Sustainable β-carotene production by engineered S. cerevisiae using sucrose and agricultural by-products
Suriyaporn Bubphasawan , Kitisak Sansatchanon , Peerada Promdonkoy , Akaraphol Watcharawipas , Sutipa Tanapongpipat , Peerapat Khamwachirapithak , Weerawat Runguphan , Kanokarn Kocharin
Bioresources and Bioprocessing ›› 2025, Vol. 12 ›› Issue (1)
Sustainable β-carotene production by engineered S. cerevisiae using sucrose and agricultural by-products
β-carotene, a carotenoid precursor to vitamin A, is widely employed in the food, pharmaceutical, and nutraceutical sectors. In this study, we present an economically sustainable strategy for β-carotene biosynthesis in Saccharomyces cerevisiae by engineering the yeast to utilize sucrose and agricultural by-products as alternative carbon and nitrogen sources. Specifically, the deletion of the GAL80 gene facilitated effective β-carotene synthesis directly from sucrose, circumventing the costly requirement for galactose induction. Using this engineered yeast strain, we achieved β-carotene titers of up to 23.30 ± 4.22 mg/L and content levels of 2.29 ± 0.16 mg/g dry cell weight (DCW). To further improve the economic viability and environmental sustainability, we evaluated the use of agricultural by-products—molasses as a carbon source and fish meal as a nitrogen source—in a fed-batch fermentation process, highlighting the potential of these substrates to replace refined feedstocks while achieving competitive β-carotene production levels. This approach yielded substantial β-carotene titers of 17.02 ± 0.40 mg/L and content levels of 2.90 ± 0.21 mg/g DCW. It also significantly reduced medium costs by up to 73% compared to conventional yeast extract and peptone-based media, demonstrating the practical potential of these low-cost, sustainable substrates for industrial applications. This study uniquely highlights the successful application of unrefined agricultural by-products, addressing key challenges in cost and sustainability. These findings represent an important advancement toward developing economically competitive and environmentally responsible microbial platforms for the production of β-carotene and other high-value biochemicals.
Carotenoids / Β-carotene / Yeast / Agricultural wastes / Bioprocess development
| [1] |
|
| [2] |
|
| [3] |
|
| [4] |
|
| [5] |
Bogacz-Radomska L, Harasym J, Piwowar A (2020) Commercialization aspects of carotenoids. Carotenoids: Prop Process Appl 327–357. https://doi.org/10.1016/B978-0-12-817067-0.00010-5 |
| [6] |
|
| [7] |
|
| [8] |
|
| [9] |
|
| [10] |
|
| [11] |
Fathi Z, Tramontin LRR, Ebrahimipour G et al (2021) Metabolic engineering of Saccharomyces cerevisiae for production of β-carotene from hydrophobic substrates. FEMS Yeast Res 21. https://doi.org/10.1093/FEMSYR/FOAA068 |
| [12] |
|
| [13] |
|
| [14] |
|
| [15] |
|
| [16] |
Guo Q, Peng QQ, Li YW et al (2023) Advances in the metabolic engineering of Saccharomyces cerevisiae and Yarrowia lipolytica for the production. https://doi.org/10.1080/07388551.2023.2166809. of β-carotenehttps://doi.org/101080/0738855120232166809 |
| [17] |
|
| [18] |
|
| [19] |
|
| [20] |
|
| [21] |
|
| [22] |
|
| [23] |
Liu L, Kong F (2020) Measuring chemical deterioration of foods. Chemical Changes During Processing and Storage of Foods: Implications for Food Quality and Human Health 637–679. https://doi.org/10.1016/B978-0-12-817380-0.00013-0 |
| [24] |
López J, Cataldo VF, Peña M et al (2019) Build your bioprocess on a solid strain-β-carotene production in Recombinant Saccharomyces cerevisiae. Front Bioeng Biotechnol 7. https://doi.org/10.3389/FBIOE.2019.00171 |
| [25] |
Lopez-Arenas T, Anaya-Reza O, Perez-Cisneros ES, Sales-Cruz M (2022) Conceptual design of sugarcane biorefinery upgrading molasses to value-added chemicals. A-Z Biorefinery: Compr View 683–712. https://doi.org/10.1016/B978-0-12-819248-1.00003-8 |
| [26] |
|
| [27] |
|
| [28] |
|
| [29] |
|
| [30] |
|
| [31] |
|
| [32] |
|
| [33] |
Sowcharoensuk C (2023) THAILAND INDUSTRY OUTLOOK 2023-25 Krungsri Research |
| [34] |
|
| [35] |
|
| [36] |
|
| [37] |
|
| [38] |
Verwaal R, Jiang Y, Wang J, Daran JM, Sandmann G, van den BergJA, van Ooyen AJ (2010) Heterologous carotenoid production in Saccharomyces cerevisiae induces thepleiotropic drug resistance stress response. Yeast 27(12):983–98. https://doi.org/10.1002/yea.1807 |
| [39] |
|
| [40] |
Watcharawipas A, Runguphan W (2023) Red yeasts and their carotenogenic enzymes for microbial carotenoid production. FEMS Yeast Res 23. https://doi.org/10.1093/FEMSYR/FOAC063 |
| [41] |
Watcharawipas A, Sansatchanon K, Phithakrotchanakoon C et al (2021) Novel carotenogenic gene combinations from red yeasts enhanced lycopene and beta-carotene production in Saccharomyces cerevisiae from the low-cost substrate sucrose. FEMS Yeast Res 21. https://doi.org/10.1093/FEMSYR/FOAB062 |
| [42] |
Weinhandl K, Winkler M, Glieder A, Camattari A (2014) Carbon source dependent promoters in yeasts. Microb Cell Fact 13. https://doi.org/10.1186/1475-2859-13-5 |
| [43] |
|
| [44] |
|
The Author(s)
/
| 〈 |
|
〉 |