Osteogenesis imperfecta mutations in plastin 3 lead to impaired calcium regulation of actin bundling

Christopher L. Schwebach , Elena Kudryashova , Weili Zheng , Matthew Orchard , Harper Smith , Lucas A. Runyan , Edward H. Egelman , Dmitri S. Kudryashov

Bone Research ›› 2020, Vol. 8 ›› Issue (1) : 21

PDF
Bone Research ›› 2020, Vol. 8 ›› Issue (1) : 21 DOI: 10.1038/s41413-020-0095-2
Article

Osteogenesis imperfecta mutations in plastin 3 lead to impaired calcium regulation of actin bundling

Author information +
History +
PDF

Abstract

Mutations in actin-bundling protein plastin 3 (PLS3) emerged as a cause of congenital osteoporosis, but neither the role of PLS3 in bone development nor the mechanisms underlying PLS3-dependent osteoporosis are understood. Of the over 20 identified osteoporosis-linked PLS3 mutations, we investigated all five that are expected to produce full-length protein. One of the mutations distorted an actin-binding loop in the second actin-binding domain of PLS3 and abolished F-actin bundling as revealed by cryo-EM reconstruction and protein interaction assays. Surprisingly, the remaining four mutants fully retained F-actin bundling ability. However, they displayed defects in Ca2+ sensitivity: two of the mutants lost the ability to be inhibited by Ca2+, while the other two became hypersensitive to Ca2+. Each group of the mutants with similar biochemical properties showed highly characteristic cellular behavior. Wild-type PLS3 was distributed between lamellipodia and focal adhesions. In striking contrast, the Ca2+-hyposensitive mutants were not found at the leading edge but localized exclusively at focal adhesions/stress fibers, which displayed reinforced morphology. Consistently, the Ca2+-hypersensitive PLS3 mutants were restricted to lamellipodia, while chelation of Ca2+ caused their redistribution to focal adhesions. Finally, the bundling-deficient mutant failed to co-localize with any F-actin structures in cells despite a preserved F-actin binding through a non-mutation-bearing actin-binding domain. Our findings revealed that severe osteoporosis can be caused by a mutational disruption of the Ca2+-controlled PLS3’s cycling between adhesion complexes and the leading edge. Integration of the structural, biochemical, and cell biology insights enabled us to propose a molecular mechanism of plastin activity regulation by Ca2+.

Cite this article

Download citation ▾
Christopher L. Schwebach, Elena Kudryashova, Weili Zheng, Matthew Orchard, Harper Smith, Lucas A. Runyan, Edward H. Egelman, Dmitri S. Kudryashov. Osteogenesis imperfecta mutations in plastin 3 lead to impaired calcium regulation of actin bundling. Bone Research, 2020, 8(1): 21 DOI:10.1038/s41413-020-0095-2

登录浏览全文

4963

注册一个新账户 忘记密码

References

[1]

Ensrud KE, Crandall CJ. Osteoporosis. Ann. Intern Med, 2017, 167:ITC17-ITC32

[2]

Van Dijk FS, Sillence DO. Osteogenesis imperfecta: clinical diagnosis, nomenclature and severity assessment. Am. J. Med Genet A, 2014, 164A:1470-1481

[3]

Lindahl K et al. Genetic epidemiology, prevalence, and genotype-phenotype correlations in the Swedish population with osteogenesis imperfecta. Eur. J. Hum. Genet, 2015, 23:1042-1050

[4]

Forlino A, Cabral WA, Barnes AM, Marini JC. New perspectives on osteogenesis imperfecta. Nat. Rev. Endocrinol., 2011, 7:540-557

[5]

Kampe AJ et al. PLS3 sequencing in childhood-onset primary osteoporosis identifies two novel disease-causing variants. Osteoporos. Int., 2017, 28:3023-3032

[6]

Balasubramanian M et al. Novel PLS3 variants in X-linked osteoporosis: exploring bone material properties. Am. J. Med. Genet. A, 2018, 176:1578-1586

[7]

Costantini A et al. A novel frameshift deletion in PLS3 causing severe primary osteoporosis. J. Hum. Genet., 2018, 63:923-926

[8]

Chen T et al. Clinical, genetics, and bioinformatic characterization of mutations affecting an essential region of PLS3 in patients with BMND18. Int J. Endocrinol., 2018, 2018:8953217

[9]

Kannu P, Mahjoub A, Babul-Hirji R, Carter MT, Harrington J. PLS3 mutations in X-Linked osteoporosis: clinical and bone characteristics of two novel mutations. Horm. Res Paediatr., 2017, 88:298-304

[10]

Lv F et al. A novel large fragment deletion in PLS3 causes rare X-linked early-onset osteoporosis and response to zoledronic acid. Osteoporos. Int., 2017, 28:2691-2700

