Aerobic bacterial transformation and biodegradation of dioxins: a review

Salametu Saibu , Sunday A. Adebusoye , Ganiyu O. Oyetibo

Bioresources and Bioprocessing ›› 2020, Vol. 7 ›› Issue (1) : 7

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Bioresources and Bioprocessing ›› 2020, Vol. 7 ›› Issue (1) : 7 DOI: 10.1186/s40643-020-0294-0
Review

Aerobic bacterial transformation and biodegradation of dioxins: a review

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Abstract

Waste generation tends to surge in quantum as the population and living conditions grow. A group of structurally related chemicals of dibenzofurans and dibenzo-p-dioxins including their chlorinated congeners collectively known as dioxins are among the most lethal environmental pollutants formed during different anthropogenic activities. Removal of dioxins from the environment is challenging due to their persistence, recalcitrance to biodegradation, and prevalent nature. Dioxin elimination through the biological approach is considered both economically and environmentally as a better substitute to physicochemical conventional approaches. Bacterial aerobic degradation of these compounds is through two major catabolic routes: lateral and angular dioxygenation pathways. Information on the diversity of bacteria with aerobic dioxin degradation capability has accumulated over the years and efforts have been made to harness this fundamental knowledge to cleanup dioxin-polluted soils. This paper covers the previous decades and recent developments on bacterial diversity and aerobic bacterial transformation, degradation, and bioremediation of dioxins in contaminated systems.

Keywords

Dioxin / Aerobic degradation / Bacterial degradation / Sphingomonas wittichii RW1

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Salametu Saibu, Sunday A. Adebusoye, Ganiyu O. Oyetibo. Aerobic bacterial transformation and biodegradation of dioxins: a review. Bioresources and Bioprocessing, 2020, 7(1): 7 DOI:10.1186/s40643-020-0294-0

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References

[1]

Adebusoye SA, Ilori MO, Picardal FW, Amund OO. Extensive biodegradation of polychlorinated biphenyls in Aroclor 1242 and electrical transformer fluid (Askarel) by natural strains of microorganisms indigenous to contaminated African systems. Chemosphere, 2008, 73: 126-132.

[2]

Ali F, Hu H, Wang W, Zhou Z, Shah SB, Xu P, Tang H. Characterization of a dibenzofuran-degrading strain of Pseudomonas aeruginosa, FA-HZ1. Environ Pollut, 2019, 250: 262-273.

[3]

Aly HAH, Huu NB, Wray V, Junca H, Pieper DH. Two angular dioxygenases contribute to the metabolic versatility of dibenzofuran-degrading Rhodococcus sp. strain HA01. Appl Environ Microbiol, 2008, 74: 3812-3822.

[4]

Arfmann H, Timmis KN, Wittich R. Mineralization of 4-chlorodibenzofuran by a consortium consisting of Sphingomonas sp. strain RW1 and Burkholderia sp. strain JWS. Appl Environ Microbiol, 1997, 63: 3458-3462.

[5]

Armengaud J, Timmis KN. Biodegradation of dibenzo-p-dioxins and dibenzofurans by bacteria. J Microbiol, 1997, 4: 241-252.

[6]

Armengaud J, Happe B, Timmis KN. Genetic analysis of dioxin dioxygenase of Sphingomonas sp. strain RW1: catabolic genes dispersed on the genome. J Bacteriol, 1998, 180: 3954-3966.

[7]

Armengaud J, Timmis KN, Wittich RM. A functional 4-hydroxysalicylate/hydroxyquinol degradative pathway gene cluster is linked to the initial dibenzo-p-dioxin pathway genes in Sphingomonas sp. strain RW1. J Bacteriol, 1999, 181: 3452-3461.

[8]

Barkovskii AL, Adriaens P. Microbial dechlorination of historically present and freshly spiked chlorinated dioxins and diversity of dioxin dechlorinating populations. Appl Environ Microbiol, 1996, 62: 4556-4562.

[9]

Becher D, Specht M, Hammer E, Francke W, Schauer F. Cometabolic degradation of dibenzofuran by biphenyl cultivated Ralstonia sp. strain SBUG 290. Appl Environ Microbiol, 2000, 66: 4528-4531.

[10]

Bedard DL. A case study for microbial biodegradation: anaerobic bacterial reductive dechlorination of polychlorinated biphenyls-from sediment to defined medium. Ann Rev Microbiol, 2008, 62: 253-270.

