A facile and robust T7-promoter-based high-expression of heterologous proteins in Bacillus subtilis

Jing Ye , Yunjie Li , Yuqing Bai , Ting Zhang , Wei Jiang , Ting Shi , Zijian Wu , Yi-Heng P. Job Zhang

Bioresources and Bioprocessing ›› 2022, Vol. 9 ›› Issue (1) : 56

PDF
Bioresources and Bioprocessing ›› 2022, Vol. 9 ›› Issue (1) : 56 DOI: 10.1186/s40643-022-00540-4
Research

A facile and robust T7-promoter-based high-expression of heterologous proteins in Bacillus subtilis

Author information +
History +
PDF

Abstract

To mimic the Escherichia coli T7 protein expression system, we developed a facile T7 promoter-based protein expression system in an industrial microorganism Bacillus subtilis. This system has two parts: a new B. subtilis strain SCK22 and a plasmid pHT7. To construct strain SCK22, the T7 RNA polymerase gene was inserted into the chromosome, and several genes, such as two major protease genes, a spore generation-related gene, and a fermentation foam generation-related gene, were knocked out to facilitate good expression in high-density cell fermentation. The gene of a target protein can be subcloned into plasmid pHT7, where the gene of the target protein was under tight control of the T7 promoter with a ribosome binding site (RBS) sequence of B. subtilis (i.e., AAGGAGG). A few recombinant proteins (i.e., green fluorescent protein, α-glucan phosphorylase, inositol monophosphatase, phosphoglucomutase, and 4-α-glucanotransferase) were expressed with approximately 25–40% expression levels relative to the cellular total proteins estimated by SDS-PAGE by using B. subtilis SCK22/pHT7-derived plasmid. A fed-batch high-cell density fermentation was conducted in a 5-L fermenter, producing up to 4.78 g/L inositol monophosphatase. This expression system has a few advantageous features, such as, wide applicability for recombinant proteins, high protein expression level, easy genetic operation, high transformation efficiency, good genetic stability, and suitability for high-cell density fermentation.

Keywords

Bacillus subtilis / T7 expression system / Recombinant protein expression / High cell-density fermentation

Cite this article

Download citation ▾
Jing Ye, Yunjie Li, Yuqing Bai, Ting Zhang, Wei Jiang, Ting Shi, Zijian Wu, Yi-Heng P. Job Zhang. A facile and robust T7-promoter-based high-expression of heterologous proteins in Bacillus subtilis. Bioresources and Bioprocessing, 2022, 9(1): 56 DOI:10.1186/s40643-022-00540-4

登录浏览全文

4963

注册一个新账户 忘记密码

References

[1]

Barnard GC, Henderson GE, Srinivasan S, Gerngross TU. High level recombinant protein expression in Ralstonia eutropha using T7 RNA polymerase based amplification. Protein Expr Purif, 2004, 38: 264-271.

[2]

Bhavsar AP, Zhao X, Brown ED. Development and characterization of a xylose-dependent system for expression of cloned genes in Bacillus subtilis: conditional complementation of a teichoic acid mutant. Appl Environ Microbiol, 2001, 67: 403-410.

[3]

Bongers RS, Veening JW, Van Wieringen M, Kuipers OP, Kleerebezem M. Development and characterization of a subtilin-regulated expression system in Bacillus subtilis: strict control of gene expression by addition of subtilin. Appl Environ Microbiol, 2005, 71: 8818-8824.

[4]

Castillo-Hair SM, Fujita M, Igoshin OA, Tabor JJ. An engineered B. subtilis inducible promoter system with over 10000-fold dynamic range. ACS Synth Biol, 2019, 8: 1673-1678.

[5]

Chen J, Fu G, Gai Y, Zheng P, Zhang D, Wen J. Combinatorial Sec pathway analysis for improved heterologous protein secretion in Bacillus subtilis: identification of bottlenecks by systematic gene overexpression. Microb Cell Fact, 2015, 14: 92.

[6]

Chen PT, Shaw JF, Chao YP, David Ho TH, Yu SM. Construction of chromosomally located T7 expression system for production of heterologous secreted proteins in Bacillus subtilis. J Agric Food Chem, 2010, 58: 5392-5399.

[7]

Conrad B, Savchenko RS, Breves R, Hofemeister J. A T7 promoter-specific, inducible protein expression system for Bacillus subtilis. Mol Gen Genet, 1996, 250: 230-236.

[8]

Davison J, Chevalier N, Brunel F. Bacteriophage T7 RNA polymerase-controlled specific gene expression in Pseudomonas. Gene, 1989, 83: 371-375.

[9]

Dong H, Zhang D. Current development in genetic engineering strategies of Bacillus species. Microb Cell Fact, 2014, 13: 63.

