Turn on the Mtr pathway genes under pLacI promoter in Shewanella oneidensis MR-1

I-Son Ng , Yanlan Guo , Yunli Zhou , Jhe-Wei Wu , Shih-I Tan , Ying-Chen Yi

Bioresources and Bioprocessing ›› 2018, Vol. 5 ›› Issue (1) : 35

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Bioresources and Bioprocessing ›› 2018, Vol. 5 ›› Issue (1) : 35 DOI: 10.1186/s40643-018-0221-9
Research

Turn on the Mtr pathway genes under pLacI promoter in Shewanella oneidensis MR-1

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Abstract

Background

Shewanella genus is famous for applications like electron transfer in microbe fuel cells and bioremediation of heavy metals through the Mtr pathway. A potential way to enhance the electron genesis ability of Shewanella is to express exogenous mtr genes via recombinant DNA technology. Thus, to design and develop expression vectors capable of replicating in Shewanella and enhance the genetic toolbox of the same is important.

Result

In this study, a plasmid construct with a replication origin, repB, and pLacI promoter is reported for the first time to drive the expression of green fluorescent protein in S. oneidensis MR-1. Based on the same vector, the Mtr pathway genes mtrA, mtrC, and mtrCAB were also successfully expressed in MR-1. The recombinant strains had higher ferric reductase activity compared to the wild type. The highest enzymatic activity of 508.33 U/L in genetic Shewanella with mtrC gene is obtained, which is 1.53-fold higher than that of wild strain. The plasmids were stable up to 90 generations.

Conclusion

We have demonstrated an expression system based on pLacI promoter and repB ori in Shewanella. Consequently, the combination of repB and pLacI will have great potential in Shewanella to turn on expression of different genes constitutively.

Keywords

Shewanella / Mtr pathway / Green fluorescent protein / Shuttle vector / Ferric reductase

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I-Son Ng, Yanlan Guo, Yunli Zhou, Jhe-Wei Wu, Shih-I Tan, Ying-Chen Yi. Turn on the Mtr pathway genes under pLacI promoter in Shewanella oneidensis MR-1. Bioresources and Bioprocessing, 2018, 5(1): 35 DOI:10.1186/s40643-018-0221-9

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References

[1]

Ashiuchi M, Zakaria MM, Sakaguchi Y, Yagi T. Sequence analysis of a cryptic plasmid from Flavobacterium sp. KP1, a psychrophilic bacterium. FEMS Microbiol Lett, 1999, 170: 243-249.

[2]

Beliaev AS, Saffarini DA. Shewanella putrefaciens mtrB encodes an outer membrane protein required for Fe(III) and Mn(IV) reduction. J Bacteriol, 1998, 180: 6293-6297.

[3]

Beliaev AS, Saffarini DA, McLaughlin JL, Hunnicutt D. MtrC, an outer membrane decahaem c cytochrome required for metal reduction in Shewanella putrefaciens MR-1. Mol Microbiol, 2001, 39: 722-730.

[4]

Bretschger O, Obraztsova A, Sturm CA, Chang IS, Gorby YA, Reed SB, Culley DE, Reardon CL, Barua S, Romine MF, Zhou J, Beliaev AS, Bouhenni R, Saffarini D, Mansfeld F, Kim BH, Fredrickson JK, Nealson KH. Current production and metal oxide reduction by Shewanella oneidensis MR-1 wild type and mutants. Appl Environ Microbiol, 2007, 73: 7003-7012.

[5]

Chaturvedi V, Verma P. Microbial fuel cell: a green approach for the utilization of waste for the generation of bioelectricity. Bioresour Bioprocess, 2016, 3: 38.

[6]

Chen BY, Hong J, Ng IS, Wang YM, Liu SQ, Lin B, Ni C. Deciphering simultaneous bioelectricity generation and reductive decolorization using mixed-culture microbial fuel cells in salty media. J Taiwan Inst Chem Eng, 2013, 44: 446-453.

[7]

Heidelberg JF, Paulsen IT, Nelson KE, Gaidos EJ, Nelson WC, Read TD. Genome sequence of the dissimilatory metal ion–reducing bacterium Shewanella oneidensis. Nature Biotechnol, 2002, 20: 1118-1123.

[8]

Jana S, Deb JK. Strategies for efficient production of heterologous proteins in Escherichia coli. Appl Microbiol Biotechnol, 2005, 67: 289-298.

[9]

Jayasinghe N, Franks A, Nevin KP, Mahadevan R. Metabolic modeling of spatial heterogeneity of biofilms in microbial fuel cells reveals substrate limitations in electrical current generation. Biotechnol J, 2014, 9: 1350-1361.

[10]

Jensen HM, Albers AE, Malley KR, Londer YY, Cohen BE, Helms BA, Weigele P, Groves JT, Ajo-Franklin CM. Engineering of a synthetic electron conduit in living cells. Proc Natl Acad Sci USA, 2010, 107: 19213-19218.

[11]

Kües U, Stahl U. Replication of plasmids in Gram-negative bacteria. Microbiol Rev, 1989, 53: 491-516.

[12]

Lederberg J. Cell genetics and hereditary symbiosis. Physiol Rev, 1952, 32: 403-430.

[13]

Milewska K, Węgrzyn G, Szalewska-Pałasz A. Transformation of Shewanella baltica with ColE1-like and P1 plasmids and their maintenance during bacterial growth in cultures. Plasmid, 2015, 81: 42-49.

[14]

Mordkovich NN, Manuvera VA, Veiko VP, Debabov VG. Uridine phosphorylase from Shewanella oneidensis MR-1: heterological expression, regulation, transcription, and properties. Appl Biochem Micro, 2012, 48: 716-722.

