Background (S)-(−)-N,N-Dimethyl-3-hydroxy-3-(2-thienyl)-1-propanamine (DHTP) is a key intermediate for the preparation of (S)-duloxetine, an important antidepressant drug. However, so far, the catalytic efficiency of (S)-DHTP synthesis by asymmetric bioreduction is yet limited. The present study aims to develop an efficient system for synthesis of (S)-DHTP by bioreduction.
Results Various recombinant carbonyl reductases were evaluated for asymmetric reduction of N,N-dimethyl-3-keto-3-(2-thienyl)-1-propanamine (DKTP) to produce (S)-DHTP. The NADPH-dependent carbonyl reductase CR2 was identified as the suitable candidate, giving (S)-DHTP in absolute configuration. Then the fusion protein involving CR2 and glucose dehydrogenase (CR2-L-GDH) was constructed to further improve cofactor regeneration and resulted catalytic efficiency of the enzymatic reduction. By studying the effects of reaction conditions involving cofactor regeneration, suitable catalytic system was achieved for CR2-L-GDH catalyzing (S)-DHTP synthesis. Consequently, (S)-DHTP (>99.9% e.e.) with yield of 97.66% was obtained from 20 g L−1 DKTP within 8-h reaction, employing 40 g L−1 glucose and 0.1 mmol L−1 NADP+ to drive the cofactor regeneration, resulting in the space–time yield of 2.44 g L−1 h−1.
Conclusion Optically pure (S)-DHTP with improved yield was obtained by fusion enzyme CR2-L-GDH. Fusion enzyme-mediated biocatalytic system would be promising to enhance reaction efficiency of enzyme-coupled system for preparation of optically active alcohols.
| [1] |
Bymaster FP, Dreshfield-Ahmad LJ, Threlkeld PG, Shaw JL, Thompson L, Nelson DL, Hemrick-Luecke SK, Wong DT. Comparative affinity of duloxetine and venlafaxine for serotonin and norepinephrine transporters in vitro and in vivo, human serotonin receptor subtypes, and other neuronal receptors. Neuropsychopharmacology, 2001, 25: 871-880.
|
| [2] |
Calam E, Gonzalez-Roca E, Fernandez MR, Dequin S, Pares X, Virgili A, Biosca JA. Enantioselective synthesis of vicinal (R, R)-diols by Saccharomyces cerevisiae butanediol dehydrogenase. Appl Environ Microbiol, 2016, 82: 1706-1721.
|
| [3] |
Castellana M, Wilson MZ, Xu Y, Joshi P, Cristea IM, Rabinowitz JD, Gitai Z, Wingreen NS. Enzyme clustering accelerates processing of intermediates through metabolic channeling. Nat Biotechnol, 2014, 32: 1011-1018.
|
| [4] |
Conrado RJ, Varner JD, DeLisa MP. Engineering the spatial organization of metabolic enzymes: mimicking nature’s synergy. Curr Opin Biotechnol, 2008, 19: 492-499.
|
| [5] |
Costello CA, Payson RA, Menke MA, Larson JL, Brown KA, Tanner JE, Kaiser RE, Hershberger CL, Zmijewski MJ. Purification, characterization, cDNA cloning and expression of a novel ketoreductase from Zygosaccharomyces rouxii. Eur J Biochem, 2000, 267: 5493-5501.
|
| [6] |
Dueber JE, Wu GC, Malmirchegini GR, Moon TS, Petzold CJ, Ullal AV, Prather KLJ, Keasling JD. Synthetic protein scaffolds provide modular control over metabolic flux. Nat Biotechnol, 2009, 27: 753-759.
|
| [7] |
Farrow SC, Hagel JM, Beaudoin GA, Burns DC, Facchini PJ. Stereochemical inversion of (S)-reticuline by a cytochrome P450 fusion in opium poppy. Nat Chem Biol, 2015, 11: 728-732.