[11]

Bertazzi PA, Bernucci I, Brambilla G, Consonni D, Pesatori AC. The Seveso studies on early and long-term effects of dioxin exposure: a review. Environ Health Perspect, 1998, 106: 625-633.

[12]

Booth S, Hui J, Alojado Z, Lam V, Cheung W, Zeller D, Steyn D, Pauly D. Global deposition of airborne dioxin. Mar Pollut Bull, 2013, 75: 182-186.

[13]

Bunge M, Adrian L, Kraus A, Opel M, Lorenz WG, Andreesen JR, Gorisch H, Lechner U. Reductive dehalogenation of chlorinated dioxins by an anaerobic bacterium. Nature, 2003, 421: 357-360.

[14]

Bunz PV, Cook AM. Dibenzofuran 4,4a-dioxygenase from Sphingomonas sp. strain RW1: angular dioxygenation by a three-component enzyme system. J Bacteriol, 1993, 175: 6467-6475.

[15]

Cerniglia C, Morgan J, Gibson D. Bacterial and fungal oxidation of dibenzofuran. Biochem J, 1979, 180: 175-185.

[16]

Chai B, Tsoi TV, Iwai S, Liu C, Fish JA, Gu C, . Sphingomonas wittichii Strain RW1 Genome-wide gene expression shifts in response to dioxins and clay. PLoS ONE, 2016, 11(6): e0157008.

[17]

Chang YS. Recent developments in microbial biotransformation and biodegradation of dioxins. J Mol Microbiol Biotechnol, 2008, 15: 152-171.

[18]

Chen WY, Wu JH, Chang JE. Pyrosequencing analysis reveals high population dynamics of the soil Microcosm degrading octachlorodibenzofuran. Microbes Environ, 2014, 29: 393-400.

[19]

Chen WY, Wu JH, Lin YY, Huang HJ, Chang JE. Bioremediation potential of soil contaminated with highly substituted polychlorinated dibenzo-p-dioxins and dibenzofurans: Microcosm study and microbial community analysis. J Hazard Mater, 2013, 261: 351-361.

[20]

Chen WY, Wu JH, Lin SC, Chang JE. Bioremediation of polychlorinated-p-dioxins/dibenzofurans contaminated soil using simulated compost-amended landfill reactors under hypoxic conditions. J Hazard Mater, 2016, 312: 159-168.

[21]

Colquhoun DR, Hartmann EM, Halden RU. Proteomic profiling of the dioxin-degrading bacterium Sphingomonas wittichii RW1. J Biomed Biotechnol., 2012, 2012: 408690.

[22]

Consonni D, Angela CP, Carlo Z, Raffaella S, Luca C, D’Oro Maurizia R, Pier AB. Mortality in a population exposed to dioxin after the seveso, italy, accident in 1976: 25 years of follow-up. Am J Epidemiol, 2008, 167: 847-858.

[23]

Coronado E, Roggo C, Johnson DR, van der Meer JR. Genome-wide analysis of salicylate and dibenzofuran metabolism in Sphingomonas wittichii RW1. Front Microbiol, 2012, 3: 300.

[24]

Dopico M, Gómez A. Review of the current state and main sources of dioxins around the world. J Air Waste Manag Assoc, 2015, 65: 1033-1049.

[25]

Erickson BD, Mondello FJ. Nucleotide sequencing and transcriptional mapping of the genes encoding biphenyl dioxygenase, a multicomponent polychlorinated-biphenyl-degrading enzyme in Pseudomonas strain LB400. J Bacteriol, 1992, 174: 2903-2912.

[26]

Fennell DE, Nijenhuis I, Wilson SF, Zinder SH, Haggblom MM. Dehalococcoides ethenogens strain 195 reductively dechlorinate diverse chlorinated aromatic pollutants. Environ Sci Technol, 2004, 38: 2075-2081.

[27]

Field JA, Sierra-Alvarez R. Microbial degradation of chlorinated dioxins. Chemosphere, 2008, 71: 1005-1018.

[28]

Fortnagel P, Harms H, Wittich RM, Francke W, Krohn S, Meyer H. Cleavage of dibenzofuran and dibenzodioxins ring systems by a Pseudomonas bacterium. Sci Nature, 1989, 76(5): 222-223.

[29]

Fortnagel P, Harms H, Wittich RM, Krohn S, Meyer H, Sinnwell V, . Metabolism of dibenzofuran by Pseudomonas sp. strain HH69 and the mixed culture HH27. Appl Environ Microbiol, 1990, 56: 1148-1156.

