Subtomogram averaging by cryo electron tomography using CRYO ARM™ 300 II for purified and cellular samples

Fumiaki Makino , Haruaki Yanagisawa , Fabian Eisenstein , Tomoko Miyata , Miki Kinoshita , Masahide Kikkawa , Keiichi Namba

AIMS Biophysics ›› 2026, Vol. 13 ›› Issue (2) : 131 -142.

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AIMS Biophysics ›› 2026, Vol. 13 ›› Issue (2) :131 -142. DOI: 10.3934/biophy.2026008
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Subtomogram averaging by cryo electron tomography using CRYO ARM™ 300 II for purified and cellular samples
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Abstract

Cryo electron tomography (cryo-ET) enables three-dimensional visualization of biological macromolecules in their near-native environments, bridging the gap between structural and cellular biology. In this study, we evaluated high-resolution subtomogram averaging (STA) using a cryo-TEM (CRYO ARMTM 300 II, JEOL) and PACEtomo software system for both single-particle analysis (SPA) type grids and lamellae prepared by cryo-focused ion beam (cryo-FIB) milling (JIB-4700F, JEOL). Using mouse apoferritin and E. coli ribosomes in thin vitreous ice film, resolutions of 2.04 Å and 2.86 Å were achieved, respectively. Using cryo-FIB lamellae of Salmonella cells, in situ ribosome structures were resolved to 8.2 Å resolution.

Keywords

cryo-EM / cryo-ET / STA / cryo-FIB-SEM / CryoLameller / CRYO ARM / structural cell biology

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Fumiaki Makino, Haruaki Yanagisawa, Fabian Eisenstein, Tomoko Miyata, Miki Kinoshita, Masahide Kikkawa, Keiichi Namba. Subtomogram averaging by cryo electron tomography using CRYO ARM™ 300 II for purified and cellular samples. AIMS Biophysics, 2026, 13 (2) : 131-142 DOI:10.3934/biophy.2026008

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