Liu Z, Wang M, Wang X, et al. XBP1 deficiency promotes hepatocyte pyroptosis by impairing mitophagy to activate mtDNA‒cGAS‒STING signaling in macrophages during acute liver injury. Redox Biol. 2022; 52: 102305.

[26]

Galluzzi L, Baehrecke EH, Ballabio A, et al. Molecular definitions of autophagy and related processes. EMBO J. 2017; 36(13): 1811-1836.

[27]

Zhang J, Zhang M, Huo XK, et al. Macrophage inactivation by small molecule wedelolactone via targeting sEH for the treatment of LPS-induced acute lung injury. ACS Cent Sci. 2023; 9(3): 440-456.

[28]

Ning L, Wei W, Wenyang J, Rui X, Qing G. Cytosolic DNA‒STING‒NLRP3 axis is involved in murine acute lung injury induced by lipopolysaccharide. Clin Transl Med. 2020; 10(7): e228.

[29]

Jiang T, Liu E, Li Z, et al. SIRT1‒Rab7 axis attenuates NLRP3 and STING activation through late endosomal-dependent mitophagy during sepsis-induced acute lung injury. Int J Surg. 2024; 110(5): 2649-2668.

[30]

Liu N, Pang X, Zhang H, Ji P. The cGAS‒STING pathway in bacterial infection and bacterial immunity. Front Immunol. 2021; 12: 814709.

[31]

Zhong W, Rao Z, Rao J, et al. Aging aggravated liver ischemia and reperfusion injury by promoting STING-mediated NLRP3 activation in macrophages. Aging Cell. 2020; 19(8): e13186.

[32]

Li N, Zhou H, Wu H, et al. STING‒IRF3 contributes to lipopolysaccharide-induced cardiac dysfunction, inflammation, apoptosis and pyroptosis by activating NLRP3. Redox Biol. 2019; 24: 101215.

[33]

Simovic I, Hilmi I, Ng RT, et al. ATG16L1 rs2241880/T300A increases susceptibility to perianal Crohn's disease: an updated meta-analysis on inflammatory bowel disease risk and clinical outcomes. United Eur Gastroenterol J. 2024; 12(1): 103-121.

[34]

Li Y, Zhou D, Ren Y, et al. Mir223 restrains autophagy and promotes CNS inflammation by targeting ATG16L1. Autophagy. 2019; 15(3): 478-492.

[35]

Rubio I, Osuchowski MF, Shankar-Hari M, et al. Current gaps in sepsis immunology: new opportunities for translational research. Lancet Infect Dis. 2019; 19(12): e422-e436.

[36]

Ye C, Li H, Bao M, Zhuo R, Jiang G, Wang W. Alveolar macrophage-derived exosomes modulate severity and outcome of acute lung injury. Aging. 2020; 12(7): 6120-6128.

[37]

Cakarova L, Marsh LM, Wilhelm J, et al. Macrophage tumor necrosis factor-alpha induces epithelial expression of granulocyte-macrophage colony-stimulating factor: impact on alveolar epithelial repair. Am J Respir Crit Care Med. 2009; 180(6): 521-532.

[38]

Fu J, Wu H. Structural mechanisms of NLRP3 inflammasome assembly and activation. Annu Rev Immunol. 2023; 41: 301-316.

[39]

Sefik E, Qu R, Junqueira C, et al. Inflammasome activation in infected macrophages drives COVID-19 pathology. Nature. 2022; 606(7914): 585-593.

[40]

Ying Y, Mao Y, Yao M. NLRP3 inflammasome activation by microRNA-495 promoter methylation may contribute to the progression of acute lung injury. Mol Ther Nucleic Acids. 2019; 18: 801-814.

[41]

Sorbara MT, Ellison LK, Ramjeet M, et al. The protein ATG16L1 suppresses inflammatory cytokines induced by the intracellular sensors Nod1 and Nod2 in an autophagy-independent manner. Immunity. 2013; 39(5): 858-873.

[42]

Pizzino G, Irrera N, Cucinotta M, et al. Oxidative stress: harms and benefits for human health. Oxid Med Cell Longev. 2017; 2017: 8416763.

[43]

Kasai S, Shimizu S, Tatara Y, Mimura J, Itoh K. Regulation of Nrf2 by mitochondrial reactive oxygen species in physiology and pathology. Biomolecules. 2020; 10(2): 320.

[44]

Liu B, Chen Y, St Clair DK. ROS and p53: a versatile partnership. Free Radic Biol Med. 2008; 44(8): 1529-1535.

[45]

Cai J, Pires KM, Ferhat M, et al. Autophagy ablation in adipocytes induces insulin resistance and reveals roles for lipid peroxide and Nrf2 signaling in adipose-liver crosstalk. Cell Rep. 2018; 25(7): 1708-1717.e5.

[46]

Ni HM, Bockus A, Boggess N, Jaeschke H, Ding WX. Activation of autophagy protects against acetaminophen-induced hepatotoxicity. Hepatology. 2012; 55(1): 222-232.

[47]

Herb M, Schramm M. Functions of ROS in macrophages and antimicrobial immunity. Antioxidants. 2021; 10(2): 313.