[30]

Fukuda K, Nagata S, Taniguchi H. Isolation and characterization of dibenzofuran-degrading bacteria. FEMS Microbiol Lett, 2002, 208: 179-185.

[31]

Fuse H, Takimura O, Murakami K, Inoue H, Yamaoka Y. Degradation of chlorinated biphenyl, dibenzofuran, and dibenzo-p-dioxin by marine bacteria that degrade biphenyl, carbazole, or dibenzofuran. Biosci Biotech Biochem, 2003, 67: 1121-1125.

[32]

Gai Z, Yu B, Li L, Wang Y, Ma C, Feng J, Deng Z, Xu P. Cometabolic degradation of dibenzofuran and dibenzothiophene by a newly isolated carbazole-degrading Sphingomonas sp. strain. Appl Environ Microbiol, 2007, 73: 2832-2838.

[33]

Ghimpetxeanu OM, Militaru M, Scippo ML. Dioxins and polychlorinated biphenyls contamination in poultry liver related to food safety—a review. Food Control, 2014, 38: 47-53.

[34]

Gioia R, Akindele AJ, Adebusoye SA, Asante KA, Tanabe S, Buekens A, Sasco AJ. Polychlorinated biphenyls (PCBs) in Africa: a review of environmental levels. Environ Sci Pollut R, 2014, 21: 6278-6289.

[35]

Grifoll M, Selifonov SA, Chapman PJ. Transformation of substituted fluorenes and fluorene analogs by Pseudomonas sp. strain F274. Appl EnvironMicrobiol, 1995, 61: 3490-3493.

[36]

Habe H, Chung JS, Lee JH, Kasuga K, Yoshida T, Nojiri H, Omori T. Degradation of chlorinated dibenzofurans and dibenzo-p-dioxins by two types of bacteria having angular dioxygenases with different features. Appl Environ Microbiol, 2001, 67: 3610-3617.

[37]

Habe H, Ide K, Yotsumoto M, Tsuji H, Yoshida T, Nojiri H, Omori T. Degradation characteristics of a dibenzofuran-degrader Terrabacter sp. strain DBF63 toward chlorinated dioxins in soil. Chemosphere, 2002, 48: 201-207.

[38]

Halden RU, Halden BG, Dwyer DF. Removal of dibenzofuran, dibenzo-p-dioxin, and 2-chlorodibenzo-p-dioxin from soils inoculated with Sphingomonas sp. strain RW1. Appl Environ Microbiol, 1999, 65: 2246-2249.

[39]

Happe B, Eltis LD, Poth H, Hedderich R, Timmis KN. Characterization of 2, 2', 3-trihydroxybiphenyl dioxygenase, an extradioldioxygenase from the dibenzofuran-and dibenzo-p-dioxin-degrading bacterium Sphingomonas sp. strain RW1. J Bacteriol, 1993, 175: 7313-7320.

[40]

Harms H, Wittich RM, Sinnwell V, Meyer H, Fortnagel P, Francke W. Transformation of dibenzo-p-dioxin by Pseudomonas sp. strain HH69. Appl Environ Microbiol, 1990, 56: 1157-1159.

[41]

Harms H, Zehnder AJ. Influence of substrate diffusion on degradation of dibenzofuran and 3-chlorodibenzofuran by attached and suspended bacteria. Appl EnvironMicrobiol, 1994, 60: 2736-2745.

[42]

Harms H, Zehnder AJ. Bioavailability of sorbed 3-chlorodibenzofuran. Appl EnvironMicrobiol, 1994, 61: 27-33.

[43]

Harms H, Wilkes H, Sinnwell V, Wittich RM, Figge K, Francke W, Fortnagel P. Transformation of 3-chlorodibenzofuran by Pseudomonas sp. HH69. FEMS Microbiol Lett, 1991, 65: 25-29.

[44]

Harms H, Wilkes H, Wittich RM, Fortnagel P. Metabolism of hydroxydibenzofurans, methoxydibenzofurans, acetoxydibenzofurans, and nitrodibenzofurans by Sphingomonas sp. strain HH69. Appl Environ Microbiol, 1995, 61: 2499-2505.

[45]

Hartmann EM, Jean Armengaud J. Shotgun proteomics suggests involvement of additional enzymes in dioxin degradation by Sphingomonas wittichii RW1 Environmental Microbiology. Special Issue: Metabolism & Biodegradation., 2014, 16: 162-176.