[10]

Dong YZ, Chang WS, Chen PT. Characterization and overexpression of a novel keratinase from Bacillus polyfermenticus B4 in recombinant Bacillus subtilis. Bioresour Bioprocess, 2017, 4: 47.

[11]

Drepper T, Arvani S, Rosenau F, Wilhelm S, Jaeger KE. High-level transcription of large gene regions: a novel T(7) RNA-polymerase-based system for expression of functional hydrogenases in the phototrophic bacterium Rhodobacter capsulatus. Biochem Soc Trans, 2005, 33: 56-58.

[12]

Duan X, Zhang X, Shen Z, Su E, Zhao L, Pei J. Efficient production of aggregation prone 4-alpha-glucanotransferase by combined use of molecular chaperones and chemical chaperones in Escherichia coli. J Biotechnol, 2019, 292: 68-75.

[13]

Gamer M, Frode D, Biedendieck R, Stammen S, Jahn D. A T7 RNA polymerase-dependent gene expression system for Bacillus megaterium. Appl Microbiol Biotechnol, 2009, 82: 1195-1203.

[14]

Guerout-Fleury AM, Frandsen N, Stragier P. Plasmids for ectopic integration in Bacillus subtilis. Gene, 1996, 180: 57-61.

[15]

Harwood CR, Wipat A, Prágai Z. Functional analysis of the Bacillus subtilis genome. Method Microbiol, 2002, 33: 337-367.

[16]

Helianti I, Ulfah M, Nurhayati N, Suhendar D, Finalissari AK, Wardani AK. Production of xylanase by recombinant Bacillus subtilis DB104 cultivated in agroindustrial waste medium. HAYATI J Biosci, 2016, 23: 125-131.

[17]

Higgins D, Dworkin J. Recent progress in Bacillus subtilis sporulation. FEMS Microbiol Rev, 2012, 36: 131-148.

[18]

Ji MH, Li SJ, Chen A, Liu YH, Xie YK, Duan HY, Shi JP, Sun JS. A wheat bran inducible expression system for the efficient production of alpha-L-arabinofuranosidase in Bacillus subtilis. Enzyme Microb Technol, 2021, 144.

[19]

Kawamura F, Doi RH. Construction of a Bacillus subtilis double mutant deficient in extracellular alkaline and neutral proteases. J Bacteriol, 1984, 160: 442-444.

[20]

Kim L, Mogk A, Schumann W. A xylose-inducible Bacillus subtilis integration vector and its application. Gene, 1996, 181: 71-76.

[21]

Lu YP, Lin Q, Wang J, Wu YF, Bao WYDL, Lv FX, Lu ZX. Overexpression and characterization in Bacillus subtilis of a positionally nonspecific lipase from Proteus vulgaris. J Ind Microbiol Biotechnol, 2010, 37: 919-925.

[22]

Lussier FX, Denis F, Shareck F. Adaptation of the highly productive T7 expression system to Streptomyces lividans. Appl Environ Microbiol, 2010, 76: 967-970.

[23]

Mironczuk AM, Kovacs AT, Kuipers OP. Induction of natural competence in Bacillus cereus ATCC14579. Microb Biotechnol, 2008, 1: 226-235.

[24]

Moffatt BA, Studier FW. T7 lysozyme inhibits transcription by T7 RNA polymerase. Cell, 1987, 49: 221-227.

[25]

Morimoto T, Kadoya R, Endo K, Tohata M, Sawada K, Liu S, Ozawa T, Kodama T, Kakeshita H, Kageyama Y, Manabe K, Kanaya S, Ara K, Ozaki K, Ogasawara N. Enhanced recombinant protein productivity by genome reduction in Bacillus subtilis. DNA Res, 2008, 15: 73-81.

[26]

Nguyen HD, Phan TT, Schumann W. Expression vectors for the rapid purification of recombinant proteins in Bacillus subtilis. Curr Microbiol, 2007, 55: 89-93.

[27]

Niu CT, Liu CF, Li YX, Zheng FY, Wang JJ, Li Q. Production of a thermostable 1,3–1,4-beta-glucanase mutant in Bacillus subtilis WB600 at a high fermentation capacity and its potential application in the brewing industry. Int J Biol Macromol, 2018, 107: 28-34.

[28]

Peypoux F, Bonmatin JM, Wallach J. Recent trends in the biochemistry of surfactin. Appl Microbiol Biotechnol, 1999, 51: 553-563.

[29]

Phan TT, Nguyen HD, Schumann W. Development of a strong intracellular expression system for Bacillus subtilis by optimizing promoter elements. J Biotechnol, 2012, 157: 167-172.

[30]

Phan TT, Nguyen HD, Schumann W. Novel plasmid-based expression vectors for intra- and extracellular production of recombinant proteins in Bacillus subtilis. Protein Expr Purif, 2006, 46: 189-195.