[11]

Laine CM et al. A novel splice mutation in PLS3 causes X-linked early onset low-turnover osteoporosis. J. Bone Miner. Res., 2015, 30:437-445

[12]

Nishi E et al. Exome sequencing-based identification of mutations in non-syndromic genes among individuals with apparently syndromic features. Am. J. Med. Genet. Part A, 2016, 170:2889-2894

[13]

van Dijk FS et al. PLS3 mutations in X-linked osteoporosis with fractures. N. Engl. J. Med., 2013, 369:1529-1536

[14]

Fahiminiya S et al. Osteoporosis caused by mutations in PLS3: clinical and bone tissue characteristics. J. Bone Miner. Res., 2014, 29:1805-1814

[15]

Kampe AJ et al. PLS3 deletions lead to severe spinal osteoporosis and disturbed bone matrix mineralization. J. Bone Miner. Res., 2017, 32:2394-2404

[16]

Wang L et al. A novel nonsense variant in PLS3 causes X-linked osteoporosis in a Chinese family. Ann. Hum. Genet., 2020, 84:92-96

[17]

Cao YJ, Zhang H, Zhang ZL. Novel mutations in the Wnt1, Tmem38b, P4hb, and Pls3 genes in four unrelated Chinese families with osteogenesis imperfecta. Endocr. Pract., 2019, 25:230-241

[18]

Shinomiya H. Plastin family of actin-bundling proteins: its functions in leukocytes, neurons, intestines, and cancer. Int. J. cell Biol., 2012, 2012:213492

[19]

Lin CS, Park T, Chen ZP, Leavitt J. Human plastin genes: comparative gene structure, chromosome location, and differential expression in normal and neoplastic cells. J. Biol. Chem., 1993, 268:2781-2792

[20]

Brun C et al. T-plastin expression downstream to the calcineurin/NFAT pathway is involved in keratinocyte migration. PloS one, 2014, 9

[21]

Hagiwara M et al. Interaction of activated Rab5 with actin-bundling proteins, L- and T-plastin and its relevance to endocytic functions in mammalian cells. Biochem. Biophys. Res. Commun., 2011, 407:615-619

[22]

Ikeda H et al. The role of T-fimbrin in the response to DNA damage: silencing of T-fimbrin by small interfering RNA sensitizes human liver cancer cells to DNA-damaging agents. Int. J. Oncol., 2005, 27:933-940

[23]

Wottawa M et al. Hypoxia-stimulated membrane trafficking requires T-Plastin. Acta Physiol., 2017, 221:59-73

[24]

Yorgan TA et al. Mice lacking plastin-3 display a specific defect of cortical bone acquisition. Bone, 2020, 130:115062

[25]

Dor-On, E. et al. T-plastin is essential for basement membrane assembly and epidermal morphogenesis. Sci. Signal. 10, pii: eaal3154 (2017).

[26]

Boycott, K. M. & Innes, A. M. 39th Annual David W. Smith workshop on malformations and morphogenesis: abstracts of the 2018 annual meeting. Am J Med Genet A, 674–746 (2019).

[27]

Schwebach CL, Agrawal R, Lindert S, Kudryashova E, Kudryashov DS. The roles of actin-binding domains 1 and 2 in the calcium-dependent regulation of actin filament bundling by human plastins. J. Mol. Biol., 2017, 429:2490-2508

[28]

Kishor A, Fritz SE, Hogg JR. Nonsense-mediated mRNA decay: the challenge of telling right from wrong in a complex transcriptome. Wiley Interdiscip. Rev. RNA, 2019, 10

[29]

Miller JN, Pearce DA. Nonsense-mediated decay in genetic disease: friend or foe? Mutat. Res. Rev. Mutat. Res., 2014, 762:52-64

[30]

Klein MG et al. Structure of the actin crosslinking core of fimbrin. Structure, 2004, 12:999-1013

[31]

Galkin VE, Orlova A, Cherepanova O, Lebart MC, Egelman EH. High-resolution cryo-EM structure of the F-actin-fimbrin/plastin ABD2 complex. Proc. Natl Acad. Sci. USA, 2008, 105:1494-1498

[32]

Egelman EH. A robust algorithm for the reconstruction of helical filaments using single-particle methods. Ultramicroscopy, 2000, 85:225-234

[33]

Iwamoto DV et al. Structural basis of the filamin A actin-binding domain interaction with F-actin. Nat. Struct. Mol. Biol., 2018, 25:918-927

[34]

Rosenberg N, Rosenberg O, Soudry M. Osteoblasts in bone physiology-mini review. Rambam Maimonides Med. J., 2012, 3

[35]

Lewis KJ et al. Osteocyte calcium signals encode strain magnitude and loading frequency in vivo. Proc. Natl Acad. Sci. USA, 2017, 114:11775-11780

[36]

Genetos DC, Geist DJ, Liu D, Donahue HJ, Duncan RL. Fluid shear-induced ATP secretion mediates prostaglandin release in MC3T3-E1 osteoblasts. J. Bone Miner. Res., 2005, 20:41-49

[37]

Cao, C. et al. Increased Ca2+ signaling through CaV1.2 promotes bone formation and prevents estrogen deficiency-induced bone loss. JCI insight 2, pii: 95512 (2017).