[46]

Hay A. Seveso: dioxin damage. Nature, 1977, 266: 7-8.

[47]

Hay A. Vietnams dioxin problem. Nature, 1978, 271: 597-598.

[48]

Hiraishi A. Biodiversity of dioxin-degrading microorganisms and potential utilization in bioremediation. Microbes Environ, 2003, 18: 105-125.

[49]

Hoekstra EJ, de Weerd H, de Leer EW, Brinkman UAT. Natural formation of chlorinated phenols, dibenzo-p-dioxins, and dibenzofurans in soil of a Douglas fir forest. Environ Sci Technol, 1999, 33: 2543-2549.

[50]

Holscher T, Krajmalnik-Brown R, Ritalahti KM, von Wintzingerode F, Gorisch H, Loffler FE, Adrian L. Multiple non-identical reductive dehalogenase homologous gene are common in Dehalococcoides. Appl Environ Microbiol, 2004, 70: 5290-5297.

[51]

Hong HB, Hwang SH, Chang YS. Biosorption of 1,2,3,4-tetrachlorodibenzo- p -dioxin and polychlorinated dibenzofurans by Bacillus pumilus. Water Res, 2000, 34: 349-353.

[52]

Hong HB, Chang YS, Nam IH, Fortnagel P, Schmidt S. Biotransformation of 2,7-dichloro- and 1,2,3,4-tetrachlorodibenzo-p-dioxin by Sphingomonas wittichii RW1. Appl Environ Microbiol, 2002, 68: 2584-2588.

[53]

Hong HB, Nam IH, Murugesan K, Kim YM, Chang YS. Biodegradation of dibenzo-p-dioxin, dibenzofuran, and chlorodibenzo-p-dioxins by Pseudomonas veronii PH-03. Biodegradation, 2004, 15: 303-313.

[54]

Huang WY, Ngo HH, Lin C, Vu CT, Kaewlaoyoong A, Boonsong T, Trana HT, Bui XT, Voa TDH, Chen JR. Aerobic co-composting degradation of highly PCDD/F-contaminated field soil. A study of bacterial community. Sci Total Environ, 2019, 660: 595-602.

[55]

Iida T, Mukouzaka Y, Nakamura K, Kudo T. Plasmid-borne genes code for an angular dioxygenase involved in dibenzofuran degradation by Terrabacter sp. strain YK3. Appl Environ Microbiol, 2002, 68: 3716-3723.

[56]

Iwasaki T, Takeda H, Miyauchi K, Yamada T, Masai E, Fukuda M. Characterization of two biphenyl dioxygenases for biphenyl-PCB degradation in a PCB degrader, Rhodococcus sp strain RHA1. Biosci Biotechnol Biohem, 2007, 71(4): 993-1002.

[57]

Jaiswal PK, Thakur IS. Isolation and characterization of dibenzofuran-degrading Serratia marcescens from alkalophilic bacterial consortium of the chemostat. Curr Microbiol, 2007, 55: 447-454.

[58]

Jaiswal PK, Kohli S, Gopal M, Thakur IS. Isolation and characterization of alkalo tolerant Pseudomonas sp. strain ISTDF1 for degradation of dibenzofuran. J Ind Microbiol Biotechnol, 2011, 38: 503-511.

[59]

Jeon JR, Murugesan K, Baldrian P, Schmidt S, Chang YS. Aerobic bacterial catabolism of persistent organic pollutants - potential impact of biotic and abiotic Interaction. Curr Opin Biotechnol, 2016, 38: 71-78.

[60]

Jin S, Zhu T, Xu X, Xu Y. Biodegradation of dibenzofuran by Janibacter terrae strain XJ-1. Curr Microbiol, 2006, 53: 30-36.

[61]

Johnson DR, Coronado E, Moreno-Forero SK, Heipieper HJ, van der Meer JR. Transcriptome and membrane fatty acid analyses reveal different strategies for responding to permeating and non-permeating solutes in the bacterium Sphingomonas wittichii. BMC Microbiol, 2011, 11: 250.

[62]

Kaiser J. Toxicology. Just how bad is dioxin?. Science, 2000, 288: 1941-1944.

[63]

Kao CM, Chen SC, Liu JK, Wu MJ. Evaluation of TCDD biodegradability under different redox conditions. Chemosphere, 2001, 44: 1447-1454.

