Beyond one-size-fits-all: tailoring engineered biochar for purpose-specific rhizosphere engineering in crop production, protection, and soil remediation
Adnan Mustafa , Qudsia Saeed , Xiankai Lu , Zia Ur Rahman Farooqi , Usman Arshad , Jiri Holatko , Wentao Wei , Mohsin Mahmood , Martin Brtnicky , Weibin Chen , Ansa Rebi , Muhammad Amjad Ali , Muhammad Naveed , Jiri Kucerik , Abdul Ghafoor
Biochar ›› 2026, Vol. 8 ›› Issue (1) : 3
Beyond one-size-fits-all: tailoring engineered biochar for purpose-specific rhizosphere engineering in crop production, protection, and soil remediation
Engineered biochar has emerged as a versatile tool for purpose-specific rhizosphere engineering, offering tailored solutions for enhancing crop production, crop protection, and environmental remediation. Yet, its effectiveness depends on optimizing application for specific functional goals rather than adopting a one-size-fits-all approach. This review explores how engineered biochar shapes rhizosphere processes to support crop production, crop protection, and soil remediation. It examines key mechanisms including enhanced nutrient availability, stimulation of beneficial microbial communities, pathogen suppression, and soil contaminant immobilization, and how different biochar modifications, such as nutrient enrichment, antimicrobial functionalization, and surface engineering, drive these outcomes. The review highlights important trade-offs, such as the competing demands of nutrient availability for crop growth versus contaminant immobilization for remediation, and accounts for the spatial and temporal variability of biochar effects in the rhizosphere. While biochar presents clear synergistic benefits (e.g., improving soil structure, enhancing water retention, reducing greenhouse gas emissions, and enabling carbon sequestration), its practical application faces challenges related to competing objectives, rhizosphere complexity, and economic constraints. Emerging innovations such as nanocomposite biochars, bioprimed biochars, and biochar-microbe synergies offer new avenues for precision agriculture and sustainable land management. Finally, the review emphasizes the importance of long-term field studies to evaluate sustainability, and outlines opportunities for biochar in climate change mitigation, waste valorization, and agroecological resilience. By integrating the latest research on biochar’s mechanisms, challenges, and opportunities, this review provides a comprehensive framework for leveraging engineered biochar to address the pressing challenges of modern agriculture and environmental management.
Engineered biochar / Rhizosphere engineering / Microbial communities / Pathogen suppression / Biochar challenges / Innovative biochar applications
| [1] |
Abdellatef MA, Elagamey E, Kamel SM (2022) Chitosan is the ideal resource for plant disease management under sustainable agriculture. InChitin and Chitosan-isolation, properties, and applications IntechOpen https://doi.org/10.5772/intechopen.107958 |
| [2] |
|
| [3] |
|
| [4] |
Ahmad CA, Akhter A, Haider MS, Abbas MT, Hashem A, Avila-Quezada GD, Abd Allah EF (2024) Demonstration of the synergistic effect of biochar and Trichoderma harzianum on the development of Ralstonia solanacearum in eggplant. Front Microbiol 15:1360703 |
| [5] |
|
| [6] |
|
| [7] |
|
| [8] |
|
| [9] |
|
| [10] |
|
| [11] |
|
| [12] |
|
| [13] |
|
| [14] |
|
| [15] |
|
| [16] |
|
| [17] |
