Three-Dimensional Architecture of Ectopic Epithelium and Vasculature in Ovarian Endometriosis Revealed by Tissue-Clearing Imaging

Fanyuan Sun , Shuzhen Wang , Jinyan Zhao , Jinhua Leng , Xili Zhu , Chongdong Liu , Jing Chen , Jinming Guo , Bangjing Jiang , Haihe Zhou , Zhuoying Li , Hua Li , Menghui Li , Yongcun Qu

Cell Proliferation ›› 2026, Vol. 59 ›› Issue (8) : e70197

PDF (12088KB)
Cell Proliferation ›› 2026, Vol. 59 ›› Issue (8) :e70197 DOI: 10.1111/cpr.70197
ORIGINAL ARTICLE
Three-Dimensional Architecture of Ectopic Epithelium and Vasculature in Ovarian Endometriosis Revealed by Tissue-Clearing Imaging
Author information +
History +
PDF (12088KB)

Abstract

Ovarian endometriosis (OEM) is characterised by ectopic endometrial tissue growth within the ovary. In these ectopic lesions, the ectopic epithelium plays a crucial role in OEM progression and has been associated with malignant transformation in a subset of cases. However, conventional histology limits understanding of ectopic epithelial distribution, structure, and its perivascular microenvironment, thus impeding pathogenesis studies. To address this, we employed a modified tissue-clearing method and three-dimensional (3D) imaging to systematically characterise OEM, revealing key, previously unreported spatial characteristics. We found significantly higher densities of ectopic epithelium and vasculature in the outer cystic wall versus the inner. Furthermore, our method improved the detection rate of ectopic epithelium and revealed its morphological polymorphism at both tissue and cellular levels. Besides, we demonstrated that vessels preferentially cluster around ectopic epithelium, with their distribution pattern strongly linked to the location of ectopic epithelium. Strikingly, we observed endometrial-like structures in lesional vasculature in 3 of 49 cases, representing a novel morphological observation that warrants further investigation. This study significantly advances our understanding of OEM histopathology, offering insights for clinical diagnosis and treatment.

Cite this article

Download citation ▾
Fanyuan Sun, Shuzhen Wang, Jinyan Zhao, Jinhua Leng, Xili Zhu, Chongdong Liu, Jing Chen, Jinming Guo, Bangjing Jiang, Haihe Zhou, Zhuoying Li, Hua Li, Menghui Li, Yongcun Qu. Three-Dimensional Architecture of Ectopic Epithelium and Vasculature in Ovarian Endometriosis Revealed by Tissue-Clearing Imaging. Cell Proliferation, 2026, 59 (8) : e70197 DOI:10.1111/cpr.70197

登录浏览全文

4963

注册一个新账户 忘记密码

References

[1]

S. E. Bulun, B. D. Yilmaz, C. Sison, et al., “Endometriosis,” Endocrine Reviews 40 (2019): 1048–1079, https://doi.org/10.1210/er.2018-00242.

[2]

C. Chapron, L. Marcellin, B. Borghese, and P. Santulli, “Rethinking Mechanisms, Diagnosis and Management of Endometriosis,” Nature Reviews. Endocrinology 15 (2019): 666–682, https://doi.org/10.1038/s41574-019-0245-z.

[3]

H. S. Taylor, A. M. Kotlyar, and V. A. Flores, “Endometriosis Is a Chronic Systemic Disease: Clinical Challenges and Novel Innovations,” Lancet 397 (2021): 839–852, https://doi.org/10.1016/S0140-6736(21)00389-5.

[4]

H. Komatsu, H. Sunada, Y. Endo, H. Noma, F. Taniguchi, and T. Harada, “Evaluation of the Characteristics of Ovarian Endometriomas in Patients With Endometriosis: Efficacy of a Low-Dose Estrogen/Progestogen Combination,” Gynecologic and Obstetric Investigation 88 (2024): 375–383, https://doi.org/10.1159/000534666.

[5]

A. M. Sanchez, V. S. Vanni, L. Bartiromo, et al., “Is the Oocyte Quality Affected by Endometriosis? A Review of the Literature,” Journal of Ovarian Research 10 (2017): 43, https://doi.org/10.1186/s13048-017-0341-4.

[6]

P. Vercellini, P. Viganò, E. Somigliana, and L. Fedele, “Endometriosis: Pathogenesis and Treatment,” Nature Reviews Endocrinology 10 (2014): 261–275, https://doi.org/10.1038/nrendo.2013.255.

