Pbs2 regulates late-stage macroautophagy in Saccharomyces cerevisiae

Jianing Song , Haolin Zhang , Xingyu Cao , Zizhang Ren , Chao Tian , Miao Jia , Meiling Wu , Xiaoli Wang , Juan Wang

Animal Models and Experimental Medicine ›› 2025, Vol. 8 ›› Issue (7) : 1321 -1327.

PDF
Animal Models and Experimental Medicine ›› 2025, Vol. 8 ›› Issue (7) : 1321 -1327. DOI: 10.1002/ame2.70042
SHORT COMMUNICATION

Pbs2 regulates late-stage macroautophagy in Saccharomyces cerevisiae

Author information +
History +
PDF

Abstract

Autophagy is crucial for maintaining cellular homeostasis and is linked to various diseases. In Saccharomyces cerevisiae, the Polymyxin B Sensitivity 2 (Pbs2) protein is a member of the mitogen-activated protein kinase (MAPK) family and plays a role in mitophagy. To explore the potential role of Pbs2 in macroautophagy, we engineered wild-type and PBS2-deficient cells using plasmid construction and yeast transformation techniques, followed by a series of autophagy assays. First, after nitrogen starvation, the levels of autophagic activity were evaluated with the classical GFP-Atg8 cleavage assay and the Pho8Δ60 activity assay at different time points. Deleting PBS2 significantly decreased both GFP-Atg8 protein cleavage and Pho8Δ60 activity, indicating that Pbs2 is essential for macroautophagy. Furthermore, the influence of Pbs2 on macroautophagy was shown to be independent of Hog1, a well-known downstream factor of Pbs2. Second, the Atg8 lipidation assay demonstrated that Atg8 lipidation levels increased upon PBS2 deletion, suggesting that Pbs2 acts after Atg8 lipidation. Third, the proteinase K protection assay indicated that the loss of PBS2 led to a higher proportion of closed autophagosomes, implying that Pbs2 impacts the later stages of macroautophagy following autophagosome closure. In conclusion, Pbs2 regulates the late stages of macroautophagy induced by nitrogen starvation.

Keywords

autophagy / Hog1 / MAPK / Pbs2

Cite this article

Download citation ▾
Jianing Song, Haolin Zhang, Xingyu Cao, Zizhang Ren, Chao Tian, Miao Jia, Meiling Wu, Xiaoli Wang, Juan Wang. Pbs2 regulates late-stage macroautophagy in Saccharomyces cerevisiae. Animal Models and Experimental Medicine, 2025, 8(7): 1321-1327 DOI:10.1002/ame2.70042

登录浏览全文

4963

注册一个新账户 忘记密码

References

[1]

Noda NN, Inagaki F. Mechanisms of autophagy. Annu Rev Biophys. 2015; 44: 101-122.

[2]

Yang Z, Klionsky DJ. Eaten alive: a history of macroautophagy. Nat Cell Biol. 2010; 12(9): 814-822.

[3]

Nakatogawa H, Suzuki K, Kamada Y, Ohsumi Y. Dynamics and diversity in autophagy mechanisms: lessons from yeast. Nat Rev Mol Cell Biol. 2009; 10(7): 458-467.

[4]

Suzuki K, Kubota Y, Sekito T, Ohsumi Y. Hierarchy of Atg proteins in pre-autophagosomal structure organization. Genes Cells. 2007; 12(2): 209-218.

[5]

Cao W, Li J, Yang K, Cao D. An overview of autophagy: mechanism, regulation and research progress. Bull Cancer. 2021; 108(3): 304-322.

[6]

Lamb CA, Yoshimori T, Tooze SA. The autophagosome: origins unknown, biogenesis complex. Nat Rev Mol Cell Biol. 2013; 14(12): 759-774.

[7]

Qi M, Elion EA. MAP kinase pathways. J Cell Sci. 2005; 118(pt 16): 3569-3572.

[8]

Sridharan S, Jain K, Basu A. Regulation of autophagy by kinases. Cancers (Basel). 2011; 3(2): 2630-2654.

[9]

Knippschild U, Gocht A, Wolff S, Huber N, Löhler J, Stöter M. The casein kinase 1 family: participation in multiple cellular processes in eukaryotes. Cell Signal. 2005; 17(6): 675-689.