Al Masud MA, Annamalai S, Shin WS (2023) Remediation of ciprofloxacin in soil using peroxymonosulfate activated by ball-milled seaweed kelp biochar: performance, mechanism, and phytotoxicity. Chem Eng J 465:142908 |
| [18] |
|
| [19] |
|
| [20] |
|
| [21] |
|
| [22] |
|
| [23] |
|
| [24] |
|
| [25] |
|
| [26] |
|
| [27] |
|
| [28] |
|
| [29] |
|
| [30] |
|
| [31] |
|
| [32] |
|
| [33] |
|
| [34] |
|
| [35] |
|
| [36] |
|
| [37] |
|
| [38] |
|
| [39] |
|
| [40] |
|
| [41] |
|
| [42] |
|
| [43] |
|
| [44] |
|
| [45] |
|
| [46] |
|
| [47] |
|
| [48] |
|
| [49] |
|
| [50] |
|
| [51] |
|
| [52] |
|
| [53] |
|
| [54] |
|
| [55] |
|
| [56] |
|
| [57] |
|
| [58] |
|
| [59] |
|
| [60] |
|
| [61] |
|
| [62] |
|
| [63] |
|
| [64] |
|
| [65] |
|
| [66] |
|
| [67] |
|
| [68] |
|
| [69] |
|
| [70] |
|
| [71] |
|
| [72] |
|
| [73] |
|
| [74] |
|
| [75] |
|
| [76] |
|
| [77] |
|
| [78] |
|
| [79] |
Dai L, Chen Y, Liu L, Sun P, Liu J, Wang B, Yang S (2022) Effect of biochar on the uptake, translocation and phytotoxicity of chromium in a soil-barley pot system. Sci Total Environ 826:153905 |
| [80] |
|
| [81] |
|
| [82] |
|
| [83] |
|
| [84] |
|
| [85] |
|
| [86] |
|
| [87] |
|
| [88] |
|
| [89] |
|
| [90] |
|
| [91] |
|
| [92] |
|
| [93] |
|
| [94] |
|
| [95] |
|
| [96] |
|
| [97] |
|
| [98] |
|
| [99] |
|
| [100] |
|
| [101] |
|
| [102] |
|
| [103] |
|
| [104] |
Ferdous Z (2024) The effect of cattle slurry-activated biochar on earthworm community on arable soil in Southern Finland, Faculty of Biological and Environmental Sciences. University of Helsinki, Helsinki, Finland, p. 53 |
| [105] |
|
| [106] |
|
| [107] |
|
| [108] |
|
| [109] |
|
| [110] |
|
| [111] |
|
| [112] |
|
| [113] |
|
| [114] |
|
| [115] |
|
| [116] |
|
| [117] |
|
| [118] |
|
| [119] |
|
| [120] |
|
| [121] |
|
| [122] |
|
| [123] |
|
| [124] |
|
| [125] |
|
| [126] |
|
| [127] |
|
| [128] |
|
| [129] |
Harussani MM, Sapuan SM (2024) Carbonization of Biomass and Waste into Biosourced Carbon (BC) Nanofillers for Advanced Composite Applications. EmergSust Renew Comp (pp. 248–292). CRC Press |
| [130] |
|
| [131] |
|
| [132] |
|
| [133] |
|
| [134] |
|
| [135] |
|
| [136] |
|
| [137] |
|
| [138] |
|
| [139] |
|
| [140] |
|
| [141] |
|
| [142] |
|
| [143] |
|
| [144] |
|
| [145] |
|
| [146] |
|
| [147] |
|
| [148] |
|
| [149] |
|
| [150] |
|
| [151] |
|
| [152] |
|
| [153] |
|
| [154] |
|
| [155] |
|
| [156] |
|
| [157] |
|
| [158] |
|
| [159] |
Kammann C, Graber ER (2015) Biochar effects on plant ecophysiology. In Biochar for environmental management (pp. 391–419). Routledge |
| [160] |
|
| [161] |
|
| [162] |
|
| [163] |
|
| [164] |
|
| [165] |
|
| [166] |
|
| [167] |
|
| [168] |
|
| [169] |
|
| [170] |
|
| [171] |
|
| [172] |
|
| [173] |
|
| [174] |
|
| [175] |
|
| [176] |
|
| [177] |
|
| [178] |
|
| [179] |
|
| [180] |
|
| [181] |
|
| [182] |
|
| [183] |
|
| [184] |
|
| [185] |
|
| [186] |
|
| [187] |
|
| [188] |
|
| [189] |
|
| [190] |
|
| [191] |
|
| [192] |
|
| [193] |
|
| [194] |
|
| [195] |
|
| [196] |
|
| [197] |
|
| [198] |
|
| [199] |
|
| [200] |
|
| [201] |
|
| [202] |
|
| [203] |
|
| [204] |
|
| [205] |
|
| [206] |
|
| [207] |
|
| [208] |
|
| [209] |
Luthra N, Pathak SO, Tater A, Tewari S, Nain P, Sharma R, Kushwaha DP, Bhatt MK, Singh SK, Kaushal A (2024) Role of biochar in acidic soils amelioration. In: Biochar production for green economy (pp. 185–203). Academic Press |
| [210] |
|
| [211] |
|
| [212] |
|
| [213] |
|
| [214] |
|
| [215] |
|