[64]

Kao CM, Liu JK, Chen YL, Chai CT, Chen SC. Factors affecting the biodegradation of PCP by Pseudomonas mendocina NSYSU. J Hazard Mater, 2005, 124: 68-73.

[65]

Kasuga K, Nojiri H, Yamane H, Kodama T, Omori T. Cloning and characterization of the genes involved in the degradation of dibenzofuran by Terrabacter sp. strain DBF63. J Ferment Bioeng, 1997, 84: 387-399.

[66]

Kasuga K, Habe H, Chung JS, Yoshida T, Nojiri H, Yamane H, Omori T. Isolation and characterization of the genes encoding a novel oxygenase component of angular dioxygenase from the gram-positive dibenzofuran-degrader Terrabacter sp. strain DBF63. Biochem Biophys Res Comm, 2001, 283: 195-204.

[67]

Kearny PC, Ellington Woolson EA, Jr CP. Persistence and metabolism of chlorodioxins in soils. Environ Sci Technol, 1972, 6: 1017-1019.

[68]

Keim T, Francke W, Schmidt S, Fortnagel P. Catabolism of 2,7-dichloro- and 2,4,8-trichlorodibenzofuran by Sphingomonas sp strain RW1. J Ind Microbiol Biotechnol, 1999, 23: 359-363.

[69]

Kimura N, Urushigawa Y. Metabolism of dibenzo-p-dioxin and chlorinated dibenzo-p-dioxin by a gram-positive bacterium, Rhodococcus opacus SAO 101. J Biosci Bioeng, 2001, 92: 138-143.

[70]

Klees M, Hiester E, Bruckmann P, Molt K, Schmidt TC. Polychlorinated biphenyls, polychlorinated dibenzo-p-dioxins and dibenzofurans in street dust of North Rhine-Westphalia, Germany. Sci Total Environ, 2015, 511: 72-81.

[71]

Kubota M, Kawahara K, Sekiya K, Uchida T, Hattori Y, Futamata H, Hiraishi A. Nocardioides aromaticivorans sp. nov., a dibenzofuran-degrading bacterium isolated from dioxin-polluted environments. Syst Appl Microbiol, 2005, 28: 165-174.

[72]

Kulkarni PS, Crespo JG, Afonso CAM. Dioxins sources and current remediation technologies—a review. Environ Int, 2008, 34: 139-153.

[73]

Kumar P, Mohammadi M, Dhindwal S, Pham TTM, Bolin JT, Sylvestre M. Structural insights into the metabolism of 2-chlorodibenzofuran by an evolved biphenyl dioxygenase. Biochem Biophys Res Commun, 2012, 421: 757-762.

[74]

L’Abbee JB, Barriault D, Sylvestre M. Metabolism of dibenzofuran and dibenzo-p-dioxin by the biphenyl dioxygenase of Burkholderia xenovorans LB400 and Comamonas testosterone B-356. Appl Microbiol Biotechnol, 2005, 67: 506-514.

[75]

Le TT, Murugesan K, Nam IH, Jeon JR, Chang YS. Degradation of dibenzofuran via multiple dioxygenation by a newly isolated Agrobacterium sp. PH-08. J Appl Microbiol, 2014, 116: 542-553.

[76]

Li Q, Wang X, Yin G, Gai Z, Tang H, Ma C, Deng Z, Xu P. New metabolites in dibenzofuran cometabolic degradation by a biphenyl-cultivated Pseudomonas putida strain B6-2. Environ Sci Technol, 2009, 43: 8635-8642.

[77]

Lin WC, Chien GPC, Kao CM, Newman L, Wong TY, Liu JK. Biodegradation of Polychlorinated dibenzo-p-dioxins by Pseudomonas mendocina Strain NSYSU. J Environ Qual, 2014, 43: 349-357.

[78]

Lin X, Yan M, Dai A, Zhan M, Fu J, Li X, Yan J. Simultaneous suppression of PCDD/F and NOx during municipal solid waste incineration. Chemosphere, 2015, 126: 60-66.

[79]

Lin JL, Lin WC, Liu JK, Surampalli RY, Zhang TC, Kao CM. Aerobic biodegradation of OCDD by P. mendocina NSYSU: effectiveness and gene inducement studies. Water Environ Res, 2017, 89: 2113-2121.

[80]

Liu X, Wang J, Wang X, Zhu T. Simultaneous removal of PCDD/Fs and NOx from the flue gas of a municipal solid waste incinerator with a pilot plant. Chemosphere, 2015, 133: 90-96.