[7]

R. Cranney, G. Condous, and S. Reid, “An Update on the Diagnosis, Surgical Management, and Fertility Outcomes for Women With Endometrioma,” Acta Obstetricia et Gynecologica Scandinavica 96 (2017): 633–643, https://doi.org/10.1111/aogs.13114.

[8]

A. W. Horne and P. T. K. Saunders, “SnapShot: Endometriosis,” Cell 179 (2019): 1677–1677.e1, https://doi.org/10.1016/j.cell.2019.11.033.

[9]

H. Qu, L. Li, T.-L. Wang, T. Seckin, J. Segars, and I.-M. Shih, “Epithelial Cells in Endometriosis and Adenomyosis Upregulate STING Expression,” Reproductive Sciences 27 (2020): 1276–1284, https://doi.org/10.1007/s43032-019-00127-z.

[10]

L. Konrad, R. Dietze, M. A. Riaz, et al., “Epithelial–Mesenchymal Transition in Endometriosis—When Does It Happen?,” Journal of Clinical Medicine 9 (2020): 1915, https://doi.org/10.3390/jcm9061915.

[11]

J. Ruan, Q. Tian, S. Li, et al., “The IL-33-ST2 Axis Plays a Vital Role in Endometriosis via Promoting Epithelial–Mesenchymal Transition by Phosphorylating β-Catenin,” Cell Communication and Signaling: CCS 22 (2024): 318, https://doi.org/10.1186/s12964-024-01683-x.

[12]

D. Wang, Y. Luo, G. Wang, and Q. Yang, “CircATRNL1 Promotes Epithelial–Mesenchymal Transition in Endometriosis by Upregulating Yes-Associated Protein 1 in Vitro,” Cell Death & Disease 11 (2020): 594, https://doi.org/10.1038/s41419-020-02784-4.

[13]

G. W. Burns, Z. Fu, E. L. Vegter, et al., “Spatial Transcriptomic Analysis Identifies Epithelium-Macrophage Crosstalk in Endometriotic Lesions,” iScience 28 (2025): 111790, https://doi.org/10.1016/j.isci.2025.111790.

[14]

J. Yan, L. Zhou, M. Liu, et al., “Single-Cell Analysis Reveals Insights Into Epithelial Abnormalities in Ovarian Endometriosis,” Cell Reports 43 (2024): 113716, https://doi.org/10.1016/j.celrep.2024.113716.

[15]

Y. Qu, J. Zhang, S. Guo, et al., “Three-Dimensional Visualization of Mouse Endometrial Remodeling After Superovulation,” Frontiers in Cell and Development Biology 10 (2022): 933852, https://doi.org/10.3389/fcell.2022.933852.

[16]

M. Muntifering, D. Castranova, G. A. Gibson, E. Meyer, M. Kofron, and A. M. Watson, “Clearing for Deep Tissue Imaging,” Current Protocols in Cytometry 86 (2018): e38, https://doi.org/10.1002/cpcy.38.

[17]

H. R. Ueda, A. Ertürk, K. Chung, et al., “Tissue Clearing and Its Applications in Neuroscience,” Nature Reviews Neuroscience 21 (2020): 61–79, https://doi.org/10.1038/s41583-019-0250-1.

[18]

H. Mai, Z. Rong, S. Zhao, et al., “Scalable Tissue Labeling and Clearing of Intact Human Organs,” Nature Protocols 17 (2022): 2188–2215, https://doi.org/10.1038/s41596-022-00712-8.

[19]

S. I. Kubota, K. Takahashi, T. Mano, et al., “Whole-Organ Analysis of TGF-β-Mediated Remodelling of the Tumour Microenvironment by Tissue Clearing,” Communications Biology 4 (2021): 1–15, https://doi.org/10.1038/s42003-021-01786-y.

[20]

C. Pan, O. Schoppe, A. Parra-Damas, et al., “Deep Learning Reveals Cancer Metastasis and Therapeutic Antibody Targeting in the Entire Body,” Cell 179 (2019): 1661–1676.e19, https://doi.org/10.1016/j.cell.2019.11.013.

[21]

H. A. Messal, S. Alt, R. M. M. Ferreira, et al., “Tissue Curvature and Apicobasal Mechanical Tension Imbalance Instruct Cancer Morphogenesis,” Nature 566 (2019): 126–130, https://doi.org/10.1038/s41586-019-0891-2.

[22]

M. Yamaguchi, K. Yoshihara, K. Suda, et al., “Three-Dimensional Understanding of the Morphological Complexity of the Human Uterine Endometrium,” iScience 24 (2021): 102258, https://doi.org/10.1016/j.isci.2021.102258.