| [216] |
|
| [217] |
Manso E (2017) Biochar as A liming agent and phosphorus source to enhance the growth of soya bean in two acid soils. University of Ghana: Doctoral dissertation |
| [218] |
|
| [219] |
|
| [220] |
|
| [221] |
Mihoub A, Amin AEEAZ, Motaghian HR, Saeed MF, Naeem A. (2022) Citric acid (CA)–modified biochar improved available phosphorus concentration and its half-life in a P-fertilized calcareous sandy soil. J. Soil Sci Plant Nutr, pp 1–10 |
| [222] |
|
| [223] |
Meyer S, Glaser B, Quicker P (2011) Technical, economical, and climate-related aspects of biochar production technologies: a literature review. Environ Sci Technol 45(22):9473-9483 |
| [224] |
|
| [225] |
|
| [226] |
|
| [227] |
Moradi N, Karimi A (2021) Fe-modified common reed biochar reduced cadmium (Cd) mobility and enhanced microbial activity in a contaminated calcareous soil. J Soil Sci Plant Nutr. 21(1):329–340 |
| [228] |
|
| [229] |
|
| [230] |
|
| [231] |
|
| [232] |
|
| [233] |
Murtaza G, Ahmed Z, Iqbal R, Deng G (2025) Biochar from agricultural waste as a strategic resource for promotion of crop growth and nutrient cycling of soil under drought and salinity stress conditions: a comprehensive review with context of climate change. J Plant Nutr, pp 1–52 |
| [234] |
|
| [235] |
|
| [236] |
|
| [237] |
|
| [238] |
|
| [239] |
|
| [240] |
|
| [241] |
|
| [242] |
Neuberger P, Romero C, Kim K, Hao X, A. McAllister T, Ngo S, et al. Biochar is colonized by select arbuscular mycorrhizal fungi in agricultural soils. Mycorrhiza. 2024;34(3):191–201. https://doi.org/10.1007/s00572-024-01149-5 |
| [243] |
|
| [244] |
|
| [245] |
|
| [246] |
|
| [247] |
|
| [248] |
|
| [249] |
|
| [250] |
|
| [251] |
|
| [252] |
|
| [253] |
Pantoja-Guerra M, Burkett-Cadena M, Cadena J, Dunlap CA, Ramírez CA (2023) Lysinibacillus spp.: an IAA-producing endospore forming-bacteria that promotes plant growth. Antonie van Leeuwenhoek. 116(7):615–630 |
| [254] |
|
| [255] |
|
| [256] |
|
| [257] |
|
| [258] |
|
| [259] |
|
| [260] |
|
| [261] |
|
| [262] |
|
| [263] |
|
| [264] |
|
| [265] |
|
| [266] |
Poveda J, Martínez-Gómez Á, Fenoll C, Escobar C (2021) The use of biochar for plant pathogen control. Phytopathology®, 111(9), pp.1490–1499 |
| [267] |
|
| [268] |
Puga AP, Grutzmacher P, Cerri CEP, Ribeirinho VS, Andrade CAD (2020) Biochar-based nitrogen fertilizers: greenhouse gas emissions, use efficiency, and maize yield in tropical soils. Sci Total Environ 704:135375 |
| [269] |
|
| [270] |
|
| [271] |
|
| [272] |
|
| [273] |
|
| [274] |
|
| [275] |
|
| [276] |
|
| [277] |
Ramezani M, Ramezani F, Gerami M (2019) Nanoparticles in pest incidences and plant disease control. Nanotech agri: crop prod prot Springer, Singapore |
| [278] |
Ramadan MM, Abd-Elsalam KA (2020) Micro/nano biochar for sustainable plant health: present status and future prospects. Carbon nanomaterials for agri-food and environmental applications, pp 323–357 |
| [279] |
Rasool M, Akhter A, Soja G, Haider MS (2021) Role of biochar, compost and plant growth promoting rhizobacteria in the management of tomato early blight disease. Sci Rep 11(1):6092 |
| [280] |
|
| [281] |
|
| [282] |
|
| [283] |
|
| [284] |
|
| [285] |
|
| [286] |
|
| [287] |
|
| [288] |
|
| [289] |
|
| [290] |
|
| [291] |
|
| [292] |
|
| [293] |
|
| [294] |
|
| [295] |
|
| [296] |
|
| [297] |
|
| [298] |
Sarma H, Shyam S, Zhang M, Guerriero G (2024) Nano-biochar interactions within the rhizosphere and their implications for plant-soil dynamics. Soil Environ Health, p 100095 |