[81]

Maeda K, Nojiri H, Shintani M, Yoshida T, Habe H, Omori T. Complete nucleotide sequence of carbazole/dioxin-degrading plasmid pCAR1 in Pseudomonas resinovorans strain CA10 indicates its mosaicity and the presence of large catabolic transposon Tn4676. J MolBiol, 2003, 326: 21-33.

[82]

Matsumura F, Benezet HJ. Studies on the bioaccumulation and microbial degradation of 2,3,7,8-tetrachlorodibenzo-p-dioxin. Environ Health Perspect, 1973, 5: 253-258.

[83]

McLachlan MD, Horstmann M, Hinkel M. Polychlorinated dibenzo-p-dioxins and dibenzofurans in sewage sludge: Sources and fate following sludge application to land. Sci Total Environ, 1996, 185: 109-123.

[84]

Megharaj M, Wittich RM, Blasco R, Pieper DH, Timmis KN. Superior survival and degradation of dibenzo-p-dioxin and dibenzofuran in soil by soil-adapted Sphingomonas sp. strain RW1. Appl Microbiol Biotechnol, 1997, 48: 109-114.

[85]

Miller TR, Dellcher AL, Salzberg SL, Saunders E, Detter JC, Halden RU. Genome sequence of the dioxin-mineralizing bacterium Sphingomonas wittichii RW1. J Bacteriol, 2010, 192: 1601-1602.

[86]

Miyauchi K, Sukda P, Nishida T, Ito E, Matsumoto Y, Masai E, Fukuda M. Isolation of dibenzofuran-degrading bacterium, Nocardioides sp. DF412 and characterization of its dibenzofuran degradation genes. J Biosci Bioeng, 2008, 105: 628-635.

[87]

Mohammadi M, Sylvestre M. Resolving the profile of metabolites generated during oxidation of dibenzofuran and chlorodibenzofurans by the biphenyl catabolic pathway enzymes. ChemBiol, 2009, 12: 835-846.

[88]

Mohammadi M, Viger J-F, Kumar P, Barriault D, Bolin JT, Sylvestre M. Returning rieske-type oxygenases to expand substrate range. J Biol Chem, 2011, 286(31): 27612.

[89]

Moreno-Forero SK, van der Meer JR. Genome-wide analysis of Sphingomonas wittichii RW1 behaviour during inoculation and growth in contaminated sand. ISME J, 2015, 9: 150-165.

[90]

Nam JW, Nojiri H, Yoshida T, Habe H, Yamane H, Omori T. New classification system for oxygenase components involved in ring-hydroxylating oxygenations. Biosci Biotech Biochem, 2001, 65: 254-263.

[91]

Nam IH, Kim YM, Schmidt S, Chang YS. Biotransformation of 1,2,3-Tri- and 1,2,3,4,7,8 hexachlorodibenzo-p-dioxin by Sphingomonas wittichii strain RW1. Appl Environ Microbiol, 2006, 72: 112-116.

[92]

Nam IH, Kim YM, Murugesan K, Jeon JR, Chang YY, Chang YS. Bioremediation of PCDD/Fs-contaminated municipal solid waste incinerator fly ash by a potent microbial biocatalyst. J Hazard Mater, 2008, 157: 114-121.

[93]

Nojiri H, Omori T. Molecular bases of aerobic bacterial degradation of dioxins: involvement of angular dioxygenation. Biosci Biotechnol Biochem, 2002, 66: 2001-2016.

[94]

Nojiri H, Habe H, Omori T. Bacterial degradation of aromatic compounds via angular dioxygenation. J Gen Appl Microbiol, 2001, 47: 279-305.

[95]

Palanisami N, Chung SJ, Moon IS. Cerium(IV)-mediated electrochemical oxidation process for removal of polychlorinated dibenzo-p-dioxins and dibenzofurans. J Ind Eng Chem, 2015, 28: 28-31.

[96]

Parsons JR, Storms MCM. Biodegradation of chlorinated dibenzo-p-dioxins in batch and continuous cultures of strain JB1. Chemosphere, 1989, 19: 1297-1308.

[97]

Parsons JR, de Bruijne JA, Weiland AR. Biodegradation pathway of 2-chlorodibenzo-pdioxins and 2-chlorodibenzofuran in the biphenyl-utilising strain JBI. Chemosphere, 1998, 37: 1915-1922.