[31]

Phan TT, Schumann W. Development of a glycine-inducible expression system for Bacillus subtilis. J Biotechnol, 2007, 128: 486-499.

[32]

Rashid R, Sohail M. Xylanolytic Bacillus species for xylooligosaccharides production: a critical review. Bioresour Bioprocess, 2021, 8: 16.

[33]

Rosenberg AH, Lade BN, Chui DS, Lin SW, Dunn JJ, Studier FW. Vectors for selective expression of cloned DNAs by T7 RNA polymerase. Gene, 1987, 56: 125-135.

[34]

Schallmey M, Singh A, Ward OP. Developments in the use of Bacillus species for industrial production. Can J Microbiol, 2004, 50: 1-17.

[35]

Shi T, Wang GL, Wang ZW, Fu J, Chen T, Zhao XM. Establishment of a markerless mutation delivery system in Bacillus subtilis stimulated by a double-strand break in the chromosome. PLoS ONE, 2013, 8: e81370.

[36]

Terpe K. Overview of bacterial expression systems for heterologous protein production: from molecular and biochemical fundamentals to commercial systems. Appl Microbiol Biotechnol, 2006, 72: 211-222.

[37]

Ting WW, Tan SI, Ng IS. Development of chromosome-based T7 RNA polymerase and orthogonal T7 promoter circuit in Escherichia coli W3110 as a cell factory. Bioresour Bioprocess, 2020, 7: 54.

[38]

Tran DTM, Phan TTP, Doan TTN, Tran TL, Schumann W, Nguyen HD. Integrative expression vectors with Pgrac promoters for inducer-free overproduction of recombinant proteins in Bacillus subtilis. Biotechnol Rep, 2020, 28: e00540.

[39]

Wells JM, Wilson PW, Norton PM, Le Page RW. A model system for the investigation of heterologous protein secretion pathways in Lactococcus lactis. Appl Environ Microbiol, 1993, 59: 3954-3959.

[40]

Wenzel M, Muller A, Siemann-Herzberg M, Altenbuchner J. Self-inducible Bacillus subtilis expression system for reliable and inexpensive protein production by high-cell-density fermentation. Appl Environ Microbiol, 2011, 77: 6419-6425.

[41]

Wu FY, Ma JY, Cha YP, Lu DL, Li ZW, Zhuo M, Luo XC, Li S, Zhu MJ. Using inexpensive substrate to achieve high-level lipase A secretion by Bacillus subtilis through signal peptide and promoter screening. Process Biochem, 2020, 99: 202-210.

[42]

Yang MM, Zhang WW, Zhang XF, Cen PL. Construction and characterization of a novel maltose inducible expression vector in Bacillus subtilis. Biotechnol Lett, 2006, 28: 1713-1718.

[43]

Yansura DG, Henner DJ. Use of the Escherichia-coli lac repressor and operator to control gene-expression in Bacillus subtilis. PNAS, 1984, 81: 439-443.

[44]

Yi YC, Ng IS. Redirection of metabolic flux in Shewanella oneidensis MR-1 by CRISPRi and modular design for 5-aminolevulinic acid production. Bioresour Bioprocess, 2021, 8: 13.

[45]

You C, Shi T, Li YJ, Han PP, Zhou XG, Zhang Y-HP. An in vitro synthetic biology platform for the industrial biomanufacturing of myo-inositol from starch. Biotechnol Bioeng, 2017, 114: 1855-1864.

[46]

You C, Zhang XZ, Zhang Y-HP. Simple cloning via direct transformation of PCR product (DNA Multimer) to Escherichia coli and Bacillus subtilis. Appl Environ Microbiol, 2012, 78: 1593-1595.

[47]

Yue J, Fu G, Zhang DW, Wen JP. A new maltose-inducible high-performance heterologous expression system in Bacillus subtilis. Biotechnol Lett, 2017, 39: 1237-1244.

[48]

Zhang K, Duan X, Wu J. Multigene disruption in undomesticated Bacillus subtilis ATCC 6051a using the CRISPR/Cas9 system. Sci Rep, 2016, 6: 27943.

[49]

Zhang XZ, Zhang Y-HP. Simple, fast and high-efficiency transformation system for directed evolution of cellulase in Bacillus subtilis. Microb Biotechnol, 2011, 4: 98-105.

[50]

Zhou W, You C, Ma H, Ma Y, Zhang Y-HP. One-pot biosynthesis of high-concentration alpha-glucose 1-phosphate from starch by sequential addition of three hyperthermophilic enzymes. J Agric Food Chem, 2016, 64: 1777-1783.

Funding

Tianjin Synthetic Biotechnology Innovation Capacity Improvement Project (TSBICIP-KJGG-003)

AI Summary AI Mindmap
PDF

132

Accesses

0

Citation

Detail

Sections
Recommended

AI思维导图

/