[38]

Lu XL, Huo B, Park M, Guo XE. Calcium response in osteocytic networks under steady and oscillatory fluid flow. Bone, 2012, 51:466-473

[39]

Ishida H, Jensen KV, Woodman AG, Hyndman ME, Vogel HJ. The calcium-dependent switch Helix of L-Plastin regulates actin bundling. Sci. Rep., 2017, 7

[40]

Miyakawa T et al. Different Ca(2)(+)-sensitivities between the EF-hands of T- and L-plastins. Biochem. Biophys. Res. Commun., 2012, 429:137-141

[41]

Li Nan, Mruk Dolores D., Wong Chris K. C., Lee Will M., Han Daishu, Cheng C. Yan. Actin-bundling protein plastin 3 is a regulator of ectoplasmic specialization dynamics during spermatogenesis in the rat testis. The FASEB Journal, 2015, 29 9 3788-3805

[42]

Lyon AN et al. Calcium binding is essential for plastin 3 function in Smn-deficient motoneurons. Hum. Mol. Genet., 2014, 23:1990-2004

[43]

Watanabe N. Fluorescence single-molecule imaging of actin turnover and regulatory mechanisms. Methods Enzymol., 2012, 505:219-232

[44]

Dyle MC, Kolakada D, Cortazar MA, Jagannathan S. How to get away with nonsense: mechanisms and consequences of escape from nonsense-mediated RNA decay. Wiley Interdiscip. Rev. RNA, 2020, 11

[45]

Giganti A et al. Actin-filament cross-linking protein T-plastin increases Arp2/3-mediated actin-based movement. J. Cell Sci., 2004, 118:1255-1265

[46]

Skau CT et al. Actin filament bundling by fimbrin is important for endocytosis, cytokinesis, and polarization in fission yeast. J. Biol. Chem., 2011, 286:26964-26977

[47]

Glenney Jr,JR, Kaulfus P, Matsudaira P, Weber K. F-actin binding and bundling properties of fimbrin, a major cytoskeletal protein of microvillus core filaments. J. Biol. Chem., 1981, 256:9283-9288

[48]

Christensen, J. R. et al. Competition between topomyosin, fimbrin, and ADF/Cofilin drives their sorting to distinct actin filament networks. eLife 6, pii: e23152 (2017).

[49]

Fong JH et al. Intrinsic disorder in protein interactions: insights from a comprehensive structural analysis. PLoS Comput Biol., 2009, 5

[50]

Uversky VN. Intrinsic disorder-based protein interactions and their modulators. Curr. Pharm. Des., 2013, 19:4191-4213

[51]

Neugebauer J et al. Plastin 3 influences bone homeostasis through regulation of osteoclast activity. Hum. Mol. Genet., 2018, 27:4249-4262

[52]

Kamioka H, Sugawara Y, Honjo T, Yamashiro T, Takano-Yamamoto T. Terminal differentiation of osteoblasts to osteocytes is accompanied by dramatic changes in the distribution of actin-binding proteins. J. Bone Miner. Res., 2004, 19:471-478

[53]

Galli C, Passeri G, Macaluso GM. Osteocytes and WNT: the mechanical control of bone formation. J. Dent. Res., 2010, 89:331-343

[54]

Santos A, Bakker AD, Klein-Nulend J. The role of osteocytes in bone mechanotransduction. Osteoporos. Int, 2009, 20:1027-1031

[55]

Temiyasathit S, Jacobs CR. Osteocyte primary cilium and its role in bone mechanotransduction. Ann. N. Y Acad. Sci., 2010, 1192:422-428

[56]

Yavropoulou MP, Yovos JG. The molecular basis of bone mechanotransduction. J. Musculoskelet. Neuronal Interact., 2016, 16:221-236

[57]

Winslow MM et al. Calcineurin/NFAT signaling in osteoblasts regulates bone mass. Dev. Cell, 2006, 10:771-782

[58]

Li J, Duncan RL, Burr DB, Turner CH. L-type calcium channels mediate mechanically induced bone formation in vivo. J. Bone Miner. Res., 2002, 17:1795-1800

[59]

Sun Z, Costell M, Fassler R. Integrin activation by talin, kindlin and mechanical forces. Nat. Cell Biol., 2019, 21:25-31

[60]