[98]

Peng P, Haiyan Y, Ruibao J, Li L. Biodegradation of dioxin by a newly isolated Rhodococcus sp. with the involvement of self-transmissible plasmids. Appl Microbiol Biotechnol, 2013, 97: 5585-5595.

[99]

Roggo C, Coronado E, Moreno-Forero SK, Harshman K, Weber J, van der Meer JR. Genome-wide transposon insertion scanning of environmental survival functions in the polycyclic aromatic hydrocarbon degrading bacterium Sphingomonas wittichii RW1. Environ Microbiol, 2013, 15: 2681-2695.

[100]

Rose M. Motarjemi Y. Environmental contaminants: Dioxins, furans, and dioxin-like polychlorinated biphenyls A2. Encyclopedia of food safety, 2014, Waltham: Academic Press, 315-322.

[101]

Sahni SK, Jaiswal PK, Kaushik P, Thakur IS. Characterization of alkalotolerant bacterial community by 16S rDNA-based denaturing gradient gel electrophoresis method for degradation of dibenzofuran in soil microcosm. Int Biodeter Biodegr, 2011, 65: 1073-1080.

[102]

Sato S, Nam JW, Kasuga K, Nojiri H, Yamane H, Omori T. Identification and characterization of genes encoding carbazole 1,9a-dioxygenase in Pseudomonas sp. strain CA10. J Bacteriol, 1997, 179: 4850-4858.

[103]

Schmidt A, Rothe B, Altenbuchner J, Ludwig W, Engesser KH. Characterization of three distinct extradiol dioxygenases involved in mineralization of dibenzofuran by Terrabacter sp strain DPO360. J Bacteriol, 1997, 179: 53-62.

[104]

Schreiner G, Wiedmann T, Schimmel H, Ballschmiter K. Influence of the substitution pattern on the microbial degradation of mono-to tetrachlorinated dibenzo-p-dioxins and dibenzofurans. Chemosphere, 1997, 34: 1315-1331.

[105]

Seeger M, Camara B, Hofer B. Dehalogenation, denitration, dehydroxylation, and angular attack on substituted biphenyls and related compounds by a biphenyl dioxygenase. J Bacteriol, 2001, 183(12): 3548-3555.

[106]

Selifonnov SA, Slepenkin AV, Adanin VM, Yu Nefedova M, Starovoitov II. Oxidation of dibenzofuran by Pseudomonas harboring plasmids for naphthalene degradation. Microbiol, 1992, 60: 714-717.

[107]

Seo JS, Keum YS, Li QX. Bacterial degradation of aromatic compounds. Int J Environ Res Public Health, 2009, 6: 278-309.

[108]

Squadrone S, Brizio P, Nespoli R, Stella C, Abete MC. Human dietary exposure and levels of polychlorinated dibenzo-p-dioxins (PCDDs), polychlorinated dibenzofurans (PCDFs), dioxin-like polychlorinated biphenyls (DL-PCBs) and non-dioxin-like polychlorinated biphenyls (NDL-PCBs) in free-range eggs close to a secondary aluminum smelter, Northern Italy. Environ Pollut, 2015, 206: 429-436.

[109]

Stope M, Becher D, Hammer E, Schauer F. Cometabolic ring fission of dibenzofuran by Gram-negative and Gram-positive biphenyl-utilizing bacteria. Appl Microbiol Biotechnol, 2002, 59: 62-67.

[110]

Sukda P, Gouda N, Ito E, Miyauchi K, Masai E, Fukuda M. Characterization of a transcriptional regulatory gene involved in dibenzofuran degradation by Nocardioides sp. strain DF412. Biosci Biotechnol Biochem, 2009, 73: 508-516.

[111]

Suzuki S, Hiraishi A. Novosphingobium naphthalenivorans sp. nov., a naphthalene-degrading bacterium isolated from polychlorinated-dioxin-contaminated environments. J Gen Appl Microbiol, 2007, 53: 221-228.

[112]

Suzuki YM, Nakamura Y, Otsuka Y, Suzuki N, Ohyama K, Kawakami T, . 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) degradation by the thermophilic Geobacillus sp. UZO 3. J Environ Biotechnol, 2016, 2: 105-108.