[23]

K. Tainaka, T. C. Murakami, E. A. Susaki, et al., “Chemical Landscape for Tissue Clearing Based on Hydrophilic Reagents,” Cell Reports 24 (2018): 2196–2210.e9, https://doi.org/10.1016/j.celrep.2018.07.056.

[24]

B. Yang, J. B. Treweek, R. P. Kulkarni, et al., “Single-Cell Phenotyping Within Transparent Intact Tissue Through Whole-Body Clearing,” Cell 158 (2014): 945–958, https://doi.org/10.1016/j.cell.2014.07.017.

[25]

J. B. Treweek, K. Y. Chan, N. C. Flytzanis, et al., “Whole-Body Tissue Stabilization and Selective Extractions via Tissue-Hydrogel Hybrids for High-Resolution Intact Circuit Mapping and Phenotyping,” Nature Protocols 10 (2015): 1860–1896, https://doi.org/10.1038/nprot.2015.122.

[26]

P. J. van der Linden, A. F. de Goeij, G. A. Dunselman, E. P. van der Linden, F. C. Ramaekers, and J. L. Evers, “Expression of Integrins and E-Cadherin in Cells From Menstrual Effluent, Endometrium, Peritoneal Fluid, Peritoneum, and Endometriosis,” Fertility and Sterility 61 (1994): 85–90, https://doi.org/10.1016/s0015-0282(16)56457-7.

[27]

K. N. Khan, M. Kitajima, K. Hiraki, A. Fujishita, M. Nakashima, and H. Masuzaki, “Involvement of Hepatocyte Growth Factor-Induced Epithelial-Mesenchymal Transition in Human Adenomyosis,” Biology of Reproduction 92 (2015): 35, https://doi.org/10.1095/biolreprod.114.124891.

[28]

Q. Zhang, X. Liu, and S.-W. Guo, “Progressive Development of Endometriosis and Its Hindrance by Anti-Platelet Treatment in Mice With Induced Endometriosis,” Reproductive Biomedicine Online 34 (2017): 124–136, https://doi.org/10.1016/j.rbmo.2016.11.006.

[29]

L. Muzii, A. Bianchi, F. Bellati, et al., “Histologic Analysis of Endometriomas: What the Surgeon Needs to Know,” Fertility and Sterility 87 (2007): 362–366, https://doi.org/10.1016/j.fertnstert.2006.06.055.

[30]

P. Vigano, M. Candiani, A. Monno, E. Giacomini, P. Vercellini, and E. Somigliana, “Time to Redefine Endometriosis Including Its Pro-Fibrotic Nature,” Human Reproduction 33 (2018): 347–352, https://doi.org/10.1093/humrep/dex354.

[31]

F. Manconi, E. Kable, G. Cox, R. Markham, and I. S. Fraser, “Whole-Mount Sections Displaying Microvascular and Glandular Structures in Human Uterus Using Multiphoton Excitation Microscopy,” Micron 34 (2003): 351–358, https://doi.org/10.1016/j.micron.2003.07.002.

[32]

I. Ñiguez Sevilla, F. Machado Linde, M. d. P. Marín Sánchez, et al., “Prognostic Importance of Atypical Endometriosis With Architectural Hyperplasia Versus Cytologic Atypia in Endometriosis-Associated Ovarian Cancer,” Journal of Gynecologic Oncology 30 (2019): e63, https://doi.org/10.3802/jgo.2019.30.e63.

[33]

I. M. Maier, A. C. Maier, A. Crișan, and L. Puşcaşiu, “Clinical and Pathological Significance of Cellular Atypia in Endometriosis,” Medicina 57 (2021): 453, https://doi.org/10.3390/medicina57050453.

[34]

S. Nasab, B. S. Bedrick, and M. S. Christianson, “Ethanol Sclerotherapy for Endometriomas: Ready for Prime Time?,” Fertility and Sterility 115 (2021): 100–101, https://doi.org/10.1016/j.fertnstert.2020.10.035.

[35]

K. Frankowska, I. Dymanowska-Dyjak, M. Abramiuk, and G. Polak, “The Efficacy and Safety of Transvaginal Ethanol Sclerotherapy in the Treatment of Endometrial Cysts-A Systematic Review,” International Journal of Molecular Sciences 25 (2024): 1337, https://doi.org/10.3390/ijms25021337.