[48]

Heid ME, Keyel PA, Kamga C, Shiva S, Watkins SC, Salter RD. Mitochondrial reactive oxygen species induces NLRP3-dependent lysosomal damage and inflammasome activation. J Immunol. 2013; 191(10): 5230-5238.

[49]

Ornatowski W, Lu Q, Yegambaram M, et al. Complex interplay between autophagy and oxidative stress in the development of pulmonary disease. Redox Biol. 2020; 36: 101679.

[50]

Fritz T, Niederreiter L, Adolph T, Blumberg RS, Kaser A. Crohn's disease: NOD2, autophagy and ER stress converge. Gut. 2011; 60(11): 1580-1588.

[51]

Conway KL, Kuballa P, Song JH, et al. Atg16l1 is required for autophagy in intestinal epithelial cells and protection of mice from Salmonella infection. Gastroenterology. 2013; 145(6): 1347-1357.

[52]

Tschurtschenthaler M, Adolph TE, Ashcroft JW, et al. Defective ATG16L1-mediated removal of IRE1α drives Crohn's disease-like ileitis. J Exp Med. 2017; 214(2): 401-422.

[53]

Wang L, Cai J, Zhao X, et al. Palmitoylation prevents sustained inflammation by limiting NLRP3 inflammasome activation through chaperone-mediated autophagy. Mol Cell. 2023; 83(2): 281-297.e10.

[54]

Ablasser A, Chen ZJ. cGAS in action: expanding roles in immunity and inflammation. Science. 2019; 363(6431): eaat8657.

[55]

Decout A, Katz JD, Venkatraman S, Ablasser A. The cGAS‒STING pathway as a therapeutic target in inflammatory diseases. Nat Rev Immunol. 2021; 21(9): 548-569.

[56]

Liu S, Yang B, Hou Y, et al. The mechanism of STING autoinhibition and activation. Mol Cell. 2023; 83(9): 1502-1518.e10.

[57]

Jiang M, Chen P, Wang L, et al. cGAS‒STING, an important pathway in cancer immunotherapy. J Hematol Oncol. 2020; 13(1): 81.

[58]

Zhao J, Zhen N, Zhou Q, et al. NETs promote inflammatory injury by activating cGAS‒STING pathway in acute lung injury. Int J Mol Sci. 2023; 24(6): 5125.

[59]

Gonugunta VK, Sakai T, Pokatayev V, et al. Trafficking-mediated STING degradation requires sorting to acidified endolysosomes and can be targeted to enhance anti-tumor response. Cell Rep. 2017; 21(11): 3234-3242.

[60]

Gentili M, Liu B, Papanastasiou M, et al. ESCRT-dependent STING degradation inhibits steady-state and cGAMP-induced signalling. Nat Commun. 2023; 14(1): 611.

[61]

Gui X, Yang H, Li T, et al. Autophagy induction via STING trafficking is a primordial function of the cGAS pathway. Nature. 2019; 567(7747): 262-266.

[62]

Xu Y, Wang Q, Wang J, et al. The cGAS‒STING pathway activates transcription factor TFEB to stimulate lysosome biogenesis and pathogen clearance. Immunity. 2025; 58(2): 309-325.e6.

[63]

Fischer TD, Wang C, Padman BS, Lazarou M, Youle RJ. STING induces LC3B lipidation onto single-membrane vesicles via the V-ATPase and ATG16L1-WD40 domain. J Cell Biol. 2020; 219(12): e202009128.

[64]

Wang Q, Bu Q, Liu M, et al. XBP1-mediated activation of the STING signalling pathway in macrophages contributes to liver fibrosis progression. JHEP Rep. 2022; 4(11): 100555.

[65]

Wang Q, Bu Q, Xu Z, et al. Macrophage ATG16L1 expression suppresses metabolic dysfunction-associated steatohepatitis progression by promoting lipophagy. Clin Mol Hepatol. 2024; 30(3): 515-538.

[66]

Younes OA, Elsherbiny DM, Hanna DMF, Gad AM, Azab SS. Tocilizumab unfolds colo-protective and immunomodulatory effect in experimentally induced ulcerative colitis via mitigating autophagy and ER stress signaling. Inflammopharmacology. 2024; 32(6): 3881-3898.

[67]

Cao T, Li AQ, Zhang Y, et al. Norwogonin attenuates LPS-induced acute lung injury through inhibiting Src/AKT1/NF-κB signaling pathway. Phytomedicine. 2025; 139: 156432.

[68]

Chen P, Wang Y, Tang H, et al. New applications of clioquinol in the treatment of inflammation disease by directly targeting arginine 335 of NLRP3. J Pharm Anal. 2025; 15(1): 101069.

[69]

Zeng QQ, Wang J, Yue RC, et al. Gelsevirine ameliorates sepsis-associated encephalopathy by inhibiting the STING signalling-mediated pyroptosis pathway in microglia. Phytomedicine. 2024; 135: 156071.

[70]

Hui S, Kan W, Qin S, et al. Glycyrrhiza uralensis polysaccharides ameliorates cecal ligation and puncture-induced sepsis by inhibiting the cGAS‒STING signaling pathway. Front Pharmacol. 2024; 15: 1374179.

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2025 The Author(s). Clinical and Translational Medicine published by John Wiley & Sons Australia, Ltd on behalf of Shanghai Institute of Clinical Bioinformatics.

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