| [299] |
Saudy HS, Hamed MF, El-Metwally IM, Ramadan KA, Aisa KH (2021) Assessing the effect of biochar or compost application as a spot placement on broomrape control in two cultivars of faba bean. J Soil Sci Plant Nut 21:1856–66 |
| [300] |
Schmidt HP, Bucheli T, Kammann C, Glaser B, Abiven S, Leifeld J (2016) European biochar certificate-guidelines for a sustainable production of biochar |
| [301] |
|
| [302] |
|
| [303] |
|
| [304] |
|
| [305] |
Sharma P, Sharma MM, Malik A, Vashisth M, Singh D, Kumar R, Singh B, Patra A, Mehta S, Pandey V (2021) Rhizosphere, rhizosphere biology, and rhizospheric engineering. InPlant growth-promoting microbes for sustainable biotic and abiotic stress management (pp. 577–624). Cham: Springer International Publishing |
| [306] |
|
| [307] |
|
| [308] |
|
| [309] |
|
| [310] |
|
| [311] |
|
| [312] |
|
| [313] |
|
| [314] |
|
| [315] |
|
| [316] |
|
| [317] |
|
| [318] |
|
| [319] |
|
| [320] |
|
| [321] |
|
| [322] |
|
| [323] |
|
| [324] |
|
| [325] |
|
| [326] |
|
| [327] |
Thies JE, Rillig MC, Graber ER (2015) Biochar effects on the abundance, activity and diversity of the soil biota. In Bio env manag (pp. 327–389). Routledge |
| [328] |
|
| [329] |
|
| [330] |
|
| [331] |
|
| [332] |
Tsang, D.C. and Ok, Y.S. eds., 2022. Biochar in agriculture for achieving sustainable development goals. Academic Press |
| [333] |
|
| [334] |
|
| [335] |
UN-Water, 2020. UN-Water Analytical Brief on Unconventional Water Resources, United Nations |
| [336] |
|
| [337] |
|
| [338] |
|
| [339] |
Wachira RW (2020) Effect of soil amendment with biochar, lime and compost on soil acidity and root rot in common bean Phasoelus Vulgaris L. In Western Kenya (Doctoral dissertation, University of Nairobi) http://erepository.uonbi.ac.ke/handle/11295/154754 |
| [340] |
|
| [341] |
|
| [342] |
|
| [343] |
|
| [344] |
|
| [345] |
|
| [346] |
Wang J, Shi D, Huang C, Zhai B, Feng S (2023) Effects of common biochar and acid-modified biochar on growth and quality of spinach in coastal saline soils. Plants (Basel) 12(18) |
| [347] |
|
| [348] |
|
| [349] |
|
| [350] |
|
| [351] |
|
| [352] |
|
| [353] |
|
| [354] |
|
| [355] |
|
| [356] |
|
| [357] |
|
| [358] |
|
| [359] |
|
| [360] |
|
| [361] |
|
| [362] |
|
| [363] |
|
| [364] |
|
| [365] |
|
| [366] |
|
| [367] |
|
| [368] |
Yakout SM, Daifullah AEHM, El-Reefy SA (2015) Pore structure characterization of chemically modified biochar derived from rice straw. Environ Eng Manag J 14(2) |
| [369] |
|
| [370] |
Yang H, Kerner P, Liang X, Struhs E, Mirkouei A, You Y (2024) Biochar modulates wheat root metabolome and rhizosphere microbiome in a feedstock-dependent manner. bioRxiv 07 |
| [371] |
|
| [372] |
|
| [373] |
|
| [374] |
|
| [375] |
|
| [376] |
|
| [377] |
|
| [378] |
Ye J, Zhang R, Nielsen S, Joseph SD, Huang D, Thomas T (2016) A combination of biochar–mineral complexes and compost improves soil bacterial processes, soil quality, and plant properties. Front Microbiol 7:372 |
| [379] |
|
| [380] |
|
| [381] |
|
| [382] |
|
| [383] |
|
| [384] |
|
| [385] |
|
| [386] |
|
| [387] |
|
| [388] |
|
| [389] |
|
| [390] |
|
| [391] |
|
| [392] |
|
| [393] |
|
| [394] |
|
| [395] |
|
| [396] |
|
| [397] |
|
| [398] |
|
| [399] |
|
| [400] |
|
| [401] |
|
| [402] |
|
| [403] |
|
| [404] |
|
| [405] |
|
| [406] |
|
The Author(s)
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