[36]

L. Miquel, L. Preaubert, A. Gnisci, et al., “Transvaginal Ethanol Sclerotherapy for an Endometrioma in 10 Steps,” Fertility and Sterility 115 (2021): 259–260, https://doi.org/10.1016/j.fertnstert.2020.08.1422.

[37]

K. Suda, H. Nakaoka, K. Yoshihara, et al., “Clonal Expansion and Diversification of Cancer-Associated Mutations in Endometriosis and Normal Endometrium,” Cell Reports 24 (2018): 1777–1789, https://doi.org/10.1016/j.celrep.2018.07.037.

[38]

A. Parekh, S. Das, S. Parida, et al., “Multi-Nucleated Cells Use ROS to Induce Breast Cancer Chemo-Resistance in Vitro and in Vivo,” Oncogene 37 (2018): 4546–4561, https://doi.org/10.1038/s41388-018-0272-6.

[39]

R. Mirzayans, B. Andrais, and D. Murray, “Roles of Polyploid/Multinucleated Giant Cancer Cells in Metastasis and Disease Relapse Following Anticancer Treatment,” Cancers 10 (2018): 118, https://doi.org/10.3390/cancers10040118.

[40]

M. Suarez-Carmona, J. Lesage, D. Cataldo, and C. Gilles, “EMT and Inflammation: Inseparable Actors of Cancer Progression,” Molecular Oncology 11 (2017): 805–823, https://doi.org/10.1002/1878-0261.12095.

[41]

E. G. Fischer, “Nuclear Morphology and the Biology of Cancer Cells,” Acta Cytologica 64 (2020): 511–519, https://doi.org/10.1159/000508780.

[42]

Y. Ym and Y. Wx, “Epithelial-To-Mesenchymal Transition in the Development of Endometriosis,” Oncotarget 8 (2017): 16472, https://doi.org/10.18632/oncotarget.16472.

[43]

Z. I. Vincent-Mistiaen, “Epithelial-Mesenchymal Transition Links Inflammation and Fibrosis in the Pathogenesis of Endometriosis: A Narrative Review,” F&S Reviews 6 (2025): 100089, https://doi.org/10.1016/j.xfnr.2025.100089.

[44]

M. Zhou, T. Tian, and C. Wu, “Mechanism Underlying the Regulation of Mucin Secretion in the Uterus During Pregnancy,” International Journal of Molecular Sciences 24 (2023): 15896, https://doi.org/10.3390/ijms242115896.

[45]

A. M. Kelleher, F. J. DeMayo, and T. E. Spencer, “Uterine Glands: Developmental Biology and Functional Roles in Pregnancy,” Endocrine Reviews 40 (2019): 1424–1445, https://doi.org/10.1210/er.2018-00281.

[46]

M. W. Laschke and M. D. Menger, “Basic Mechanisms of Vascularization in Endometriosis and Their Clinical Implications,” Human Reproduction Update 24 (2018): 207–224, https://doi.org/10.1093/humupd/dmy001.

[47]

R. N. Taylor, D. I. Lebovic, D. Hornung, and M. D. Mueller, “Endocrine and Paracrine Regulation of Endometrial Angiogenesis,” Annals of the New York Academy of Sciences 943 (2001): 109–121, https://doi.org/10.1111/j.1749-6632.2001.tb03795.x.

[48]

F. Chishima, S. Hayakawa, K. Sugita, et al., “Increased Expression of Cyclooxygenase-2 in Local Lesions of Endometriosis Patients,” American Journal of Reproductive Immunology 48 (2002): 50–56, https://doi.org/10.1034/j.1600-0897.2002.01101.x.

[49]

J. Zhu, D. Mayr, C. Kuhn, S. Mahner, U. Jeschke, and V. von Schönfeldt, “Prostaglandin E2 Receptor EP1 in Healthy and Diseased Human Endometrium,” Histochemistry and Cell Biology 149 (2018): 153–160, https://doi.org/10.1007/s00418-017-1616-y.

[50]

B. Peng, H. Zhan, F. Alotaibi, G. M. Alkusayer, M. A. Bedaiwy, and P. J. Yong, “Nerve Growth Factor Is Associated With Sexual Pain in Women With Endometriosis,” Reproductive Sciences 25 (2018): 540–549, https://doi.org/10.1177/1933719117716778.

[51]

B. J. Van Voorhis, P. C. Huettner, M. R. Clark, and J. A. Hill, “Immunohistochemical Localization of Prostaglandin H Synthase in the Female Reproductive Tract and Endometriosis,” American Journal of Obstetrics and Gynecology 163 (1990): 57–62, https://doi.org/10.1016/s0002-9378(11)90667-x.