O’Neill CA, Galasko CS. Calcium mobilization is required for spreading in human osteoblasts. Calcif. Tissue Int., 2000, 67:53-59

[61]

Wei C et al. Calcium flickers steer cell migration. Nature, 2009, 457:901-905

[62]

Giannone G, Ronde P, Gaire M, Haiech J, Takeda K. Calcium oscillations trigger focal adhesion disassembly in human U87 astrocytoma cells. J. Biol. Chem., 2002, 277:26364-26371

[63]

Giannone G et al. Calcium rises locally trigger focal adhesion disassembly and enhance residency of focal adhesion kinase at focal adhesions. J. Biol. Chem., 2004, 279:28715-28723

[64]

Leucht P, Kim JB, Currey JA, Brunski J, Helms JA. FAK-mediated mechanotransduction in skeletal regeneration. PLoS ONE, 2007, 2

[65]

Kudryashova E et al. Actin cross-linking toxin is a universal inhibitor of tandem-organized and oligomeric G-actin binding proteins. Curr. Biol.: CB, 2018, 28:1536-1547 e1539

[66]

Spudich JA, Watt S. The regulation of rabbit skeletal muscle contraction. J. Biol. Chem., 1971, 246:4866-4871

[67]

Durer ZA et al. Structural states and dynamics of the D-loop in actin. Biophys. J., 2012, 103:930-939

[68]

Kudryashova E et al. Thermodynamic instability of viral proteins is a pathogen-associated molecular pattern targeted by human defensins. Sci. Rep., 2016, 6

[69]

Kudryashova E et al. Human defensins facilitate local unfolding of thermodynamically unstable regions of bacterial protein toxins. Immunity, 2014, 41:709-721

[70]

Schoenmakers TJ, Visser GJ, Flik G, Theuvenet AP. CHELATOR: an improved method for computing metal ion concentrations in physiological solutions. Bio. Techn., 1992, 12:870-874 876-879

[71]

Schindelin J et al. Fiji: an open-source platform for biological-image analysis. Nat. Methods, 2012, 9:676-682

[72]

Schindelin J, Rueden CT, Hiner MC, Eliceiri KW. The ImageJ ecosystem: an open platform for biomedical image analysis. Mol. Reprod. Dev., 2015, 82:518-529

[73]

Mindell JA, Grigorieff N. Accurate determination of local defocus and specimen tilt in electron microscopy. J. Struct. Biol., 2003, 142:334-347

[74]

Tang G et al. EMAN2: an extensible image processing suite for electron microscopy. J. Struct. Biol., 2007, 157:38-46

[75]

Scheres SH. RELION: implementation of a Bayesian approach to cryo-EM structure determination. J. Struct. Biol., 2012, 180:519-530

[76]

Waterhouse A et al. SWISS-MODEL: homology modelling of protein structures and complexes. Nucleic Acids Res., 2018, 46:W296-W303

[77]

Pettersen EF et al. UCSF Chimera–a visualization system for exploratory research and analysis. J. Comput. Chem., 2004, 25:1605-1612

[78]

Song Y et al. High-resolution comparative modeling with RosettaCM. Structure, 2013, 21:1735-1742

[79]

Emsley P, Lohkamp B, Scott WG, Cowtan K. Features and development of Coot. Acta Crystallogr. Sect. D., Biol. Crystallogr., 2010, 66:486-501

[80]

Phenix CP et al. Imaging of enzyme replacement therapy using PET. Proc. Natl Acad. Sci. USA, 2010, 107:10842-10847

[81]

Chen VB et al. MolProbity: all-atom structure validation for macromolecular crystallography. Acta Crystallogr. Sect. D., Biol. Crystallogr., 2010, 66:12-21

[82]

Spatz JM et al. The Wnt inhibitor sclerostin is up-regulated by mechanical unloading in osteocytes in vitro. J. Biol. Chem., 2015, 290:16744-16758

[83]

Bairoch A. The cellosaurus, a cell-line knowledge resource. J. Biomol. Tech., 2018, 29:25-38

[84]

Uphoff CC, Drexler HG. Detection of mycoplasma contamination in cell cultures. Curr. Protoc. Mol. Biol., 2014, 106:28 24 21-14

[85]

Chu J et al. Non-invasive intravital imaging of cellular differentiation with a bright red-excitable fluorescent protein. Nat. Methods, 2014, 11:572-578

[86]

Kelley LA, Mezulis S, Yates CM, Wass MN, Sternberg MJ. The Phyre2 web portal for protein modeling, prediction and analysis. Nat. Protoc., 2015, 10:845-858

[87]

Corpet F. Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res., 1988, 16:10881-10890

Funding

U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS)(114666)

AI Summary AI Mindmap
PDF

125

Accesses

0

Citation

Detail

Sections
Recommended

AI思维导图

/