|
| [8] |
Gao C, Zhang L, Xie Y, Hu C, Zhang Y, Li L, Wang Y, Ma C, Xu P. Production of (3S)-acetoin from diacetyl by using stereoselective NADPH-dependent carbonyl reductase and glucose dehydrogenase. Bioresour Technol, 2013, 137: 111-115.
|
| [9] |
Guo R, Nie Y, Mu XQ, Xu Y, Xiao R. Genomic mining-based identification of novel stereospecific aldo-keto reductases toolbox from Candida parapsilosis for highly enantioselective reduction of carbonyl compounds. J Mol Catal B Enzym, 2014, 105: 66-73.
|
| [10] |
Hall M, Bommarius AS. Enantioenriched compounds via enzyme-catalyzed redox reactions. Chem Rev, 2011, 111: 4088-4110.
|
| [11] |
Huisman GW, Collier SJ. On the development of new biocatalytic processes for practical pharmaceutical synthesis. Curr Opin Chem Biol, 2013, 17: 284-292.
|
| [12] |
Kataoka M, Kotaka A, Hasegawa A, Wada M, Yoshizumi A, Nakamori S, Shimizu S. Old yellow enzyme from Candida macedoniensis catalyzes the stereospecific reduction of the C=C bond of ketoisophorone. Biosci Biotechnol Biochem, 2002, 66: 2651-2657.
|
| [13] |
Kataoka M, Delacruz-Hidalgo A-R, Akond M, Sakuradani E, Kita K, Shimizu S. Gene cloning and overexpression of two conjugated polyketone reductases, novel aldo-keto reductase family enzymes, of Candida parapsilosis. Appl Microbiol Biotechnol, 2004, 64: 359-366.
|
| [14] |
Kataoka M, Hoshino-Hasegawa A, Thiwthong R, Higuchi N, Ishige T, Shimizu S. Gene cloning of an NADPH-dependent menadione reductase from Candida macedoniensis, and its application to chiral alcohol production. Enzyme Microb Technol, 2006, 38: 944-951.
|
| [15] |
Kizaki N, Yasohara Y, Hasegawa J, Wada M, Kataoka M, Shimizu S. Synthesis of optically pure ethyl (S)-4-chloro-3-hydroxybutanoate by Escherichia coli transformant cells coexpressing the carbonyl reductase and glucose dehydrogenase genes. Appl Microbiol Biotechnol, 2001, 55: 590-595.
|
| [16] |
Lalonde J. Highly engineered biocatalysts for efficient small molecule pharmaceutical synthesis. Curr Opin Biotechnol, 2016, 42: 152-158.
|
| [17] |
Li B, Nie Y, Mu XQ, Xu Y. De novo construction of multi-enzyme system for one-pot deracemization of (R, S)-1-phenyl-1,2-ethanediol by stereoinversion of (S)-enantiomer to the corresponding counterpart. J Mol Catal B Enzym, 2016, 129: 21-28.
|
| [18] |
Liu W, Wang P. Cofactor regeneration for sustainable enzymatic biosynthesis. Biotechnol Adv, 2007, 25: 369-384.
|
| [19] |
Munoz Solano D, Hoyos P, Hernaiz MJ, Alcantara AR, Sanchez-Montero JM. Industrial biotransformations in the synthesis of building blocks leading to enantiopure drugs. Bioresour Technol, 2012, 115: 196-207.
|
| [20] |
Nakamura K, Yamanaka R, Matsuda T, Harada T. Recent developments in asymmetric reduction of ketones with biocatalysts. Tetrahedron Asymmetry, 2003, 14: 2659-2681.
|
| [21] |
Nealon CM, Musa MM, Patel JM, Phillips RS. Controlling substrate specificity and stereospecificity of alcohol dehydrogenases. ACS Catal, 2015, 5: 2100-2114.