[52]

A. S. Laganà, S. Garzon, M. Götte, et al., “The Pathogenesis of Endometriosis: Molecular and Cell Biology Insights,” International Journal of Molecular Sciences 20 (2019): 5615, https://doi.org/10.3390/ijms20225615.

[53]

L. Konrad, R. Dietze, P. K. Kudipudi, F. Horné, and I. Meinhold-Heerlein, “Endometriosis in MRKH Cases as a Proof for the Coelomic Metaplasia Hypothesis?,” Reproduction 158 (2019): R41–R47, https://doi.org/10.1530/REP-19-0106.

[54]

D. Djokovic and C. Calhaz-Jorge, “Somatic Stem Cells and Their Dysfunction in Endometriosis,” Frontiers in Surgery 1 (2014): 51, https://doi.org/10.3389/fsurg.2014.00051.

[55]

N. Pluchino and H. S. Taylor, “Endometriosis and Stem Cell Trafficking,” Reproductive Sciences 23 (2016): 1616–1619, https://doi.org/10.1177/1933719116671219.

[56]

J. A. Sampson, “Metastatic or Embolic Endometriosis, due to the Menstrual Dissemination of Endometrial Tissue Into the Venous Circulation,” American Journal of Pathology 3 (1927): 93–110.43.

[57]

M. Abramiuk, E. Grywalska, P. Małkowska, O. Sierawska, R. Hrynkiewicz, and P. Niedźwiedzka-Rystwej, “The Role of the Immune System in the Development of Endometriosis,” Cells 11 (2022): 2028, https://doi.org/10.3390/cells11132028.

[58]

T. Maruyama and Y. Yoshimura, “Stem Cell Theory for the Pathogenesis of Endometriosis,” Frontiers in Bioscience 4 (2012): 2754–2763, https://doi.org/10.2741/E589.

[59]

J. Li, Y. Liu, K. Du, et al., “Endometriosis in Para-Aortic Lymph Node Resembling a Malignancy: A Case Report and Literature Review,” BMC Womens Health 22 (2022): 101, https://doi.org/10.1186/s12905-022-01659-4.

[60]

H. Ye, C. Shen, Q. Quan, M. Xi, and L. Li, “Endometriosis of the Skeletal Muscular System (ESMS): A Systematic Review,” BMC Womens Health 23 (2023): 37, https://doi.org/10.1186/s12905-023-02184-8.

[61]

K. N. Khan, M. Kitajima, K. Hiraki, et al., “Changes in Tissue Inflammation, Angiogenesis and Apoptosis in Endometriosis, Adenomyosis and Uterine Myoma After GnRH Agonist Therapy,” Human Reproduction 25 (2010): 642–653, https://doi.org/10.1093/humrep/dep437.

[62]

J. Donnez, M. Nisolle, S. Gillerot, V. Anaf, F. Clerckx-Braun, and F. Casanas-Roux, “Ovarian Endometrial Cysts: The Role of Gonadotropin-Releasing Hormone Agonist and/or Drainage,” Fertility and Sterility 62 (1994): 63–66, https://doi.org/10.1016/s0015-0282(16)56816-2.

[63]

M. V. Gómez-Gaviro, D. Sanderson, J. Ripoll, and M. Desco, “Biomedical Applications of Tissue Clearing and Three-Dimensional Imaging in Health and Disease,” iScience 23 (2020): 101432, https://doi.org/10.1016/j.isci.2020.101432.

[64]

K. Matsumoto, T. T. Mitani, S. A. Horiguchi, et al., “Advanced CUBIC Tissue Clearing for Whole-Organ Cell Profiling,” Nature Protocols 14 (2019): 3506–3537, https://doi.org/10.1038/s41596-019-0240-9.

[65]

T. Tian, Z. Yang, and X. Li, “Tissue Clearing Technique: Recent Progress and Biomedical Applications,” Journal of Anatomy 238 (2021): 489–507, https://doi.org/10.1111/joa.13309.

[66]

“Tutorial: Practical Considerations for Tissue Clearing and Imaging—PubMed,”https://pubmed.ncbi.nlm.nih.gov/34021294/.

Rights & permissions

2026 The Author(s). Cell Proliferation published by Beijing Institute for Stem Cell and Regenerative Medicine and John Wiley & Sons Ltd.

PDF (12088KB)

0

Accesses

0

Citation

Detail

Sections
Recommended

/

〈 〉