[15]

Mordkovich NN, Voeikova TA, Novikova LM, Smirnov IA, Soldatov PE, Tyurin-Kuz’min AY, Smolenskaya TS, Veiko VP, Shakulov RS, Debabov VG. Effect of NAD+-dependent formate dehydrogenase on anaerobic respiration of Shewanella oneidensis MR-1. Microbiology, 2013, 82: 404-409.

[16]

Myers CR, Myers JM. Replication of plasmids with the p15A origin in Shewanella putrefaciens MR-1. Lett Appl Microbiol, 1997, 24: 221-225.

[17]

Nealson KH, Scott J. Ecophysiology of the genus Shewanella. The prokaryotes, 2006, New York: Springer, 1133-1151.

[18]

Ng IS, Chen T, Lin R, Zhang X, Ni C, Shun D. Decolorization of textile azo dye and Congo red by an isolated strain of the dissimilatory manganese-reducing bacterium Shewanella xiamenensis BC01. Appl Microbiol Biotechnol, 2014, 98: 2297-2308.

[19]

Ng IS, Zheng X, Wang N, Chen BY, Zhang X, Lu Y. Copper response of Proteus hauseri based on proteomic and genetic expression and cell morphology analyses. Appl Biochem Biotechnol, 2014, 173: 1057-1072.

[20]

Ng IS, Hsueh CC, Chen BY. Electron transport phenomena of electroactive bacteria in microbial fuel cells: a review of Proteus hauseri. Bioresour Bioprocess, 2017, 4: 53.

[21]

Nováková J, Izsáková A, Grivalský T, Ottmann C, Farkašovský M. Improved method for high-efficiency electrotransformation of Escherichia coli with the large BAC plasmids. Folia Microbiol (Praha), 2013, 59: 53-61.

[22]

Ozawa K, Yasukawa F, Fujiwara Y, Akutsu H. A simple, rapid, and highly efficient gene expression system for multiheme cytochromes c. Biosci Biotechnol Biochem, 2001, 65: 185-189.

[23]

Pirbadian S, Barchinger SE, Leung KM, Byun HS, Jangir Y, Bouhenni RA, Reed SB, Romine MF, Saffarini DA, Shi L, Gorby YA, Golbeck JH, Barchinger SE, EI-Nagger MY. Shewanella oneidensis MR-1 nanowires are outer membrane and periplasmic extensions of the extracellular electron transport components. Proc Natl Acad Sci USA, 2014, 111: 12883-12888.

[24]

Rachkevych N, Sybirna K, Boyko S, Boretsky Y, Sibirny A. Improving the efficiency of plasmid transformation in Shewanella oneidensis MR-1 by removing ClaI restriction site. J Microbiol Methods, 2014, 99: 35-37.

[25]

Saffarini DA, Nealson KH. Sequence and genetic characterization of etrA, an fnr analog that regulates anaerobic respiration in Shewanella putrefaciens MR-1. J Bacteriol, 1993, 175: 7938-7944.

[26]

Shi L, Rosso KM, Zachara JM, Fredrickson JK. Mtr extracellular electron-transfer pathways in Fe(III)-reducing or Fe(II)-oxidizing bacteria: a genomic perspective. Biochem Soc Trans, 2012, 40: 1261-1267.

[27]

Stookey LL. Ferrozine-new spectrophotometric reagent for iron. Anal Chem, 1970, 42: 779-781.

[28]

Studier FW, Rosenberg AH, Dunn JJ, Dubendorff JW. Use of T7 RNA polymerase to direct expression of cloned genes. Method Enzynol, 1990, 185: 60-89.

[29]

Summers DK, Sherratt DJ. Multimerization of high copy number plasmids causes instability: CoIE1 encodes a determinant essential for plasmid monomerization and stability. Cell, 1984, 36: 1097-1103.

[30]

Takahashi S, Miyahara M, Kouzuma A, Watanabe K. Electricity generation from rice bran in microbial fuel cells. Bioresour Bioprocess, 2016, 3: 50.

[31]

Thomas PE, Ryan D, Levin W. An improved staining procedure for the detection of the peroxidase activity of cytochrome P-450 on sodium dodecyl sulfate polyacrylamide gels. Anal Biochem, 1976, 75: 168-176.

[32]

Werbowy K, Cieśliński H, Kur J. Characterization of a cryptic plasmid pSFKW33 from Shewanella sp. 33B. Plasmid, 2009, 62: 44-49.

[33]

Wu JW, Ng IS. Bio fabrication of gold nanoparticles by Shewanella species. Bioresour Bioprocess, 2017, 4: 50.

[34]

Yang Y, Ding Y, Hu Y, Cao B, Rice SA, Kjelleberg S, Song H. Enhancing bidirectional electron transfer of Shewanella oneidensis by a synthetic flavin pathway. ACS Synth Biol, 2015, 4: 815-823.

[35]

Yin J, Sun L, Dong Y, Chi X, Zhu W, Qi SH, Gao H. Expression of blaA underlies unexpected ampicillin-induced cell lysis of Shewanella oneidensis. PLoS ONE, 2013, 8: e60460.

[36]

You C, Zhang YHP. Simple cloning and DNA assembly in Escherichia coli by prolonged overlap extension PCR. Methods Mol Biol, 2014, 1116: 183-192.

[37]

Yuan J, Wei B, Shi M, Gao H. Functional assessment of EnvZ/OmpR two-component system in Shewanella oneidensis. PLoS ONE, 2011, 6: e23701.

[38]

Zhou Y, Ng IS. Explored a cryptic plasmid pSXM33 from Shewanella xiamenensis BC01 and construction as the shuttle vector. Biotechnol Bioprocess Eng, 2016, 21: 68-78.

Funding

Ministry of Science and Technology, Taiwan(105-2221-E-006-225-MY3)

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