|
| [22] |
Ni Y, Xu JH. Biocatalytic ketone reduction: a green and efficient access to enantiopure alcohols. Biotechnol Adv, 2012, 30: 1279-1288.
|
| [23] |
Nie Y, Xu Y, Wang H, Xu N, Xiao R, Sun Z. Complementary selectivity to (S)-1-phenyl-1,2-ethanediol-forming Candida parapsilosis by expressing its carbonyl reductase in Escherichia coli for (R)-specific reduction of 2-hydroxyacetophenone. Biocatal Biotransform, 2008, 26: 210-219.
|
| [24] |
Nie Y, Xiao R, Xu Y, Montelione GT. Novel anti-Prelog stereospecific carbonyl reductases from Candida parapsilosis for asymmetric reduction of prochiral ketones. Org Biomol Chem, 2011, 9: 4070-4078.
|
| [25] |
Noey EL, Tibrewal N, Jiménez-Osés G, Osuna S, Park J, Bond CM, Cascio D, Liang J, Zhang X, Huisman GW, Tang Y, Houk KN. Origins of stereoselectivity in evolved ketoreductases. Proc Natl Acad Sci USA, 2015, 112: E7065-E7072.
|
| [26] |
Ou ZM, Zhao HB, Tang L, Zhang W, Yang GS. Asymmetric synthesis of duloxetine intermediate (S)-(-)-3-N-methylamino-1-(2-thienyl)-1-propanol using immobilized Saccharomyces cerevisiae in liquid-core sodium alginate/chitosan/sodium alginate microcapsules. Bioprocess Biosyst Eng, 2014, 37: 2243-2250.
|
| [27] |
Patel RN. Microbial/enzymatic synthesis of chiral pharmaceutical intermediates. Curr Opin Drug Discov Devel, 2003, 6: 902-920.
|
| [28] |
Patel RN. Synthesis of chiral pharmaceutical intermediates by biocatalysis. Coord Chem Rev, 2008, 252: 659-701.
|
| [29] |
Pazmino DET, Snajdrova R, Baas BJ, Ghobrial M, Mihovilovic MD, Fraaije MW. Self-sufficient Baeyer–Villiger monooxygenases: effective coenzyme regeneration for biooxygenation by fusion engineering. Angew Chem Int Ed, 2008, 47: 2275-2278.
|
| [30] |
Pesti J, DiCosimo R. Recent progress in enzymatic resolution and desymmetrization of pharmaceuticals and their intermediates. Curr Opin Drug Discov Dev, 2003, 6: 884-901.
|
| [31] |
Pollard DJ, Woodley JM. Biocatalysis for pharmaceutical intermediates: the future is now. Trends Biotechnol, 2007, 25: 66-73.
|
| [32] |
Prachayasittikul V, Ljung S, Isarankura-Na-Ayudhya C, Bulow L. NAD(H) recycling activity of an engineered bifunctional enzyme galactose dehydrogenase/lactate dehydrogenase. Int J Biol Sci, 2006, 2: 10-16.
|
| [33] |
Ren Z-Q, Liu Y, Pei X-Q, Wang H-B, Wu Z-L. Bioreductive production of enantiopure (S)-duloxetine intermediates catalyzed with ketoreductase ChKRED15. J Mol Catal B Enzym, 2015, 113: 76-81.
|
| [34] |
Silva VD, Stambuk BU, da Graça Nascimento M. Asymmetric reduction of (4R)-(−)-carvone catalyzed by baker’s yeast in aqueous mono-and biphasic systems. J Mol Catal B Enzym, 2012, 77: 98-104.
|
| [35] |
Soni P, Banerjee U. Biotransformations for the production of the chiral drug (S)-duloxetine catalyzed by a novel isolate of Candida tropicalis. Appl Microbiol Biotechnol, 2005, 67: 771-777.