[113]

Suzuki Y, Nakamura M, Otsuka Y, Suzuki N, Ohyama K, Kawakami T, Sato-Izawa K, Navarro RR, Hishiyama S, Inoue K, Kameyama T, Takahashi A, Katayama Y. Cloning and sequencing of the gene encoding the enzyme for the reductive cleavage of diaryl ether bonds of 2,3,7,8-tetrachlorodibenzo-p-dioxin in Geobacillus thermodenitrificans UZO 3. J Biosci Bioeng, 2018

[114]

Thanh LTH, Thi TVN, Shintani M, Moriuchi R, Dohra H, Loc NH, Kimbara K. Isolation and characterization of a moderate thermophilic Paenibacillus naphthalenovorans strain 4B1 capable of degrading dibenzofuran from dioxin-contaminated soil in Vietnam. J Biosci Bioeng, 2019, 128: 571-577.

[115]

Townsend DI. Change of isomer ratio and fate of polychlorinated- p -dioxins in the environment. Chemosphere, 1983, 12: 637-643.

[116]

Tu YT, Liu JK, Lin WC, Lin JL, Kao CM. Enhanced anaerobic biodegradation of OCDD-contaminated soils by Pseudomonas mendocina NSYSU: microcosm, pilot-scale, and gene studies. J Hazard Mater, 2014, 278: 433-443.

[117]

Tue NM, Goto A, Takahashi S, Itai T, Asante KA, Kunisue T, Tanabe S. Release of chlorinated, brominated and mixed halogenated dioxin-related compounds to soils from open burning of e-waste in Agbogbloshie (Accra, Ghana). J Hazard Mater, 2016, 302: 151-157.

[118]

Vidali M. Bioremeiation. An overview. Pure Appl Chem, 2001, 73(7): 1163-1172.

[119]

Wang Y, Oyaizu H. Enhanced remediation of dioxins-spiked soil by a plant–microbe system using a dibenzofuran-degrading Comamonas sp. and Trifoliumrepens L. Chemosphere, 2011, 85: 1109-1114.

[120]

Wang Y, Yamazoe A, Suzuki S, Liu CT, Aono T, Oyaizu H. Isolation and characterization of dibenzofuran-degrading Comamonas sp. strains isolated from white clover roots. CurrMicrobiol, 2004, 49: 288-294.

[121]

Wang C, Chen Q, Wang R, Shi C, Yan X, He J, Hong Q, Li S. A novel angular dioxygenase gene cluster encoding 3-phenoxybenzoate 1′,2′-dioxygenase in Sphingobium wenxiniae JZ-1. Appl Environ Microbiol, 2014, 80(13): 3811-3818.

[122]

Weber R, Tysklind M, Gaus C. Dioxin—contemporary and future challenges of historical legacies. Environ Sci Pollut Res, 2008, 15: 96-100.

[123]

Wilkes H, Wittich RM, Timmis KN, Fortnagel P, Francke W. Degradation of chlorinated dibenzofurans and dibenzo-p-dioxins by Sphingomonas sp. strain RW1. Appl Environ Microbiol, 1996, 62: 367-371.

[124]

Wittich RM. Degradation of dioxin-like compounds by microorganisms. Appl Microbiol Biotechnol, 1998, 49: 489-499.

[125]

Wittich RM, Wilkes H, Sinnwell V, Francke W, Fortnagel P. Metabolism of dibenzo-p-dioxin by Sphingomonas sp. strain RW1. Appl Environ Microbiol, 1992, 58: 1005-1010.

[126]

Wittich RM, Strömpl C, Moore ERB, Blasco R, Timmis KN. Interaction of Sphingomonas and Pseudomonas strains in the degradation of chlorinated dibenzofurans. J Ind Microbiol Biotechnol, 1999, 23: 353-358.

[127]

Wu JH, Chen WY, Kuo HC, Li YM. Redox fluctuations shape the soil microbiome in the hypoxic bioremediation of octachlorinated dibenzodioxin- and dibenzofurancontaminated soil. Environ Pollut, 2019, 248: 506-515.

[128]

Xu P, Yu B, Li FL, Cai XF, Ma CQ. Microbial degradation of sulfur, nitrogen and oxygen heterocycles. Trends Microbiol, 2006, 14: 398-405.

[129]

Yamazoe A, Yagi O, Oyaizu H. Degradation of polycyclic aromatic hydrocarbons by a newly isolated dibenzofuran-utilizing Janibacter sp. strain YY-1. Appl Microbiol Biotechnol, 2004, 65: 211-221.

[130]

Yoshida N, Takahashi N, Hiraishi A. Phylogenetic characterization of a polychlorinated dioxin dechlorinating microbial community by use of microcosm studies. Appl Environ Microbiol, 2005, 71: 4325-4334.

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