[10]

Tatebayashi K, Saito H. Two activating phosphorylation sites of Pbs2 MAP2K in the yeast HOG pathway are differentially dephosphorylated by four PP2C phosphatases Ptc1-Ptc4. J Biol Chem. 2023; 299(4): 104569.

[11]

Tatebayashi K, Yamamoto K, Tomida T, et al. Osmostress enhances activating phosphorylation of Hog1 MAP kinase by mono-phosphorylated Pbs2 MAP2K. EMBO J. 2020; 39(5): e103444.

[12]

Mao K, Wang K, Zhao M, Xu T, Klionsky DJ. Two MAPK-signaling pathways are required for mitophagy in Saccharomyces cerevisiae. J Cell Biol. 2011; 193(4): 755-767.

[13]

Aoki Y, Kanki T, Hirota Y, et al. Phosphorylation of Serine 114 on Atg32 mediates mitophagy. Mol Biol Cell. 2011; 22(17): 3206-3217.

[14]

Onishi M, Yamano K, Sato M, Matsuda N, Okamoto K. Molecular mechanisms and physiological functions of mitophagy. EMBO J. 2021; 40(3): e104705.

[15]

Muller M, Lu K, Reichert AS. Mitophagy and mitochondrial dynamics in Saccharomyces cerevisiae. Biochim Biophys Acta. 2015; 1853(10 pt B): 2766-2774.

[16]

Hernandez-Elvira M, Salas-Delgado G, Kawasaki L, et al. The yeast two-component SLN1 branch of the HOG pathway and the scaffolding activity of Pbs2 modulate the response to endoplasmic reticulum stress induced by tunicamycin. Int Microbiol. 2022; 25(3): 639-647.

[17]

Klionsky DJ. Monitoring autophagy in yeast: the Pho8Delta60 assay. Methods Mol Biol. 2007; 390: 363-371.

[18]

Zhou F, Zou S, Chen Y, et al. A Rab5 GTPase module is important for autophagosome closure. PLoS Genet. 2017; 13(9): e1007020.

[19]

Araki Y, Kira S, Noda T. Quantitative assay of macroautophagy using Pho8 big up tri, open60 assay and GFP-cleavage assay in yeast. Methods Enzymol. 2017; 588: 307-321.

[20]

Delorme-Axford E, Guimaraes RS, Reggiori F, Klionsky DJ. The yeast Saccharomyces cerevisiae: an overview of methods to study autophagy progression. Methods. 2015; 75: 3-12.

[21]

Noda T, Klionsky DJ. The quantitative Pho8Delta60 assay of nonspecific autophagy. Methods Enzymol. 2008; 451: 33-42.

[22]

Nair U, Yen WL, Mari M, et al. A role for Atg8-PE deconjugation in autophagosome biogenesis. Autophagy. 2012; 8(5): 780-793.

[23]

Nakatogawa H, Ohsumi Y. SDS-PAGE techniques to study ubiquitin-like conjugation systems in yeast autophagy. Ubiquitin Fam Modif Proteasome. 2012; 832: 519-529.

[24]

Saito H, Tatebayashi K. Regulation of the osmoregulatory HOG MAPK cascade in yeast. J Biochem. 2004; 136(3): 267-272.

[25]

Elbaz-Alon Y, Rosenfeld-Gur E, Shinder V, Futerman AH, Geiger T, Schuldiner M. A dynamic Interface between vacuoles and mitochondria in yeast. Dev Cell. 2014; 30(1): 95-102.

[26]

Xiaolong M, Li Y, Dixiong Y, et al. The vacuole and mitochondria patch (vclamp) protein Vam6 is crucial for autophagy in Candida albicans. Mycopathologia. 2021; 186: 477-486.

[27]

Lee J, Tatebayashi K, Levin DE. Acetic acid-induced stress granules function As scaffolding complexes for Hog1 activation by Pbs2. J Cell Biol. 2025; 224(5): e202409072.

[28]

Stephan J, Franke J, Ehrenhofer-Murray AE. Chemical genetic screen in fission yeast reveals roles for vacuolar acidification, mitochondrial fission, and cellular GMP levels in lifespan extension. Aging Cell. 2013; 12: 574-583.

RIGHTS & PERMISSIONS

2025 The Author(s). Animal Models and Experimental Medicine published by John Wiley & Sons Australia, Ltd on behalf of The Chinese Association for Laboratory Animal Sciences.

AI Summary AI Mindmap
PDF

11

Accesses

0

Citation

Detail

Sections
Recommended

AI思维导图

/