|
| [36] |
Suehrer I, Haslbeck M, Castiglione K. Asymmetric synthesis of a fluoxetine precursor with an artificial fusion protein of a ketoreductase and a formate dehydrogenase. Process Biochem, 2014, 49: 1527-1532.
|
| [37] |
Sun Z, Lonsdale R, Ilie A, Li G, Zhou J, Reetz MT. Catalytic asymmetric reduction of difficult-to-reduce ketones: triple-code saturation mutagenesis of an alcohol dehydrogenase. ACS Catal, 2016, 6: 1598-1605.
|
| [38] |
Tang C-G, Lin H, Zhang C, Liu Z-Q, Yang T, Wu Z-L. Highly enantioselective bioreduction of N-methyl-3-oxo-3-(thiophen-2-yl) propanamide for the production of (S)-duloxetine. Biotechnol Lett, 2011, 33: 1435-1440.
|
| [39] |
Wada M, Yoshizumi A, Furukawa Y, Kawabata H, Ueda M, Takagi H, Nakamori S. Cloning and overexpression of the Exiguobacterium sp F42 gene encoding a new short chain dehydrogenase, which catalyzes the stereoselective reduction of ethyl 3-oxo-3-(2-thienyl) propanoate to ethyl (S)-3-hydroxy-3-(2-thienyl) propanoate. Biosci Biotechnol Biochem, 2004, 68: 1481-1488.
|
| [40] |
Wang LJ, Li CX, Ni Y, Zhang J, Liu X, Xu JH. Highly efficient synthesis of chiral alcohols with a novel NADH-dependent reductase from Streptomyces coelicolor. Bioresour Technol, 2011, 102: 7023-7028.
|
| [41] |
Weckbecker A, Hummel W. Cloning, expression, and characterization of an (R)-specific alcohol dehydrogenase from Lactobacillus kefir. Biocatal Biotransform, 2006, 24: 380-389.
|
| [42] |
Wohlgemuth R. Asymmetric biocatalysis with microbial enzymes and cells. Curr Org Microbiol, 2010, 13: 283-292.
|
| [43] |
Yamamoto H, Mitsuhashi K, Kimoto N, Matsuyama A, Esaki N, Kobayashi Y. A novel NADH-dependent carbonyl reductase from Kluyveromyces aestuarii and comparison of NADH-regeneration system for the synthesis of ethyl (S)-4-chloro-3-hydroxybutanoate. Biosci Biotechnol Biochem, 2004, 68: 638-649.
|
| [44] |
Ye Q, Cao H, Yan M, Cao F, Zhang Y, Li X, Xu L, Chen Y, Xiong J, Ouyang P, Ying H. Construction and co-expression of a polycistronic plasmid encoding carbonyl reductase and glucose dehydrogenase for production of ethyl (S)-4-chloro-3-hydroxybutanoate. Bioresour Technol, 2010, 101: 6761-6767.
|
| [45] |
Zhang J, Tao S, Zhang B, Wu X, Chen Y. Microparticle-based strategy for controlled release of substrate for the biocatalytic preparation of l-homophenylalanine. ACS Catal, 2014, 4: 1584-1587.
|
| [46] |
Zhang D, Chen X, Chi J, Feng J, Wu Q, Zhu D. Semi-rational engineering a carbonyl reductase for the enantioselective reduction of β-amino ketones. ACS Catal, 2015, 5: 2452-2457.
|
| [47] |
Zhao H, van der Donk WA. Regeneration of cofactors for use in biocatalysis. Curr Opin Biotechnol, 2003, 14: 583-589.
|
Funding
National High Technology Research and Development Program of China(2015AA021004)
National Natural Science Foundation of China(21376107)
Natural Science Foundation of Jiangsu Province(BK20151124)
High-end Foreign Experts Recruitment Program(GDT20153200044)
Program for Advanced Talents within Six Industries of Jiangsu Province(2015-NY-007)
Fundamental Research Funds for the Central Universities(JUSRP51504)